; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G017850 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G017850
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLate embryogenesis abundant protein family protein
Genome locationchr05:25171661..25172489
RNA-Seq ExpressionLsi05G017850
SyntenyLsi05G017850
Gene Ontology termsNA
InterPro domainsIPR039624 - Stress-induced protein KIN1/KIN2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3486235.1 hypothetical protein F2Q69_00053541 [Brassica cretica]2.1e-1862.22Show/hide
Query:  MSSMQQSFKAGQSQGQAEAKTEEWIESGKEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK
        MS++QQS+ AGQ++GQA  K E+W ES KE A+ ACDK +NAAQS KESA   +Q+ S F+QQTGE + NMA GAVD VKNTLGMN  +K
Subjt:  MSSMQQSFKAGQSQGQAEAKTEEWIESGKEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK

XP_009102532.1 late embryogenesis abundant protein 1 [Brassica rapa]3.2e-1963.33Show/hide
Query:  MSSMQQSFKAGQSQGQAEAKTEEWIESGKEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK
        MS++QQS+ AGQ++GQA  K E+W ES KE A+ ACDK +NAAQS KESA   +Q+ S F+QQTGE + NMAQGAVD VKNTLGMN  +K
Subjt:  MSSMQQSFKAGQSQGQAEAKTEEWIESGKEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK

XP_013597327.1 PREDICTED: late embryogenesis abundant protein 1-like [Brassica oleracea var. oleracea]9.3e-1962.22Show/hide
Query:  MSSMQQSFKAGQSQGQAEAKTEEWIESGKEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK
        MS++QQS+ AGQ++GQA  K E+W +S KE A+ ACDK +NAAQS KESA   +Q+ S F+QQTGE + NMAQGAVD VKNTLGMN  +K
Subjt:  MSSMQQSFKAGQSQGQAEAKTEEWIESGKEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK

XP_018432834.1 PREDICTED: late embryogenesis abundant protein 1-like [Raphanus sativus]2.4e-1963.33Show/hide
Query:  MSSMQQSFKAGQSQGQAEAKTEEWIESGKEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK
        MS++QQS+ AGQ++GQA+ K E+W ES KE A+ ACDK +NAAQS KESA   +Q+ S F+QQTGE + NMAQGAVD VKNTLGMN  +K
Subjt:  MSSMQQSFKAGQSQGQAEAKTEEWIESGKEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK

XP_022157950.1 late embryogenesis abundant protein 1 [Momordica charantia]1.5e-2173.56Show/hide
Query:  MSSMQQSFKAGQSQGQAEAKTEEWIESGKEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNN
        MSSMQQS KAGQS G+ +AKTE+ IESGKE AN A DKA++A QSAKESA+E   ETS FLQQTGEQM++MAQGAVDT+K+TLGMN+
Subjt:  MSSMQQSFKAGQSQGQAEAKTEEWIESGKEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNN

TrEMBL top hitse value%identityAlignment
A0A397YQV0 Uncharacterized protein1.5e-1963.33Show/hide
Query:  MSSMQQSFKAGQSQGQAEAKTEEWIESGKEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK
        MS++QQS+ AGQ++GQA  K E+W ES KE A+ ACDK +NAAQS KESA   +Q+ S F+QQTGE + NMAQGAVD VKNTLGMN  +K
Subjt:  MSSMQQSFKAGQSQGQAEAKTEEWIESGKEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK

A0A3P6ERB9 Uncharacterized protein1.5e-1963.33Show/hide
Query:  MSSMQQSFKAGQSQGQAEAKTEEWIESGKEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK
        MS++QQS+ AGQ++GQA  K E+W ES KE A+ ACDK +NAAQS KESA   +Q+ S F+QQTGE + NMAQGAVD VKNTLGMN  +K
Subjt:  MSSMQQSFKAGQSQGQAEAKTEEWIESGKEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK

A0A6J0JD89 late embryogenesis abundant protein 1-like1.2e-1963.33Show/hide
Query:  MSSMQQSFKAGQSQGQAEAKTEEWIESGKEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK
        MS++QQS+ AGQ++GQA+ K E+W ES KE A+ ACDK +NAAQS KESA   +Q+ S F+QQTGE + NMAQGAVD VKNTLGMN  +K
Subjt:  MSSMQQSFKAGQSQGQAEAKTEEWIESGKEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK

A0A6J1DUG1 late embryogenesis abundant protein 17.4e-2273.56Show/hide
Query:  MSSMQQSFKAGQSQGQAEAKTEEWIESGKEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNN
        MSSMQQS KAGQS G+ +AKTE+ IESGKE AN A DKA++A QSAKESA+E   ETS FLQQTGEQM++MAQGAVDT+K+TLGMN+
Subjt:  MSSMQQSFKAGQSQGQAEAKTEEWIESGKEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNN

M4DEV0 Uncharacterized protein1.5e-1963.33Show/hide
Query:  MSSMQQSFKAGQSQGQAEAKTEEWIESGKEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK
        MS++QQS+ AGQ++GQA  K E+W ES KE A+ ACDK +NAAQS KESA   +Q+ S F+QQTGE + NMAQGAVD VKNTLGMN  +K
Subjt:  MSSMQQSFKAGQSQGQAEAKTEEWIESGKEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK

SwissProt top hitse value%identityAlignment
O49816 Late embryogenesis abundant protein 11.4e-0642.11Show/hide
Query:  QQSFKAGQSQGQ-----AEAKTEEWIESGKEAA----NKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK
        QQ+ +A + + Q     A+ KT++  E+ KE A     +A +K S   QS KE+A   K  ++ FLQQTGE++  MAQGA D VK T GM N +K
Subjt:  QQSFKAGQSQGQ-----AEAKTEEWIESGKEAA----NKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK

O49817 Late embryogenesis abundant protein 24.2e-0641.86Show/hide
Query:  KAGQSQGQAEAKTEEWIESGKEAA----NKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK
        K  Q+   A+ KT++  ++ KE A     +A +K S   QS KE+A   K  ++ FLQQTGE+   MAQGA D VK T GM N ++
Subjt:  KAGQSQGQAEAKTEEWIESGKEAA----NKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK

P13934 Late embryogenesis abundant protein 761.0e-0444.62Show/hide
Query:  ESGKEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK
        +  ++AA    + A NAAQ  KE+A   K +T  FL QTGE +  MA GA D VK+T GM   E+
Subjt:  ESGKEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK

P13939 Late embryogenesis abundant protein D-72.7e-0532.52Show/hide
Query:  MSSMQQSFKAGQSQGQAEAKTEEWIESGKEAANKACDKASNAAQSAKE---------------------------------SAHEIKQETSNFLQQTGEQ
        M+S +QS+KAG+++G+A  K E+  ES KE A  A  K    A++AK+                                  A E K+ +   LQQ GE+
Subjt:  MSSMQQSFKAGQSQGQAEAKTEEWIESGKEAANKACDKASNAAQSAKE---------------------------------SAHEIKQETSNFLQQTGEQ

Query:  MMNMAQGAVDTVKNTLGMNNSEK
        + N AQGA D VK+T GM ++++
Subjt:  MMNMAQGAVDTVKNTLGMNNSEK

P14928 ABA-inducible protein PHV A18.8e-0444.3Show/hide
Query:  GQSQGQAEAKTEEWIESGK----EAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGM
        G+    A+ K  E  E+ K    EA   A  KAS+ AQ  KESA   K +T + LQQ GE ++N   GA D V NTLGM
Subjt:  GQSQGQAEAKTEEWIESGK----EAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGM

Arabidopsis top hitse value%identityAlignment
AT1G52680.1 late embryogenesis abundant protein-related / LEA protein-related2.3e-0742.22Show/hide
Query:  SSMQQSFKAGQSQGQAEAKTEEWIESGKEAANKACDKASNAAQSAKESAHE-----IKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMN
        SS Q S  AG+  GQ + K EE++ +   A N+  D  ++ +QS   S H+     +  + S+ +QQTG Q+ NMAQGA D VKNTLGM+
Subjt:  SSMQQSFKAGQSQGQAEAKTEEWIESGKEAANKACDKASNAAQSAKESAHE-----IKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMN

AT1G52690.1 Late embryogenesis abundant protein (LEA) family protein1.4e-0437Show/hide
Query:  SSMQQSFKAGQS----QGQAEAKTEEWIESGK--------EAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSE
        S+ Q++ +  QS      QA   T+E  +  K        E      +KA +AA+  KE+A   K++TS  L QTGEQ+  MA GA D VK+TLG+   E
Subjt:  SSMQQSFKAGQS----QGQAEAKTEEWIESGK--------EAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSE

AT1G52690.2 Late embryogenesis abundant protein (LEA) family protein1.4e-0437Show/hide
Query:  SSMQQSFKAGQS----QGQAEAKTEEWIESGK--------EAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSE
        S+ Q++ +  QS      QA   T+E  +  K        E      +KA +AA+  KE+A   K++TS  L QTGEQ+  MA GA D VK+TLG+   E
Subjt:  SSMQQSFKAGQS----QGQAEAKTEEWIESGK--------EAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSE

AT3G15670.1 Late embryogenesis abundant protein (LEA) family protein1.1e-0436.08Show/hide
Query:  SSMQQSFKAGQSQGQAEAKTEEWI-ESGKEAANKACD-------KASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK
        ++ +++ +AG    +A+ K   ++ E+G+   NKA D        A  AAQ  KE+A   + +T  FL QTGE +  MA GA D VK+T GM   E+
Subjt:  SSMQQSFKAGQSQGQAEAKTEEWI-ESGKEAANKACD-------KASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK

AT4G13560.1 Late embryogenesis abundant protein (LEA) family protein8.1e-1342.2Show/hide
Query:  QQSFKAGQSQGQAEAKTEEWIESGKEAANKACDKASNAAQSAKESAHEIKQ----------------------ETSNFLQQTGEQMMNMAQGAVDTVKNT
        QQ F AGQ++GQA+ K E+W ES K+ A  ACDK ++  QSA++ A ++ Q                      + +    QTGE + NMAQGA+D VKN+
Subjt:  QQSFKAGQSQGQAEAKTEEWIESGKEAANKACDKASNAAQSAKESAHEIKQ----------------------ETSNFLQQTGEQMMNMAQGAVDTVKNT

Query:  LGMNNSEKK
        LGMN  EKK
Subjt:  LGMNNSEKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAGCATGCAACAATCCTTCAAGGCAGGCCAATCCCAAGGCCAAGCAGAGGCAAAGACTGAAGAATGGATTGAATCGGGAAAGGAAGCAGCAAACAAGGCATGTGA
CAAGGCATCCAATGCTGCGCAATCTGCTAAGGAGTCTGCCCACGAAATCAAGCAAGAAACTTCCAATTTTCTCCAACAGACTGGAGAGCAAATGATGAATATGGCTCAAG
GTGCAGTGGATACCGTTAAGAATACACTCGGAATGAATAACAGTGAAAAGAAGAATTGA
mRNA sequenceShow/hide mRNA sequence
AAGCAAGGAATCGTCATCATTTCTATTTCTACAAACAAAATCCAAAAAAGAAAAAAAAAAAAAAAATACAAATCAATTATTTTATTTAAAAAAAAAACCATGTCAAGCAT
GCAACAATCCTTCAAGGCAGGCCAATCCCAAGGCCAAGCAGAGGCAAAGACTGAAGAATGGATTGAATCGGGAAAGGAAGCAGCAAACAAGGCATGTGACAAGGCATCCA
ATGCTGCGCAATCTGCTAAGGAGTCTGCCCACGAAATCAAGCAAGAAACTTCCAATTTTCTCCAACAGACTGGAGAGCAAATGATGAATATGGCTCAAGGTGCAGTGGAT
ACCGTTAAGAATACACTCGGAATGAATAACAGTGAAAAGAAGAATTGAATGTTATTAGTTTATTTTTTTTATAAACAAAATAATTATTTGATGTGTTGTCAACAAAATAA
TTATTTGATGTGTTGTCTTTTTTTCTCTTATTAACTTAAGGTTGTAAGCGTAAGATGAGTTGTGGAAATATTTCTTTCACGGGAGAAATTCTCAACCTCTTGTAATAAAA
AATTACTTTAGTTTTATCTTATAACTCTCTCTTTTATTTATTAATTATTTATTGTTATTTTGAAAAGCC
Protein sequenceShow/hide protein sequence
MSSMQQSFKAGQSQGQAEAKTEEWIESGKEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEKKN