; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G017520 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G017520
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionmultiple organellar RNA editing factor 2, chloroplastic-like
Genome locationchr05:24917126..24924890
RNA-Seq ExpressionLsi05G017520
SyntenyLsi05G017520
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
GO:0006412 - translation (biological process)
GO:0016554 - cytidine to uridine editing (biological process)
GO:0080156 - mitochondrial mRNA modification (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001383 - Ribosomal protein L28
IPR026569 - Ribosomal protein L28/L24
IPR034704 - L28p-like
IPR037045 - Peptidase S8 propeptide/proteinase inhibitor I9 superfamily
IPR037147 - Ribosomal protein L28/L24 superfamily
IPR039206 - MORF/ORRM1/DAG-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018807.1 Multiple organellar RNA editing factor 2, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]5.2e-12092.5Show/hide
Query:  MALSLLRAMASASTSTARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMAPL
        MALS+LRAM     STARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRS PSASR+TSIRCRVNR+GNSSYSP NSNSNFSDRPPTEMAPL
Subjt:  MALSLLRAMASASTSTARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMAPL

Query:  FPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVN
        FPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKV+GSEEEAKKKIYNVSCERYFGFGCE+DEETSNKLEGLPGVLFVLPDSYVDPE KDYGAELFVN
Subjt:  FPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVN

Query:  GEIVQRSPERQRRVDPQPQRVQDRPKYSDRTRYVRRRENM
        GEIVQRSPERQRRV+PQPQR QDRP+Y+DRTR+VRRRENM
Subjt:  GEIVQRSPERQRRVDPQPQRVQDRPKYSDRTRYVRRRENM

XP_022149612.1 multiple organellar RNA editing factor 2, chloroplastic-like [Momordica charantia]1.8e-12093.39Show/hide
Query:  MALSLLRAM--ASASTSTARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMA
        MALSLLRAM  ASASTSTARLSLL +RL SSSTTLT PPSPP+LTL RRSLPPLSHAVRSIPSASRFT IRCRVNRSGNS YSPLNSNSNFSDRPPTEMA
Subjt:  MALSLLRAM--ASASTSTARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMA

Query:  PLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELF
        PLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCE+DEETSNKLEG+PGVLFVLPDSYVDPEYKDYGAELF
Subjt:  PLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELF

Query:  VNGEIVQRSPERQRRVDPQPQRVQDRPKYSDRTRYVRRRENM
        VNGEIVQRSPERQRRV+PQPQR QDRP+Y+DRTRYVRRRENM
Subjt:  VNGEIVQRSPERQRRVDPQPQRVQDRPKYSDRTRYVRRRENM

XP_022924432.1 multiple organellar RNA editing factor 2, chloroplastic-like isoform X1 [Cucurbita moschata]5.2e-12092.5Show/hide
Query:  MALSLLRAMASASTSTARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMAPL
        MALS+LRAM     STARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRS PSASR+TSIRCRVNR+GNSSYSP NSNSNFSDRPPTEMAPL
Subjt:  MALSLLRAMASASTSTARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMAPL

Query:  FPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVN
        FPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKV+GSEEEAKKKIYNVSCERYFGFGCE+DEETSNKLEGLPGVLFVLPDSYVDPE KDYGAELFVN
Subjt:  FPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVN

Query:  GEIVQRSPERQRRVDPQPQRVQDRPKYSDRTRYVRRRENM
        GEIVQRSPERQRRV+PQPQR QDRP+Y+DRTR+VRRRENM
Subjt:  GEIVQRSPERQRRVDPQPQRVQDRPKYSDRTRYVRRRENM

XP_022979370.1 multiple organellar RNA editing factor 2, chloroplastic-like [Cucurbita maxima]3.7e-11891.25Show/hide
Query:  MALSLLRAMASASTSTARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMAPL
        MALS+LRAM     STARLSLLHRRLFSSSTTLTHPPSPP LTLCRRSLPPLSH VRS PSASR+TSIRCRVNR+GNSSYSP NSNSNFSDRPPTEMAPL
Subjt:  MALSLLRAMASASTSTARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMAPL

Query:  FPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVN
        FPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKV+GSEEEA KKIYNVSCERYFGFGCE+DEETSNKLEGLPGVLFVLPDSYVDPE KDYGAELFVN
Subjt:  FPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVN

Query:  GEIVQRSPERQRRVDPQPQRVQDRPKYSDRTRYVRRRENM
        GEIVQRSPERQRRV+PQPQR QDRP+Y+DRTR+VRRRENM
Subjt:  GEIVQRSPERQRRVDPQPQRVQDRPKYSDRTRYVRRRENM

XP_038896418.1 multiple organellar RNA editing factor 2, chloroplastic-like [Benincasa hispida]2.5e-12294.65Show/hide
Query:  MALSLLRAMASASTS----TARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTE
        MALSLLRAMASAS S    TARLSLL RRLFSSS+TLTHPPS PSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTE
Subjt:  MALSLLRAMASASTS----TARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTE

Query:  MAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAE
        MAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAE
Subjt:  MAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAE

Query:  LFVNGEIVQRSPERQRRVDPQPQRVQDRPKYSDRTRYVRRREN
        LFVNGEIVQR PERQRRV+PQPQR QDRP+Y+DRTRYVRRREN
Subjt:  LFVNGEIVQRSPERQRRVDPQPQRVQDRPKYSDRTRYVRRREN

TrEMBL top hitse value%identityAlignment
A0A1S3AW51 multiple organellar RNA editing factor 2, chloroplastic4.6e-11489.3Show/hide
Query:  MALSLLRAMASA--STSTARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMA
        M LSLLRAMASA  STS ARLS+L RRLFSSS+TLTHPPSP S TL RRSLP LSHAVRSIPS+SR TS RC  +R GNSSYSPLNSNSNFS+RPPTEMA
Subjt:  MALSLLRAMASA--STSTARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMA

Query:  PLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELF
        PLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKK+IYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAEL 
Subjt:  PLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELF

Query:  VNGEIVQRSPERQRRVDPQPQRVQDRPKYSDRTRYVRRRENMS
        VNGEIVQRSPERQRRV PQPQR  DRPKY+DRTRYVRRRENM+
Subjt:  VNGEIVQRSPERQRRVDPQPQRVQDRPKYSDRTRYVRRRENMS

A0A5D3CZF4 Multiple organellar RNA editing factor 24.6e-11489.3Show/hide
Query:  MALSLLRAMASA--STSTARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMA
        M LSLLRAMASA  STS ARLS+L RRLFSSS+TLTHPPSP S TL RRSLP LSHAVRSIPS+SR TS RC  +R GNSSYSPLNSNSNFS+RPPTEMA
Subjt:  MALSLLRAMASA--STSTARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMA

Query:  PLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELF
        PLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKK+IYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAEL 
Subjt:  PLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELF

Query:  VNGEIVQRSPERQRRVDPQPQRVQDRPKYSDRTRYVRRRENMS
        VNGEIVQRSPERQRRV PQPQR  DRPKY+DRTRYVRRRENM+
Subjt:  VNGEIVQRSPERQRRVDPQPQRVQDRPKYSDRTRYVRRRENMS

A0A6J1D8H1 multiple organellar RNA editing factor 2, chloroplastic-like8.6e-12193.39Show/hide
Query:  MALSLLRAM--ASASTSTARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMA
        MALSLLRAM  ASASTSTARLSLL +RL SSSTTLT PPSPP+LTL RRSLPPLSHAVRSIPSASRFT IRCRVNRSGNS YSPLNSNSNFSDRPPTEMA
Subjt:  MALSLLRAM--ASASTSTARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMA

Query:  PLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELF
        PLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCE+DEETSNKLEG+PGVLFVLPDSYVDPEYKDYGAELF
Subjt:  PLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELF

Query:  VNGEIVQRSPERQRRVDPQPQRVQDRPKYSDRTRYVRRRENM
        VNGEIVQRSPERQRRV+PQPQR QDRP+Y+DRTRYVRRRENM
Subjt:  VNGEIVQRSPERQRRVDPQPQRVQDRPKYSDRTRYVRRRENM

