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Lsi05G017550 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G017550
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:24936130..24940005
RNA-Seq ExpressionLsi05G017550
SyntenyLsi05G017550
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACR35733.1 unknown [Zea mays]5.4e-0432.5Show/hide
Query:  MRKRLPPIPSSSYNDLSHPDERASIGELVPVKGCTSSKYENGYSKAYSGNAISQPPPHILLYVNKSGGGKESAKEDAEHPPVEEGQLLGLLLGMEVVELV
        +R+    +P SS + L    +RA    LVPV   T  +           +     PP+++L+ +    G++ A  D E  PVEEG L   L G+  VELV
Subjt:  MRKRLPPIPSSSYNDLSHPDERASIGELVPVKGCTSSKYENGYSKAYSGNAISQPPPHILLYVNKSGGGKESAKEDAEHPPVEEGQLLGLLLGMEVVELV

Query:  GSDCRDVWFGSARTESQFVE
        G++  D    SA  ES  VE
Subjt:  GSDCRDVWFGSARTESQFVE

BAS93455.1 Os05g0336000, partial [Oryza sativa Japonica Group]1.5e-0935.37Show/hide
Query:  VLLKLKLMELPRVMRKRLPPIPSSSYNDLSHPDERASIG------ELVPVKGCTSSKYENGYSKAYSGNAISQPPPHILLYVNKSGGGKESAKEDAEHPP
        VL++L  ++LP  +R+R P  P         PDE    G       LV V+     + +    +A  G+ ++  P  +LL V++   G E+A E AEHPP
Subjt:  VLLKLKLMELPRVMRKRLPPIPSSSYNDLSHPDERASIG------ELVPVKGCTSSKYENGYSKAYSGNAISQPPPHILLYVNKSGGGKESAKEDAEHPP

Query:  VEEGQLLGLLLGMEVVELVGSDCRDVWFGSARTESQFVECSEEDSKL
        VEEG L   L G+EVVELVG++  DV  G+A  +   V+   E+  L
Subjt:  VEEGQLLGLLLGMEVVELVGSDCRDVWFGSARTESQFVECSEEDSKL

KAB8098973.1 hypothetical protein EE612_028737, partial [Oryza sativa]1.9e-0935.37Show/hide
Query:  VLLKLKLMELPRVMRKRLPPIPSSSYNDLSHPDERASIG------ELVPVKGCTSSKYENGYSKAYSGNAISQPPPHILLYVNKSGGGKESAKEDAEHPP
        VL++L  ++LP  +R+R P  P         PDE    G       LV V+     + +    +A  G+ ++  P  +LL V++   G E+A E AEHPP
Subjt:  VLLKLKLMELPRVMRKRLPPIPSSSYNDLSHPDERASIG------ELVPVKGCTSSKYENGYSKAYSGNAISQPPPHILLYVNKSGGGKESAKEDAEHPP

Query:  VEEGQLLGLLLGMEVVELVGSDCRDVWFGSARTESQFVECSEEDSKL
        VEEG L   L G+EVVELVG++  DV  G+A  +   V+   E+  L
Subjt:  VEEGQLLGLLLGMEVVELVGSDCRDVWFGSARTESQFVECSEEDSKL

RDX80311.1 hypothetical protein CR513_39156, partial [Mucuna pruriens]7.7e-1136Show/hide
Query:  RLPPIPSSSYNDLSHPDERASIGELVPVKGCTSSKYENGYSKAYSGNAISQPPPHILLYVNKSGGGKESAKEDAEHPPVEEGQLLGLLLGMEVVELVGSD
        RL P+ S+SY     P+         P+      +Y N  SK   G AIS  P H +LYVN+   G++  KE+A+ PP+EEG+L+G   G+++++LV S 
Subjt:  RLPPIPSSSYNDLSHPDERASIGELVPVKGCTSSKYENGYSKAYSGNAISQPPPHILLYVNKSGGGKESAKEDAEHPPVEEGQLLGLLLGMEVVELVGSD

Query:  CRDVWFGSARTESQFVECSEEDSKL
         R+V  GS       ++ SEE++ L
Subjt:  CRDVWFGSARTESQFVECSEEDSKL

TrEMBL top hitse value%identityAlignment
A0A0A9HNK4 Uncharacterized protein3.4e-0429.2Show/hide
Query:  LLKLKLMELPRVMRKRLPPIPSSSYNDLSHPDERASIGELVPVKGCTSSKYENGYSKAYSGNAISQPPPHILLYVNKSGGGKESAKEDAEHPPVEEGQLL
        +L+L L++L  V R+   P+P    +DL    +RA++   VPV+     + + G +     +     P   LL V+  G  ++ A  +   PPVEEG LL
Subjt:  LLKLKLMELPRVMRKRLPPIPSSSYNDLSHPDERASIGELVPVKGCTSSKYENGYSKAYSGNAISQPPPHILLYVNKSGGGKESAKEDAEHPPVEEGQLL

Query:  GLLLGMEVVELVGSDCRDVWFGSARTESQFVECSEED
          L  + +VELVG++        A  +   V+  EE+
Subjt:  GLLLGMEVVELVGSDCRDVWFGSARTESQFVECSEED

A0A0P0WKW6 Os05g0336000 protein (Fragment)7.1e-1035.37Show/hide
Query:  VLLKLKLMELPRVMRKRLPPIPSSSYNDLSHPDERASIG------ELVPVKGCTSSKYENGYSKAYSGNAISQPPPHILLYVNKSGGGKESAKEDAEHPP
        VL++L  ++LP  +R+R P  P         PDE    G       LV V+     + +    +A  G+ ++  P  +LL V++   G E+A E AEHPP
Subjt:  VLLKLKLMELPRVMRKRLPPIPSSSYNDLSHPDERASIG------ELVPVKGCTSSKYENGYSKAYSGNAISQPPPHILLYVNKSGGGKESAKEDAEHPP

Query:  VEEGQLLGLLLGMEVVELVGSDCRDVWFGSARTESQFVECSEEDSKL
        VEEG L   L G+EVVELVG++  DV  G+A  +   V+   E+  L
Subjt:  VEEGQLLGLLLGMEVVELVGSDCRDVWFGSARTESQFVECSEEDSKL

A0A371FPX3 Uncharacterized protein (Fragment)3.8e-1136Show/hide
Query:  RLPPIPSSSYNDLSHPDERASIGELVPVKGCTSSKYENGYSKAYSGNAISQPPPHILLYVNKSGGGKESAKEDAEHPPVEEGQLLGLLLGMEVVELVGSD
        RL P+ S+SY     P+         P+      +Y N  SK   G AIS  P H +LYVN+   G++  KE+A+ PP+EEG+L+G   G+++++LV S 
Subjt:  RLPPIPSSSYNDLSHPDERASIGELVPVKGCTSSKYENGYSKAYSGNAISQPPPHILLYVNKSGGGKESAKEDAEHPPVEEGQLLGLLLGMEVVELVGSD

Query:  CRDVWFGSARTESQFVECSEEDSKL
         R+V  GS       ++ SEE++ L
Subjt:  CRDVWFGSARTESQFVECSEEDSKL

C0P3X1 Uncharacterized protein7.6e-0433.91Show/hide
Query:  LKLMELPRVMRKRLPPIPSSSYNDLSHPDERASIGELV-PVKGCTSSKYENGYSKAYSGNAISQPPPHILLYVNKSGGGKESAKEDAEHPPVEEGQLLGL
        L L++  RV R     +P+   +DL  P ERA+   LV  V+G    +  +G       +A+ +PP    L+ ++ G   + A  D E  PVEEG L   
Subjt:  LKLMELPRVMRKRLPPIPSSSYNDLSHPDERASIGELV-PVKGCTSSKYENGYSKAYSGNAISQPPPHILLYVNKSGGGKESAKEDAEHPPVEEGQLLGL

Query:  LLGMEVVELVGSDCR
        LL   +VELVG++ R
Subjt:  LLGMEVVELVGSDCR

C4J3I3 Uncharacterized protein2.6e-0432.5Show/hide
Query:  MRKRLPPIPSSSYNDLSHPDERASIGELVPVKGCTSSKYENGYSKAYSGNAISQPPPHILLYVNKSGGGKESAKEDAEHPPVEEGQLLGLLLGMEVVELV
        +R+    +P SS + L    +RA    LVPV   T  +           +     PP+++L+ +    G++ A  D E  PVEEG L   L G+  VELV
Subjt:  MRKRLPPIPSSSYNDLSHPDERASIGELVPVKGCTSSKYENGYSKAYSGNAISQPPPHILLYVNKSGGGKESAKEDAEHPPVEEGQLLGLLLGMEVVELV

Query:  GSDCRDVWFGSARTESQFVE
        G++  D    SA  ES  VE
Subjt:  GSDCRDVWFGSARTESQFVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAACATACTTCTGCTTTGTACACATACATATTGGACATGAGCAAGAAGAGGAAGAAGTTGATGGCACAAAGCACTGCCAAAAACGCATAGTAGTAGTCAAGATGAG
AAGCATTCAGATTGTTCACAATCCATCCATTGCTATGAGGGATTTGAAAGTGGCTACCGATGCTTCGGTTGAGAGTCCTGCCTTGCTTGATGAAAAGGGATGGAGTGGAA
TCAATCCTGAAAGTTCCTTGCTTAGTGTACTCCTCAAGCTGAAGCTCATGGAGTTGCCTAGGGTCATGAGGAAGAGGCTGCCTCCAATTCCAAGCAGTAGCTACAATGAC
CTTAGCCATCCTGATGAAAGGGCTTCCATTGGGGAGCTTGTGCCTGTAAAAGGGTGTACCAGCAGCAAATATGAGAATGGCTATTCCAAGGCCTACAGTGGGAATGCCAT
ATCCCAACCCCCACCCCACATTCTCTTGTATGTAAACAAGAGTGGTGGTGGCAAAGAGAGTGCCAAAGAAGATGCTGAACATCCACCAGTTGAAGAAGGACAACTTCTGG
GCCTTCTCCTCGGGATGGAAGTCGTCGAACTGGTCGGCTCCGATTGTCGAGATGTTTGGTTTGGTTCCGCCCGTACCGAGAGCCAATTTGTAGAGTGCAGTGAAGAAGAC
AGCAAGCTATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTAACATACTTCTGCTTTGTACACATACATATTGGACATGAGCAAGAAGAGGAAGAAGTTGATGGCACAAAGCACTGCCAAAAACGCATAGTAGTAGTCAAGATGAG
AAGCATTCAGATTGTTCACAATCCATCCATTGCTATGAGGGATTTGAAAGTGGCTACCGATGCTTCGGTTGAGAGTCCTGCCTTGCTTGATGAAAAGGGATGGAGTGGAA
TCAATCCTGAAAGTTCCTTGCTTAGTGTACTCCTCAAGCTGAAGCTCATGGAGTTGCCTAGGGTCATGAGGAAGAGGCTGCCTCCAATTCCAAGCAGTAGCTACAATGAC
CTTAGCCATCCTGATGAAAGGGCTTCCATTGGGGAGCTTGTGCCTGTAAAAGGGTGTACCAGCAGCAAATATGAGAATGGCTATTCCAAGGCCTACAGTGGGAATGCCAT
ATCCCAACCCCCACCCCACATTCTCTTGTATGTAAACAAGAGTGGTGGTGGCAAAGAGAGTGCCAAAGAAGATGCTGAACATCCACCAGTTGAAGAAGGACAACTTCTGG
GCCTTCTCCTCGGGATGGAAGTCGTCGAACTGGTCGGCTCCGATTGTCGAGATGTTTGGTTTGGTTCCGCCCGTACCGAGAGCCAATTTGTAGAGTGCAGTGAAGAAGAC
AGCAAGCTATAG
Protein sequenceShow/hide protein sequence
MLTYFCFVHIHIGHEQEEEEVDGTKHCQKRIVVVKMRSIQIVHNPSIAMRDLKVATDASVESPALLDEKGWSGINPESSLLSVLLKLKLMELPRVMRKRLPPIPSSSYND
LSHPDERASIGELVPVKGCTSSKYENGYSKAYSGNAISQPPPHILLYVNKSGGGKESAKEDAEHPPVEEGQLLGLLLGMEVVELVGSDCRDVWFGSARTESQFVECSEED
SKL