; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G018090 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G018090
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionglycine-rich cell wall structural protein
Genome locationchr05:25342336..25344198
RNA-Seq ExpressionLsi05G018090
SyntenyLsi05G018090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049179.1 putative PE-PGRS family protein PE_PGRS46 [Cucumis melo var. makuwa]9.2e-4476.76Show/hide
Query:  MEKLFVMLLLVAIAAARSVPRGDQVEFVDAVEVKAAELP----TGGAVRDEKNFIYGGIGGFAGMGGYAGMGGLPMLGGAAGIGKFGGIGGVAGIGSLGG
        MEKLFV+ LLVAIAAAR VP GDQ EFV+AVEVKAAELP     G  VRDEKNFIYGG+GGFAGMGGYAG+GG PMLGG+AGIGKFGGIGGVAGIGSLG 
Subjt:  MEKLFVMLLLVAIAAARSVPRGDQVEFVDAVEVKAAELP----TGGAVRDEKNFIYGGIGGFAGMGGYAGMGGLPMLGGAAGIGKFGGIGGVAGIGSLGG

Query:  PGGLGGGGAGGGGGLGGGGANGIGGLAGHGLGGA---GGLAGHGLGGAGGVGGGS---GVGGSSGGVGGDGGAGGG-PVSGAVPP
        PGGLGGG        G GGA+GIGGLAGHGLGGA   GGLAGHGLGGAGG+G GS   G+GGS+GG+GGDGGAGGG PVSG++ P
Subjt:  PGGLGGGGAGGGGGLGGGGANGIGGLAGHGLGGA---GGLAGHGLGGAGGVGGGS---GVGGSSGGVGGDGGAGGG-PVSGAVPP

KAE8650313.1 hypothetical protein Csa_010764 [Cucumis sativus]1.3e-4279.33Show/hide
Query:  MLLLVAIAAARSVPRGDQVEFVDAVEVKAAELP----TGGAVRDEKNFIYGGIGGFAGMGGYAGMGGLPMLGGAAGIGKFGGIGGVAGIGSLGGPGGLGG
        M LLVA+AAAR VP GDQ EFV+AVEVKAAELP     G AVRDEKNFIYGG+GGFAGMGGYAG+GGLPMLGG+AGIGKFGGIGGVAGIGSLG PGGLGG
Subjt:  MLLLVAIAAARSVPRGDQVEFVDAVEVKAAELP----TGGAVRDEKNFIYGGIGGFAGMGGYAGMGGLPMLGGAAGIGKFGGIGGVAGIGSLGGPGGLGG

Query:  GGAGGGGGLGGGGANGIGGLAGHGLGGA---GGLAGHGLGGAGGVGGGS---GVGGSSGGVGGDGGAGGG-PVSGAVPP
        GGAG     G GGA+GIGGLAGHGLGGA   GGLAGHGLGGAGGVG GS   G+GGS+GG+GGDGGAGGG PVSG++ P
Subjt:  GGAGGGGGLGGGGANGIGGLAGHGLGGA---GGLAGHGLGGAGGVGGGS---GVGGSSGGVGGDGGAGGG-PVSGAVPP

XP_008439361.1 PREDICTED: uncharacterized PE-PGRS family protein PE_PGRS46 [Cucumis melo]2.7e-4376.22Show/hide
Query:  MEKLFVMLLLVAIAAARSVPRGDQVEFVDAVEVKAAELP----TGGAVRDEKNFIYGGIGGFAGMGGYAGMGGLPMLGGAAGIGKFGGIGGVAGIGSLGG
        MEKLFV+ LLVAIAAAR VP GDQ EFV+AVEVKA ELP     G  VRDEKNFIYGG+GGFAGMGGYAG+GG PMLGG+AGIGKFGGIGGVAGIGSLG 
Subjt:  MEKLFVMLLLVAIAAARSVPRGDQVEFVDAVEVKAAELP----TGGAVRDEKNFIYGGIGGFAGMGGYAGMGGLPMLGGAAGIGKFGGIGGVAGIGSLGG

Query:  PGGLGGGGAGGGGGLGGGGANGIGGLAGHGLGGA---GGLAGHGLGGAGGVGGGS---GVGGSSGGVGGDGGAGGG-PVSGAVPP
        PGGLGGG        G GGA+GIGGLAGHGLGGA   GGLAGHGLGGAGG+G GS   G+GGS+GG+GGDGGAGGG PVSG++ P
Subjt:  PGGLGGGGAGGGGGLGGGGANGIGGLAGHGLGGA---GGLAGHGLGGAGGVGGGS---GVGGSSGGVGGDGGAGGG-PVSGAVPP

XP_011652752.1 glycine-rich protein 23 [Cucumis sativus]7.6e-4680Show/hide
Query:  MEKLFVMLLLVAIAAARSVPRGDQVEFVDAVEVKAAELP----TGGAVRDEKNFIYGGIGGFAGMGGYAGMGGLPMLGGAAGIGKFGGIGGVAGIGSLGG
        MEKLFVM LLVA+AAAR VP GDQ EFV+AVEVKAAELP     G AVRDEKNFIYGG+GGFAGMGGYAG+GGLPMLGG+AGIGKFGGIGGVAGIGSLG 
Subjt:  MEKLFVMLLLVAIAAARSVPRGDQVEFVDAVEVKAAELP----TGGAVRDEKNFIYGGIGGFAGMGGYAGMGGLPMLGGAAGIGKFGGIGGVAGIGSLGG

Query:  PGGLGGGGAGGGGGLGGGGANGIGGLAGHGLGGA---GGLAGHGLGGAGGVGGGS---GVGGSSGGVGGDGGAGGG-PVSGAVPP
        PGGLGGGGAG     G GGA+GIGGLAGHGLGGA   GGLAGHGLGGAGGVG GS   G+GGS+GG+GGDGGAGGG PVSG++ P
Subjt:  PGGLGGGGAGGGGGLGGGGANGIGGLAGHGLGGA---GGLAGHGLGGAGGVGGGS---GVGGSSGGVGGDGGAGGG-PVSGAVPP

XP_022974868.1 glycine-rich cell wall structural protein [Cucurbita maxima]2.2e-3767.79Show/hide
Query:  MEKLFVMLLLVAIAAARSVPRGDQVEFVDAVEVKAAELPT--GGAVRDEKNFIYGGIGGFAGMGGYAGMGGLPMLGGAAGIGKFGGIGGVAGIGSLGGPG
        MEKLFVML L  +AAAR+VP  +QV+FVDAVEVKAAELPT  GGAVRDEKNFIYGG+GGFAGMGGYAG+ G+PMLGG+AGIGKFGGIGG AGIG  GG G
Subjt:  MEKLFVMLLLVAIAAARSVPRGDQVEFVDAVEVKAAELPT--GGAVRDEKNFIYGGIGGFAGMGGYAGMGGLPMLGGAAGIGKFGGIGGVAGIGSLGGPG

Query:  GLGGGGAGGGGGLGG------GGANGIGGLAGHGLGGAGGLA-----------------GHGLGGAGGVG---------GGSGVGGSSGGVGGDGGAGGG
        G+GGGG GGGGG+GG      GGA GIGGLAGHGLGGAGG+                  GHGLGGAGGVG         GG+G  G SGG GGDGGAGG 
Subjt:  GLGGGGAGGGGGLGG------GGANGIGGLAGHGLGGAGGLA-----------------GHGLGGAGGVG---------GGSGVGGSSGGVGGDGGAGGG

Query:  PVSGAVPP
        PV G+V P
Subjt:  PVSGAVPP

TrEMBL top hitse value%identityAlignment
A0A0A0L460 Uncharacterized protein2.2e-3874.59Show/hide
Query:  MEKLFVMLLLVAIAAARSVPRGDQVEFVDAVEVKAAELP----TGGAVRDEKNFIYGGIGGFAGMGGYAGMGGLPMLGGAAGIGKFGGIGGVAGIGSLGG
        MEKLFVM LLVA+AAAR VP GDQ EFV+AVEVKAAELP     G AVRDEKNFIYGG+          G+GGLPMLGG+AGIGKFGGIGGVAGIGSLG 
Subjt:  MEKLFVMLLLVAIAAARSVPRGDQVEFVDAVEVKAAELP----TGGAVRDEKNFIYGGIGGFAGMGGYAGMGGLPMLGGAAGIGKFGGIGGVAGIGSLGG