A0A6J1E8X5 multiple organellar RNA editing factor 2, chloroplastic-like isoform X12.5e-12092.5Show/hide
Query:  MALSLLRAMASASTSTARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMAPL
        MALS+LRAM     STARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRS PSASR+TSIRCRVNR+GNSSYSP NSNSNFSDRPPTEMAPL
Subjt:  MALSLLRAMASASTSTARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMAPL

Query:  FPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVN
        FPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKV+GSEEEAKKKIYNVSCERYFGFGCE+DEETSNKLEGLPGVLFVLPDSYVDPE KDYGAELFVN
Subjt:  FPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVN

Query:  GEIVQRSPERQRRVDPQPQRVQDRPKYSDRTRYVRRRENM
        GEIVQRSPERQRRV+PQPQR QDRP+Y+DRTR+VRRRENM
Subjt:  GEIVQRSPERQRRVDPQPQRVQDRPKYSDRTRYVRRRENM

A0A6J1IT23 multiple organellar RNA editing factor 2, chloroplastic-like1.8e-11891.25Show/hide
Query:  MALSLLRAMASASTSTARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMAPL
        MALS+LRAM     STARLSLLHRRLFSSSTTLTHPPSPP LTLCRRSLPPLSH VRS PSASR+TSIRCRVNR+GNSSYSP NSNSNFSDRPPTEMAPL
Subjt:  MALSLLRAMASASTSTARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMAPL

Query:  FPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVN
        FPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKV+GSEEEA KKIYNVSCERYFGFGCE+DEETSNKLEGLPGVLFVLPDSYVDPE KDYGAELFVN
Subjt:  FPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVN

Query:  GEIVQRSPERQRRVDPQPQRVQDRPKYSDRTRYVRRRENM
        GEIVQRSPERQRRV+PQPQR QDRP+Y+DRTR+VRRRENM
Subjt:  GEIVQRSPERQRRVDPQPQRVQDRPKYSDRTRYVRRRENM

SwissProt top hitse value%identityAlignment
O22793 Multiple organellar RNA editing factor 2, chloroplastic1.7e-8978.14Show/hide
Query:  RLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQ
        R   S+ TL  PP  PS          + +    +  ++RF SIRC  NRSG S+YSPLNS SNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQ
Subjt:  RLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQ

Query:  QMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVDPQPQRVQDR
        QMIDCYIQTLAKVVGSEEEAKK+IYNVSCERY GFGCE+DEETS KLEGLPGVLFVLPDSYVDPE KDYGAELFVNGEIVQRSPERQRRV+PQPQR QDR
Subjt:  QMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVDPQPQRVQDR

Query:  PKYSDRTRYVRRREN
        P+Y+DRTRY RRREN
Subjt:  PKYSDRTRYVRRREN

O82169 Multiple organellar RNA editing factor 6, mitochondrial2.1e-8773.36Show/hide
Query:  STSTARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIV
        S STA  S + +R FS+S  +  P   PS  + RR  P + HAV  IP+ +RFT+IR R++RSG  SYSPL S SNFSDRPPTEMAPLFPGCDYEHWLIV
Subjt:  STSTARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIV

Query:  MDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQR
        M+KPGGE A KQQMIDCY+QTLAK+VGSEEEA+KKIYNVSCERYFGFGCE+DEETSNKLEGLPGVLFVLPDSYVDPE+KDYGAELFVNGE+V R PERQR
Subjt:  MDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQR

Query:  R-VDPQPQRVQDRPKYSDRTRYVRRRENM
        R V+   QR  D+PKY DR R VRRRENM
Subjt:  R-VDPQPQRVQDRPKYSDRTRYVRRRENM

P30956 50S ribosomal protein L28, chloroplastic1.8e-4362.67Show/hide
Query:  TMAASVVLGFTPATSSGVMALSSTKLHFRTKANSQLGFLTSQLAGIKISSNHSLISPSPISTAPLRPPLQPVARRVCPFTGKKANKKNLVSFSNHKTKKL
        TM A + L     +S    +++      ++K +S+L F+TSQL+G+KISS H + S +P+S  P +P LQPVARR+CPFTGKK+N+ N VS SNHKTKKL
Subjt:  TMAASVVLGFTPATSSGVMALSSTKLHFRTKANSQLGFLTSQLAGIKISSNHSLISPSPISTAPLRPPLQPVARRVCPFTGKKANKKNLVSFSNHKTKKL

