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Lsi05G017970 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G017970
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:25267372..25269660
RNA-Seq ExpressionLsi05G017970
SyntenyLsi05G017970
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN56783.1 hypothetical protein Csa_011618 [Cucumis sativus]2.5e-1054.67Show/hide
Query:  DRCVKIGYLMSPHNEHPKMSRHLHFYPQPCHSGSGSSSNQCAHFNSHESTLSGRNLINLPSMGKGRRGPKNLDLL
        D  VKIGYL SPHNE  K+SRHL FYPQPC SGSGS                 +NLI+LP +GKG +G  +LDLL
Subjt:  DRCVKIGYLMSPHNEHPKMSRHLHFYPQPCHSGSGSSSNQCAHFNSHESTLSGRNLINLPSMGKGRRGPKNLDLL
TrEMBL top hitse value%identityAlignment
A0A0A0L4U2 Uncharacterized protein1.2e-1054.67Show/hide
Query:  DRCVKIGYLMSPHNEHPKMSRHLHFYPQPCHSGSGSSSNQCAHFNSHESTLSGRNLINLPSMGKGRRGPKNLDLL
        D  VKIGYL SPHNE  K+SRHL FYPQPC SGSGS                 +NLI+LP +GKG +G  +LDLL
Subjt:  DRCVKIGYLMSPHNEHPKMSRHLHFYPQPCHSGSGSSSNQCAHFNSHESTLSGRNLINLPSMGKGRRGPKNLDLL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAGATGTGTAAAAATTGGATACCTCATGTCCCCTCATAACGAACATCCAAAGATGTCAAGGCATCTCCATTTTTATCCCCAACCATGCCATTCCGGTTCTGGTTC
CAGTTCCAATCAGTGTGCCCACTTCAATTCTCATGAGTCAACCCTTTCTGGCAGAAACTTGATCAACCTGCCTAGCATGGGGAAGGGGAGAAGGGGCCCTAAAAATTTGG
ATCTACTATTTTACAAATTCAAAACTTTCGTGGCCACTAGAAACAGCATTAAAGCAAAAACGACCGACACAGCCAAAATGAAACCATTCGATCTTGCACTGACCATAGAG
GATCATAAGAATACAGGATATCAAAGATGGAAACAAATGATTACCTTGACGAAGCTTTTCATCAAAATTCTTCAAATACTGGTCAAGCTGTTGTATGTGGGTATCTACCT
GAAGCACAATACAAATGAACAGAATAGTTGGACATACCAAATCATATGCCTGAACAGCAAGGGCAACCTTTTCATCGGCAATTCTGATGCTATGCTTCTGTTCATCAAGA
GCTTCATCAGAGAATCTAATGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACAGATGTGTAAAAATTGGATACCTCATGTCCCCTCATAACGAACATCCAAAGATGTCAAGGCATCTCCATTTTTATCCCCAACCATGCCATTCCGGTTCTGGTTC
CAGTTCCAATCAGTGTGCCCACTTCAATTCTCATGAGTCAACCCTTTCTGGCAGAAACTTGATCAACCTGCCTAGCATGGGGAAGGGGAGAAGGGGCCCTAAAAATTTGG
ATCTACTATTTTACAAATTCAAAACTTTCGTGGCCACTAGAAACAGCATTAAAGCAAAAACGACCGACACAGCCAAAATGAAACCATTCGATCTTGCACTGACCATAGAG
GATCATAAGAATACAGGATATCAAAGATGGAAACAAATGATTACCTTGACGAAGCTTTTCATCAAAATTCTTCAAATACTGGTCAAGCTGTTGTATGTGGGTATCTACCT
GAAGCACAATACAAATGAACAGAATAGTTGGACATACCAAATCATATGCCTGAACAGCAAGGGCAACCTTTTCATCGGCAATTCTGATGCTATGCTTCTGTTCATCAAGA
GCTTCATCAGAGAATCTAATGAGTGA
Protein sequenceShow/hide protein sequence
MDRCVKIGYLMSPHNEHPKMSRHLHFYPQPCHSGSGSSSNQCAHFNSHESTLSGRNLINLPSMGKGRRGPKNLDLLFYKFKTFVATRNSIKAKTTDTAKMKPFDLALTIE
DHKNTGYQRWKQMITLTKLFIKILQILVKLLYVGIYLKHNTNEQNSWTYQIICLNSKGNLFIGNSDAMLLFIKSFIRESNE