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Lsi05G017500 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G017500
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionEmbryo sac development arrest protein
Genome locationchr05:24899649..24900029
RNA-Seq ExpressionLsi05G017500
SyntenyLsi05G017500
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN56835.1 hypothetical protein Csa_009887 [Cucumis sativus]4.9e-5586.92Show/hide
Query:  MSFHFHNRGLLSAGPSRKRKEPSAPAAPKAGEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARDEASPSAAT----QWKKPKSEAAPPEILKKEHQIQS
        MSFHFH+RGLLSAGPS+KRKEPS P+A KAGEPSV SNRLLAGYMAYEFLTKGTL GRKFDP RDEA+PSAA+    QWKKPKS+AAPPEILKKEHQIQS
Subjt:  MSFHFHNRGLLSAGPSRKRKEPSAPAAPKAGEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARDEASPSAAT----QWKKPKSEAAPPEILKKEHQIQS

Query:  YAEVATILKTTGAHISGIVNPTQLGRWLQK
        YAEVA ILKTTG+HISGIVNPTQLGRWLQK
Subjt:  YAEVATILKTTGAHISGIVNPTQLGRWLQK

XP_008438490.1 PREDICTED: uncharacterized protein LOC103483571 [Cucumis melo]3.5e-5387.02Show/hide
Query:  MSFHFHNRGLLSAGPSRKRKEPSAPAAP-KAGEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARDEASPSAA--TQWKKPKSEAAPPEILKKEH--QIQ
        MSFHFH+RGLLSAGPS+KRKEPS PA P KAGEPSVLSNRLLAGYMAYEFLTKGTL GRKFDP RDEA+PS+A  +QWKKPK EAAPPEILKKEH  QIQ
Subjt:  MSFHFHNRGLLSAGPSRKRKEPSAPAAP-KAGEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARDEASPSAA--TQWKKPKSEAAPPEILKKEH--QIQ

Query:  SYAEVATILKTTGAHISGIVNPTQLGRWLQK
        SYAEVA ILKTTG+HISGIVNPTQLGRWLQK
Subjt:  SYAEVATILKTTGAHISGIVNPTQLGRWLQK

XP_022924296.1 uncharacterized protein LOC111431827 [Cucurbita moschata]2.0e-4883.33Show/hide
Query:  MSFHFHNRGLLSAGPSRKRKEPSAPAAPKAGEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARDEASPSAATQWKKPKSEAAPPEILKKEHQIQSYAEV
        MSFHFH+RGLL AGPSRKRKE   PAA KA EP V SNRLLAGYMAYEFLTKGT+LGR+F+P R EA PSAA QWKK KSEAAPPEILKKEHQIQSY EV
Subjt:  MSFHFHNRGLLSAGPSRKRKEPSAPAAPKAGEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARDEASPSAATQWKKPKSEAAPPEILKKEHQIQSYAEV

Query:  ATILKTTGAHISGIVNPTQLGRWLQK
        ATILKTTG HI  IVNPTQLGRWLQK
Subjt:  ATILKTTGAHISGIVNPTQLGRWLQK

XP_022979583.1 uncharacterized protein LOC111479265 [Cucurbita maxima]2.2e-4782.54Show/hide
Query:  MSFHFHNRGLLSAGPSRKRKEPSAPAAPKAGEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARDEASPSAATQWKKPKSEAAPPEILKKEHQIQSYAEV
        MSFHFH RGLL  GPSRKRKE   PAA KA EP V SNRLLAGYMAYEFLTKGT+LGR+F+P + EA PSAA QWKK KSEAAPPEILKKEHQIQSY EV
Subjt:  MSFHFHNRGLLSAGPSRKRKEPSAPAAPKAGEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARDEASPSAATQWKKPKSEAAPPEILKKEHQIQSYAEV

Query:  ATILKTTGAHISGIVNPTQLGRWLQK
        ATILKTTGAHI  IVNPTQLGRWLQK
Subjt:  ATILKTTGAHISGIVNPTQLGRWLQK

XP_023526927.1 uncharacterized protein LOC111790299 [Cucurbita pepo subsp. pepo]5.3e-4984.13Show/hide
Query:  MSFHFHNRGLLSAGPSRKRKEPSAPAAPKAGEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARDEASPSAATQWKKPKSEAAPPEILKKEHQIQSYAEV
        MSFHFH+RGLL AGPSRKRKE   PAA KA EPSV SNRLLAGYMAYEFLTKGT+LGR+F+P R EA PSAA QWKK KSEAAPPEILKKEHQIQSY EV
Subjt:  MSFHFHNRGLLSAGPSRKRKEPSAPAAPKAGEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARDEASPSAATQWKKPKSEAAPPEILKKEHQIQSYAEV

Query:  ATILKTTGAHISGIVNPTQLGRWLQK
        ATILKTTG HI  IVNPTQLGRWLQK
Subjt:  ATILKTTGAHISGIVNPTQLGRWLQK

TrEMBL top hitse value%identityAlignment
A0A0A0L4C1 Uncharacterized protein2.4e-5586.92Show/hide
Query:  MSFHFHNRGLLSAGPSRKRKEPSAPAAPKAGEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARDEASPSAAT----QWKKPKSEAAPPEILKKEHQIQS
        MSFHFH+RGLLSAGPS+KRKEPS P+A KAGEPSV SNRLLAGYMAYEFLTKGTL GRKFDP RDEA+PSAA+    QWKKPKS+AAPPEILKKEHQIQS
Subjt:  MSFHFHNRGLLSAGPSRKRKEPSAPAAPKAGEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARDEASPSAAT----QWKKPKSEAAPPEILKKEHQIQS

Query:  YAEVATILKTTGAHISGIVNPTQLGRWLQK
        YAEVA ILKTTG+HISGIVNPTQLGRWLQK
Subjt:  YAEVATILKTTGAHISGIVNPTQLGRWLQK

A0A1S3AWH5 uncharacterized protein LOC1034835711.7e-5387.02Show/hide
Query:  MSFHFHNRGLLSAGPSRKRKEPSAPAAP-KAGEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARDEASPSAA--TQWKKPKSEAAPPEILKKEH--QIQ
        MSFHFH+RGLLSAGPS+KRKEPS PA P KAGEPSVLSNRLLAGYMAYEFLTKGTL GRKFDP RDEA+PS+A  +QWKKPK EAAPPEILKKEH  QIQ
Subjt:  MSFHFHNRGLLSAGPSRKRKEPSAPAAP-KAGEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARDEASPSAA--TQWKKPKSEAAPPEILKKEH--QIQ

Query:  SYAEVATILKTTGAHISGIVNPTQLGRWLQK
        SYAEVA ILKTTG+HISGIVNPTQLGRWLQK
Subjt:  SYAEVATILKTTGAHISGIVNPTQLGRWLQK

A0A5A7U1L2 Uncharacterized protein1.7e-5387.02Show/hide
Query:  MSFHFHNRGLLSAGPSRKRKEPSAPAAP-KAGEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARDEASPSAA--TQWKKPKSEAAPPEILKKEH--QIQ
        MSFHFH+RGLLSAGPS+KRKEPS PA P KAGEPSVLSNRLLAGYMAYEFLTKGTL GRKFDP RDEA+PS+A  +QWKKPK EAAPPEILKKEH  QIQ
Subjt:  MSFHFHNRGLLSAGPSRKRKEPSAPAAP-KAGEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARDEASPSAA--TQWKKPKSEAAPPEILKKEH--QIQ

Query:  SYAEVATILKTTGAHISGIVNPTQLGRWLQK
        SYAEVA ILKTTG+HISGIVNPTQLGRWLQK
Subjt:  SYAEVATILKTTGAHISGIVNPTQLGRWLQK

A0A6J1E960 uncharacterized protein LOC1114318279.7e-4983.33Show/hide
Query:  MSFHFHNRGLLSAGPSRKRKEPSAPAAPKAGEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARDEASPSAATQWKKPKSEAAPPEILKKEHQIQSYAEV
        MSFHFH+RGLL AGPSRKRKE   PAA KA EP V SNRLLAGYMAYEFLTKGT+LGR+F+P R EA PSAA QWKK KSEAAPPEILKKEHQIQSY EV
Subjt:  MSFHFHNRGLLSAGPSRKRKEPSAPAAPKAGEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARDEASPSAATQWKKPKSEAAPPEILKKEHQIQSYAEV

Query:  ATILKTTGAHISGIVNPTQLGRWLQK
        ATILKTTG HI  IVNPTQLGRWLQK
Subjt:  ATILKTTGAHISGIVNPTQLGRWLQK

A0A6J1IWN8 uncharacterized protein LOC1114792651.1e-4782.54Show/hide
Query:  MSFHFHNRGLLSAGPSRKRKEPSAPAAPKAGEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARDEASPSAATQWKKPKSEAAPPEILKKEHQIQSYAEV
        MSFHFH RGLL  GPSRKRKE   PAA KA EP V SNRLLAGYMAYEFLTKGT+LGR+F+P + EA PSAA QWKK KSEAAPPEILKKEHQIQSY EV
Subjt:  MSFHFHNRGLLSAGPSRKRKEPSAPAAPKAGEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARDEASPSAATQWKKPKSEAAPPEILKKEHQIQSYAEV

Query:  ATILKTTGAHISGIVNPTQLGRWLQK
        ATILKTTGAHI  IVNPTQLGRWLQK
Subjt:  ATILKTTGAHISGIVNPTQLGRWLQK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04000.1 unknown protein2.7e-1138.83Show/hide
Query:  SAPAAPKAGEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARDEASPSAATQWKKPKSEAAPPEILKKEHQIQSYAEVATILKTTGAHISGIVNPTQLGR
        S  ++  A EP   +  +LAGY+++E+LT+GTL G +++ AR +A  S      KP     P E  + E + + Y EVA +L++ GA + GIVNP QL R
Subjt:  SAPAAPKAGEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARDEASPSAATQWKKPKSEAAPPEILKKEHQIQSYAEVATILKTTGAHISGIVNPTQLGR

Query:  WLQ
        +L+
Subjt:  WLQ

AT3G23440.1 embryo sac development arrest 62.0e-1441.07Show/hide
Query:  GPSRKRKEPSAPAAPKAGEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARDEASPSAATQWKKPKSEAAPPEILKKEHQIQSYAEVATILKTTGAHISG
        G SRKRK+  +     A       N LLAGYMA+E+LT GT+LGRK      E  P  +          +P +  + +   QSY+EVA++ KT G H+ G
Subjt:  GPSRKRKEPSAPAAPKAGEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARDEASPSAATQWKKPKSEAAPPEILKKEHQIQSYAEVATILKTTGAHISG

Query:  IVNPTQLGRWLQ
        +VNPTQL +W+Q
Subjt:  IVNPTQLGRWLQ

AT5G44060.1 unknown protein1.4e-1543.27Show/hide
Query:  PSAPAAPKAGEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARDEASPSAATQWKKPKSEAAPPEILKKEHQIQSYAEVATILKTTGAHISGIVNPTQLG
        P+  A     EP V SN+LLAGY+A+EFL  GTL G  ++P + +A P   TQ   P+      +I   +H+ + Y EVA IL+  G H+ GIVNP+QL 
Subjt:  PSAPAAPKAGEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARDEASPSAATQWKKPKSEAAPPEILKKEHQIQSYAEVATILKTTGAHISGIVNPTQLG

Query:  RWLQ
        R+L+
Subjt:  RWLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTCCATTTCCACAACCGTGGGCTCTTATCGGCTGGGCCGTCCAGAAAGCGTAAGGAGCCATCCGCGCCGGCGGCTCCTAAAGCCGGTGAGCCATCGGTTTTATC
GAACCGGCTTCTAGCCGGGTACATGGCTTATGAGTTTCTAACAAAAGGGACTCTGTTGGGCCGGAAGTTCGACCCGGCTCGAGACGAAGCAAGCCCATCCGCCGCCACCC
AGTGGAAGAAGCCGAAGTCGGAAGCCGCACCGCCGGAGATCTTGAAGAAAGAGCATCAGATTCAGAGTTACGCTGAGGTGGCAACCATCCTGAAGACTACTGGAGCCCAC
ATATCCGGAATCGTCAACCCGACCCAACTGGGTCGGTGGCTTCAAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTCCATTTCCACAACCGTGGGCTCTTATCGGCTGGGCCGTCCAGAAAGCGTAAGGAGCCATCCGCGCCGGCGGCTCCTAAAGCCGGTGAGCCATCGGTTTTATC
GAACCGGCTTCTAGCCGGGTACATGGCTTATGAGTTTCTAACAAAAGGGACTCTGTTGGGCCGGAAGTTCGACCCGGCTCGAGACGAAGCAAGCCCATCCGCCGCCACCC
AGTGGAAGAAGCCGAAGTCGGAAGCCGCACCGCCGGAGATCTTGAAGAAAGAGCATCAGATTCAGAGTTACGCTGAGGTGGCAACCATCCTGAAGACTACTGGAGCCCAC
ATATCCGGAATCGTCAACCCGACCCAACTGGGTCGGTGGCTTCAAAAGTGA
Protein sequenceShow/hide protein sequence
MSFHFHNRGLLSAGPSRKRKEPSAPAAPKAGEPSVLSNRLLAGYMAYEFLTKGTLLGRKFDPARDEASPSAATQWKKPKSEAAPPEILKKEHQIQSYAEVATILKTTGAH
ISGIVNPTQLGRWLQK