Query:  QFVNLQYKKVWWEAGKRFVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
        QFVNLQYK++WWEAGKR+VKLRLSTKA+KTIEKNGLDAVAKKAGIDL K+
Subjt:  QFVNLQYKKVWWEAGKRFVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE

P82245 50S ribosomal protein L28, chloroplastic1.4e-4381.36Show/hide
Query:  SQLGFLTSQLAGIKISSNHSL-ISPSPISTAPLRPPLQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQFVNLQYKKVWWEAGKRFVKLRLSTKALKTIE
        S+LGFLTSQL+GI+IS +    I   PIS APL+P LQPVARR+CPFTGKK+NK N VS SNHKTK+LQFVNLQYK+VWWEAGKRFVKLRLSTKALKTIE
Subjt:  SQLGFLTSQLAGIKISSNHSL-ISPSPISTAPLRPPLQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQFVNLQYKKVWWEAGKRFVKLRLSTKALKTIE

Query:  KNGLDAVAKKAGIDLRKE
        KNGLDAVAKKAGIDLRKE
Subjt:  KNGLDAVAKKAGIDLRKE

Q9C7Y2 Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial3.5e-8772.61Show/hide
Query:  MALSLLRAMASASTSTARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMAPL
        MA +L R+ AS  T         +RL S+S   T  PS PS  L RRS P  SHAV  I S +RFT+IR R++RSG  SYSPL S SNFSDR PTEMAPL
Subjt:  MALSLLRAMASASTSTARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMAPL

Query:  FPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVN
        FPGCDYEHWLIVMDKPGGE ATKQQMIDCY+QTLAK++GSEEEAKKKIYNVSCERYFGFGCE+DEETSNKLEGLPGVLF+LPDSYVD E KDYGAELFVN
Subjt:  FPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVN

Query:  GEIVQRSPERQRR-VDPQPQRVQDRPKYSDRTRYVRRRENM
        GEIVQR PERQR+ ++   QR  D+PKY D+TRYVRRRENM
Subjt:  GEIVQRSPERQRR-VDPQPQRVQDRPKYSDRTRYVRRRENM

Arabidopsis top hitse value%identityAlignment
AT1G32580.1 plastid developmental protein DAG, putative2.5e-8872.61Show/hide
Query:  MALSLLRAMASASTSTARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMAPL
        MA +L R+ AS  T         +RL S+S   T  PS PS  L RRS P  SHAV  I S +RFT+IR R++RSG  SYSPL S SNFSDR PTEMAPL
Subjt:  MALSLLRAMASASTSTARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMAPL

Query:  FPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVN
        FPGCDYEHWLIVMDKPGGE ATKQQMIDCY+QTLAK++GSEEEAKKKIYNVSCERYFGFGCE+DEETSNKLEGLPGVLF+LPDSYVD E KDYGAELFVN
Subjt:  FPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVN

Query:  GEIVQRSPERQRR-VDPQPQRVQDRPKYSDRTRYVRRRENM
        GEIVQR PERQR+ ++   QR  D+PKY D+TRYVRRRENM
Subjt:  GEIVQRSPERQRR-VDPQPQRVQDRPKYSDRTRYVRRRENM

AT2G33430.1 differentiation and greening-like 11.2e-9078.14Show/hide
Query:  RLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQ
        R   S+ TL  PP  PS          + +    +  ++RF SIRC  NRSG S+YSPLNS SNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQ
Subjt:  RLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQ

Query:  QMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVDPQPQRVQDR
        QMIDCYIQTLAKVVGSEEEAKK+IYNVSCERY GFGCE+DEETS KLEGLPGVLFVLPDSYVDPE KDYGAELFVNGEIVQRSPERQRRV+PQPQR QDR
Subjt:  QMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVDPQPQRVQDR

Query:  PKYSDRTRYVRRREN
        P+Y+DRTRY RRREN
Subjt:  PKYSDRTRYVRRREN

AT2G33450.1 Ribosomal L28 family5.1e-4168.38Show/hide
Query:  MALSSTKLHFRTKANSQLGFLTSQLAGIKISSNHSLISPSPI---STAPLRPPLQP-VARRVCPFTGKKANKKNLVSFSNHKTKKLQFVNLQYKKVWWEA
        M  S+  +   T  + +LGFLTSQL+G++IS      +PS +    + P  P +QP VARR+CPFTGKKAN+ N VSFSNHKTKKLQFVNLQYK+VWWEA
Subjt:  MALSSTKLHFRTKANSQLGFLTSQLAGIKISSNHSLISPSPI---STAPLRPPLQP-VARRVCPFTGKKANKKNLVSFSNHKTKKLQFVNLQYKKVWWEA

Query:  GKRFVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
        GKRFVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK+
Subjt:  GKRFVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE

AT2G35240.1 plastid developmental protein DAG, putative1.5e-8873.36Show/hide
Query:  STSTARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIV
        S STA  S + +R FS+S  +  P   PS  + RR  P + HAV  IP+ +RFT+IR R++RSG  SYSPL S SNFSDRPPTEMAPLFPGCDYEHWLIV
Subjt:  STSTARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWLIV

Query:  MDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQR
        M+KPGGE A KQQMIDCY+QTLAK+VGSEEEA+KKIYNVSCERYFGFGCE+DEETSNKLEGLPGVLFVLPDSYVDPE+KDYGAELFVNGE+V R PERQR
Subjt:  MDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQR

Query:  R-VDPQPQRVQDRPKYSDRTRYVRRRENM
        R V+   QR  D+PKY DR R VRRRENM
Subjt:  R-VDPQPQRVQDRPKYSDRTRYVRRRENM

AT3G06790.2 plastid developmental protein DAG, putative1.3e-3644.13Show/hide
Query:  MASASTSTARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNS-NFSDRPPTEMAPLFPGCDYE
        MA  ST     +LL++ L SS+   ++  S P+L+   R   PL   V S  ++     I  R   SG S YSPLN  S N+S+RPP E   L  GCDYE
Subjt:  MASASTSTARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNS-NFSDRPPTEMAPLFPGCDYE

Query:  HWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEIVQRS
        HWLIVM+    +  T+++MI+ Y++TL  V+G EEEAKKKIY+V    Y GFG  + EE S K++ LPGVL+VLPDSY+D   KDYG +L+V G+++ R 
Subjt:  HWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEIVQRS

Query:  PER---QRRVDPQPQRVQDRPKYSDR--TRYVRRRE-NMSPNSIIQP
          R   QR   P+P     RP+Y  R  T  V RRE +M  +S + P
Subjt:  PER---QRRVDPQPQRVQDRPKYSDR--TRYVRRRE-NMSPNSIIQP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTATCCCTTCTTCGAGCTATGGCTTCCGCCTCCACCTCCACTGCCCGCCTCTCTCTTCTTCACAGACGCCTCTTCTCCTCCTCAACTACTCTTACACATCCTCC
TTCACCCCCTTCTCTCACTCTCTGCCGTCGATCTCTCCCTCCCCTTTCCCATGCCGTTCGATCTATCCCTTCCGCCTCCAGGTTCACCTCTATTCGTTGCCGCGTCAATC
GCTCAGGTAACTCGTCTTACTCTCCCCTTAACTCTAATTCCAACTTCAGTGATCGTCCACCCACTGAGATGGCGCCTCTTTTCCCTGGATGTGACTATGAGCACTGGCTC
ATTGTCATGGACAAGCCTGGTGGTGAGGGTGCCACTAAGCAGCAGATGATCGATTGCTACATTCAGACCCTCGCTAAAGTTGTTGGCAGTGAAGAGGAAGCGAAGAAGAA
GATTTATAATGTGTCTTGTGAGAGGTATTTTGGGTTTGGGTGTGAGCTTGATGAAGAGACCTCCAACAAGCTCGAAGGCTTGCCAGGCGTTCTGTTTGTTCTTCCTGATT
CTTATGTCGACCCTGAGTATAAAGACTATGGGGCTGAGTTGTTCGTGAATGGAGAGATTGTTCAAAGGTCACCAGAAAGACAGAGAAGGGTGGATCCACAGCCTCAGAGA
GTTCAAGATAGACCGAAGTATAGCGACAGGACCCGCTATGTGAGACGCAGAGAAAACATGAGCCCAAACAGCATTATCCAGCCCAACAACAAAAGAAGCTTATCCCCTTC
TCCTTCAGAAACTCAACCAGACGTTTCTCCAACTTACAAAGATAACCATCACTCCACACATAAACTCTCCTCACTAACAATGGCGGCTTCCGTCGTCTTAGGCTTCACGC
CGGCCACTTCTTCCGGTGTAATGGCACTCTCCTCAACTAAACTTCACTTCAGAACTAAAGCGAATTCCCAGCTAGGGTTTCTTACTTCTCAATTGGCTGGCATCAAAATC
TCCTCCAACCACTCGCTGATCTCCCCCTCTCCCATTTCTACTGCTCCTCTCAGACCTCCCCTTCAACCTGTTGCTCGTAGAGTTTGTCCCTTTACTGGAAAGAAAGCAAA
TAAGAAGAACTTAGTTTCTTTCTCCAACCACAAGACCAAGAAGTTGCAGTTTGTAAATCTTCAATACAAGAAGGTTTGGTGGGAAGCTGGGAAGCGTTTTGTCAAACTAC
GCTTGTCAACTAAGGCTTTGAAGACCATTGAGAAGAATGGACTTGATGCTGTGGCTAAGAAGGCTGGAATTGATCTTCGTAAGGAATGA
mRNA sequenceShow/hide mRNA sequence
ACATTGTGGTGCCCAAAAACAATATATAAACTTAATAATGGGCCGTAAAGAGGCAGAAAGGGCAGGCCCAGTAAAAAGAAGAAACGCAACTCTTACACAGAGCCTTCTTC
TATTAAAACCCTCGAAGCCTTGTTCTTCTTCCACATATCTACTTTTCATCACTATAAACCCTTTCTCTCTCGCCTGCCTGCTATGGCGTTATCCCTTCTTCGAGCTATGG
CTTCCGCCTCCACCTCCACTGCCCGCCTCTCTCTTCTTCACAGACGCCTCTTCTCCTCCTCAACTACTCTTACACATCCTCCTTCACCCCCTTCTCTCACTCTCTGCCGT
CGATCTCTCCCTCCCCTTTCCCATGCCGTTCGATCTATCCCTTCCGCCTCCAGGTTCACCTCTATTCGTTGCCGCGTCAATCGCTCAGGTAACTCGTCTTACTCTCCCCT
TAACTCTAATTCCAACTTCAGTGATCGTCCACCCACTGAGATGGCGCCTCTTTTCCCTGGATGTGACTATGAGCACTGGCTCATTGTCATGGACAAGCCTGGTGGTGAGG
GTGCCACTAAGCAGCAGATGATCGATTGCTACATTCAGACCCTCGCTAAAGTTGTTGGCAGTGAAGAGGAAGCGAAGAAGAAGATTTATAATGTGTCTTGTGAGAGGTAT
TTTGGGTTTGGGTGTGAGCTTGATGAAGAGACCTCCAACAAGCTCGAAGGCTTGCCAGGCGTTCTGTTTGTTCTTCCTGATTCTTATGTCGACCCTGAGTATAAAGACTA
TGGGGCTGAGTTGTTCGTGAATGGAGAGATTGTTCAAAGGTCACCAGAAAGACAGAGAAGGGTGGATCCACAGCCTCAGAGAGTTCAAGATAGACCGAAGTATAGCGACA
GGACCCGCTATGTGAGACGCAGAGAAAACATGAGCCCAAACAGCATTATCCAGCCCAACAACAAAAGAAGCTTATCCCCTTCTCCTTCAGAAACTCAACCAGACGTTTCT
CCAACTTACAAAGATAACCATCACTCCACACATAAACTCTCCTCACTAACAATGGCGGCTTCCGTCGTCTTAGGCTTCACGCCGGCCACTTCTTCCGGTGTAATGGCACT
CTCCTCAACTAAACTTCACTTCAGAACTAAAGCGAATTCCCAGCTAGGGTTTCTTACTTCTCAATTGGCTGGCATCAAAATCTCCTCCAACCACTCGCTGATCTCCCCCT
CTCCCATTTCTACTGCTCCTCTCAGACCTCCCCTTCAACCTGTTGCTCGTAGAGTTTGTCCCTTTACTGGAAAGAAAGCAAATAAGAAGAACTTAGTTTCTTTCTCCAAC
CACAAGACCAAGAAGTTGCAGTTTGTAAATCTTCAATACAAGAAGGTTTGGTGGGAAGCTGGGAAGCGTTTTGTCAAACTACGCTTGTCAACTAAGGCTTTGAAGACCAT
TGAGAAGAATGGACTTGATGCTGTGGCTAAGAAGGCTGGAATTGATCTTCGTAAGGAATGATTTGAAAATGCAGCAAGCAAGAAAATCTTGAGTAAAACCTTAGGTTGGG
ATGGCAAATTCCCACTTCTCTATATATAAAGAACGCAAGCGTTCATCATCTGAAAGGTTCAACTGGTGCTGACTCTTCAAGCAGGGTTGCAGCTTCAAAGCATTCAGCAA
TCTCCAGTGCCGATGCCCCAATGTCAGCTTTATATAGCATCCCGAGACTGTACCACGCAGATGGATTTGCTCGATCTAGTCGAAGGGCATCAGTTAGCAAGCTTCTTACC
ACAGGAAACGACTGGTTGCCGCCTAACTGTTGGAGAAGACAGGCAGTGGATATCAAGCTGGGAACATGGCCAGGATCAATGTCCAATGCTTTGTTGTATGCTTGCAAAGC
ATCTCGTGGAAGACCCTTCGACTCATAGAGTAAACCTAGCAGATTCATCAAGTTATGAATTCATTATTGAATAGTATAGATATCACGGGTCGATGACGTTTTTATCAACA
CACTTCATCAATGGGGAAATTTTGACCAAATCTAAGTTGACTACTAGTAATGAGTCTTCCTTTTCTTTATAATTTTTTTGGGGTTTTGAAAGCAACAAGCTAACATGAAA
CCACAGGCCTCTAAAAGTTAAAAATGGCCACATAAGAGAATCACAACTAAACTAAATGCTTTCTGAAGAAGTAATTCATAAATGGGGATGATGTTTTTACCTGTGGAATG
CCATTTGGAAGCAGAATACGGATTGATTGCCTCCAATTTTGAGAGACAGATCTCAGCATCCCGCCACTGAGACAAGCTTGTGTAAGTATTGGCTAAGTCATGCCATGTAT
CTACTTCCAGACTTCTGTCAGATTTTCTCACATACTGTATGAAGATGAAACAAAAGAATAAATGAACTAATTATTAACTCAA
Protein sequenceShow/hide protein sequence
MALSLLRAMASASTSTARLSLLHRRLFSSSTTLTHPPSPPSLTLCRRSLPPLSHAVRSIPSASRFTSIRCRVNRSGNSSYSPLNSNSNFSDRPPTEMAPLFPGCDYEHWL
IVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPEYKDYGAELFVNGEIVQRSPERQRRVDPQPQR
VQDRPKYSDRTRYVRRRENMSPNSIIQPNNKRSLSPSPSETQPDVSPTYKDNHHSTHKLSSLTMAASVVLGFTPATSSGVMALSSTKLHFRTKANSQLGFLTSQLAGIKI
SSNHSLISPSPISTAPLRPPLQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQFVNLQYKKVWWEAGKRFVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE