; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G018080 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G018080
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:25338050..25338256
RNA-Seq ExpressionLsi05G018080
SyntenyLsi05G018080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582444.1 hypothetical protein SDJN03_22446, partial [Cucurbita argyrosperma subsp. sororia]4.9e-0970.67Show/hide
Query:  MARPGIFLCFLALIITSSFALQQPN--AGGGTKTIT--------GRGGGGGGGGGSSSGPGTGSGEGHGSGRGGG
        MARPG+FLCFL LI++SSFA QQPN  AGG  +TI         G GGGGGGGGGSSSGPGTGSG G GSGRGGG
Subjt:  MARPGIFLCFLALIITSSFALQQPN--AGGGTKTIT--------GRGGGGGGGGGSSSGPGTGSGEGHGSGRGGG
KGN56771.1 hypothetical protein Csa_010322 [Cucumis sativus]4.2e-0878.38Show/hide
Query:  MARPGIFLCFLALIITSSFALQQP-NAG-GGTKTIT---GRGGGGGGGGGSSSGPGTGSGEGHGSGR-GGGSGR
        MARPGIFLC LALII SSFA QQP N G G TKTIT   G GGGGGGGGGSSSGP TGSG G GSG  GGGSGR
Subjt:  MARPGIFLCFLALIITSSFALQQP-NAG-GGTKTIT---GRGGGGGGGGGSSSGPGTGSGEGHGSGR-GGGSGR
TrEMBL top hitse value%identityAlignment
A0A0A0L9I6 Uncharacterized protein2.0e-0878.38Show/hide
Query:  MARPGIFLCFLALIITSSFALQQP-NAG-GGTKTIT---GRGGGGGGGGGSSSGPGTGSGEGHGSGR-GGGSGR
        MARPGIFLC LALII SSFA QQP N G G TKTIT   G GGGGGGGGGSSSGP TGSG G GSG  GGGSGR
Subjt:  MARPGIFLCFLALIITSSFALQQP-NAG-GGTKTIT---GRGGGGGGGGGSSSGPGTGSGEGHGSGR-GGGSGR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGACCCGGAATTTTCCTCTGTTTTTTGGCTTTGATCATAACCAGTAGCTTTGCTCTGCAGCAGCCCAACGCCGGCGGCGGCACGAAAACTATTACCGGACGAGG
CGGCGGTGGCGGTGGCGGAGGTGGATCGAGTAGTGGTCCGGGTACGGGCTCTGGTGAAGGGCATGGGTCGGGAAGAGGTGGTGGGTCGGGTCGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTCGACCCGGAATTTTCCTCTGTTTTTTGGCTTTGATCATAACCAGTAGCTTTGCTCTGCAGCAGCCCAACGCCGGCGGCGGCACGAAAACTATTACCGGACGAGG
CGGCGGTGGCGGTGGCGGAGGTGGATCGAGTAGTGGTCCGGGTACGGGCTCTGGTGAAGGGCATGGGTCGGGAAGAGGTGGTGGGTCGGGTCGATAG
Protein sequenceShow/hide protein sequence
MARPGIFLCFLALIITSSFALQQPNAGGGTKTITGRGGGGGGGGGSSSGPGTGSGEGHGSGRGGGSGR