Query:  PGGLGGGGAGGGGGLGGGGANGIGGLAGHGLGGA---GGLAGHGLGGAGGVGGGS---GVGGSSGGVGGDGGAGGG-PVSGAVPP
        PGGLGGGGAG     G GGA+GIGGLAGHGLGGA   GGLAGHGLGGAGGVG GS   G+GGS+GG+GGDGGAGGG PVSG++ P
Subjt:  PGGLGGGGAGGGGGLGGGGANGIGGLAGHGLGGA---GGLAGHGLGGAGGVGGGS---GVGGSSGGVGGDGGAGGG-PVSGAVPP

A0A1S3AYL0 uncharacterized PE-PGRS family protein PE_PGRS461.3e-4376.22Show/hide
Query:  MEKLFVMLLLVAIAAARSVPRGDQVEFVDAVEVKAAELP----TGGAVRDEKNFIYGGIGGFAGMGGYAGMGGLPMLGGAAGIGKFGGIGGVAGIGSLGG
        MEKLFV+ LLVAIAAAR VP GDQ EFV+AVEVKA ELP     G  VRDEKNFIYGG+GGFAGMGGYAG+GG PMLGG+AGIGKFGGIGGVAGIGSLG 
Subjt:  MEKLFVMLLLVAIAAARSVPRGDQVEFVDAVEVKAAELP----TGGAVRDEKNFIYGGIGGFAGMGGYAGMGGLPMLGGAAGIGKFGGIGGVAGIGSLGG

Query:  PGGLGGGGAGGGGGLGGGGANGIGGLAGHGLGGA---GGLAGHGLGGAGGVGGGS---GVGGSSGGVGGDGGAGGG-PVSGAVPP
        PGGLGGG        G GGA+GIGGLAGHGLGGA   GGLAGHGLGGAGG+G GS   G+GGS+GG+GGDGGAGGG PVSG++ P
Subjt:  PGGLGGGGAGGGGGLGGGGANGIGGLAGHGLGGA---GGLAGHGLGGAGGVGGGS---GVGGSSGGVGGDGGAGGG-PVSGAVPP

A0A5D3CZJ9 Putative PE-PGRS family protein PE_PGRS464.5e-4476.76Show/hide
Query:  MEKLFVMLLLVAIAAARSVPRGDQVEFVDAVEVKAAELP----TGGAVRDEKNFIYGGIGGFAGMGGYAGMGGLPMLGGAAGIGKFGGIGGVAGIGSLGG
        MEKLFV+ LLVAIAAAR VP GDQ EFV+AVEVKAAELP     G  VRDEKNFIYGG+GGFAGMGGYAG+GG PMLGG+AGIGKFGGIGGVAGIGSLG 
Subjt:  MEKLFVMLLLVAIAAARSVPRGDQVEFVDAVEVKAAELP----TGGAVRDEKNFIYGGIGGFAGMGGYAGMGGLPMLGGAAGIGKFGGIGGVAGIGSLGG

Query:  PGGLGGGGAGGGGGLGGGGANGIGGLAGHGLGGA---GGLAGHGLGGAGGVGGGS---GVGGSSGGVGGDGGAGGG-PVSGAVPP
        PGGLGGG        G GGA+GIGGLAGHGLGGA   GGLAGHGLGGAGG+G GS   G+GGS+GG+GGDGGAGGG PVSG++ P
Subjt:  PGGLGGGGAGGGGGLGGGGANGIGGLAGHGLGGA---GGLAGHGLGGAGGVGGGS---GVGGSSGGVGGDGGAGGG-PVSGAVPP

A0A6J1G005 glycine-rich cell wall structural protein 1 isoform X28.7e-3264.8Show/hide
Query:  MEKLFVMLLLVAIA---AARSVPRGDQVEFVDAVEVKAAELPTGG--AVRDEKNFIYGGIGGFAGMGGYAGMGGLPMLGGAAGIGKFGGIGGVAGIGSLG
        MEKLFVML L  +A   AAR+VP  ++V+FVDAV+VKAAEL   G  A RDEK FIYGG+GGFAGMGGYAG+ G+PMLGG+AGIGKFGGIGG AGIG  G
Subjt:  MEKLFVMLLLVAIA---AARSVPRGDQVEFVDAVEVKAAELPTGG--AVRDEKNFIYGGIGGFAGMGGYAGMGGLPMLGGAAGIGKFGGIGGVAGIGSLG

Query:  GPGGLGGGGAGGGGGLGG------GGANGIGGLAGHGLGGAGGLA---GHGLGGAGGVGGGSGVGGSSGGVGGDGGAGGG--------PVSGAVPP
        G GG+GGGG GGGGG+GG      GGA GIGG+ GHGLGG GG+    GHGLGGAGGVGG  G    +GG GG GG+GGG        PV G+V P
Subjt:  GPGGLGGGGAGGGGGLGG------GGANGIGGLAGHGLGGAGGLA---GHGLGGAGGVGGGSGVGGSSGGVGGDGGAGGG--------PVSGAVPP

A0A6J1IHK9 glycine-rich cell wall structural protein1.1e-3767.79Show/hide
Query:  MEKLFVMLLLVAIAAARSVPRGDQVEFVDAVEVKAAELPT--GGAVRDEKNFIYGGIGGFAGMGGYAGMGGLPMLGGAAGIGKFGGIGGVAGIGSLGGPG
        MEKLFVML L  +AAAR+VP  +QV+FVDAVEVKAAELPT  GGAVRDEKNFIYGG+GGFAGMGGYAG+ G+PMLGG+AGIGKFGGIGG AGIG  GG G
Subjt:  MEKLFVMLLLVAIAAARSVPRGDQVEFVDAVEVKAAELPT--GGAVRDEKNFIYGGIGGFAGMGGYAGMGGLPMLGGAAGIGKFGGIGGVAGIGSLGGPG

Query:  GLGGGGAGGGGGLGG------GGANGIGGLAGHGLGGAGGLA-----------------GHGLGGAGGVG---------GGSGVGGSSGGVGGDGGAGGG
        G+GGGG GGGGG+GG      GGA GIGGLAGHGLGGAGG+                  GHGLGGAGGVG         GG+G  G SGG GGDGGAGG 
Subjt:  GLGGGGAGGGGGLGG------GGANGIGGLAGHGLGGAGGLA-----------------GHGLGGAGGVG---------GGSGVGGSSGGVGGDGGAGGG

Query:  PVSGAVPP
        PV G+V P
Subjt:  PVSGAVPP

SwissProt top hitse value%identityAlignment
O48848 Glycine-rich protein 233.9e-0559.17Show/hide
Query:  GGIGGFAGMGGYAGMGGLPMLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGGGGLGGGGANGIGGLAGHGLGGAGGL-AGHGLGGAGGVGGGSGVG
        GG+GG  G+GG  G+GG   LGG +G+G  GG+GG +G+G  GG GG GGGG GGGGGLGGG   G GG AG GLGG GG+  G G GG GG G G G G
Subjt:  GGIGGFAGMGGYAGMGGLPMLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGGGGLGGGGANGIGGLAGHGLGGAGGL-AGHGLGGAGGVGGGSGVG

Query:  GSSG-GVGGDGGAGGGPVSG
        G  G G+GG GG GGG V G
Subjt:  GSSG-GVGGDGGAGGGPVSG

Arabidopsis top hitse value%identityAlignment
AT1G04660.1 glycine-rich protein7.9e-0950Show/hide
Query:  LFVMLLLVAI----AAARSVP--------RGDQVEFVDAVEVKAAELPTGGAVRDEKNF-IYGGIGGFAGMGGYAGMGGL--PMLGGAAGIGKFGGIGGV
        L V+ +L+AI    A AR VP         G        +  KAA+     +V D+K      G+GGFAG+GG AG+GGL  P++GG  GIGK+GGIGG 
Subjt:  LFVMLLLVAI----AAARSVP--------RGDQVEFVDAVEVKAAELPTGGAVRDEKNF-IYGGIGGFAGMGGYAGMGGL--PMLGGAAGIGKFGGIGGV

Query:  AGIG---SLGGPGGLG--GGGAGGGGGLGG--GGANGIGGLAGHGLGGAGGLAGHGLGGAGGVGGGSGVGGSSGGVGGDGG---AGGGPVSGAV
        AGIG   S+GG GGLG  GGG GG GG+GG  GG  G+GGL G GLGG GG+ G G+G AGG+GG  G+GG+ GG+GG GG   AGG  V G +
Subjt:  AGIG---SLGGPGGLG--GGGAGGGGGLGG--GGANGIGGLAGHGLGGAGGLAGHGLGGAGGVGGGSGVGGSSGGVGGDGG---AGGGPVSGAV

AT2G32690.1 glycine-rich protein 232.8e-0659.17Show/hide
Query:  GGIGGFAGMGGYAGMGGLPMLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGGGGLGGGGANGIGGLAGHGLGGAGGL-AGHGLGGAGGVGGGSGVG
        GG+GG  G+GG  G+GG   LGG +G+G  GG+GG +G+G  GG GG GGGG GGGGGLGGG   G GG AG GLGG GG+  G G GG GG G G G G
Subjt:  GGIGGFAGMGGYAGMGGLPMLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGGGGLGGGGANGIGGLAGHGLGGAGGL-AGHGLGGAGGVGGGSGVG

Query:  GSSG-GVGGDGGAGGGPVSG
        G  G G+GG GG GGG V G
Subjt:  GSSG-GVGGDGGAGGGPVSG

AT2G32690.3 glycine-rich protein 235.8e-0456.78Show/hide
Query:  GGIGGFAGMGGYAGMGGLPMLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGGGGLGGGGANGIGGLAGHGLGGAGGLAGHGLGGAGGVGGGSGVGG
        GG+GG  G+GG  G+GG   LGG +G+G  GG+GG +G+G  GG GG GGGG GGGGG GGG   G+GG  G G+GG GG  G   GG GG GGG+G GG
Subjt:  GGIGGFAGMGGYAGMGGLPMLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGGGGLGGGGANGIGGLAGHGLGGAGGLAGHGLGGAGGVGGGSGVGG

Query:  SSGGVGGDGGAGGGPVSG
           G+GG GG GGG V G
Subjt:  SSGGVGGDGGAGGGPVSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGCTTTTTGTAATGCTTTTGTTGGTCGCAATTGCGGCGGCGCGTAGCGTTCCGCGCGGTGATCAGGTGGAGTTCGTGGACGCGGTTGAAGTGAAGGCGGCGGA
GCTGCCGACTGGTGGTGCTGTTCGTGACGAGAAGAATTTTATCTACGGCGGAATTGGCGGCTTTGCTGGCATGGGCGGATACGCAGGGATGGGAGGGTTGCCGATGCTGG
GGGGCGCCGCTGGGATCGGAAAATTTGGTGGAATTGGTGGGGTTGCTGGAATTGGTAGCTTGGGTGGCCCCGGCGGTCTGGGCGGCGGAGGAGCTGGTGGTGGCGGCGGT
TTGGGTGGCGGAGGAGCTAACGGAATCGGCGGTTTAGCTGGGCATGGACTTGGCGGAGCTGGTGGTCTAGCTGGGCATGGACTTGGTGGAGCTGGCGGTGTTGGAGGTGG
CAGTGGCGTCGGGGGATCCAGCGGCGGTGTCGGAGGAGATGGTGGAGCTGGCGGAGGTCCGGTCAGTGGTGCAGTTCCCCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGCTTTTTGTAATGCTTTTGTTGGTCGCAATTGCGGCGGCGCGTAGCGTTCCGCGCGGTGATCAGGTGGAGTTCGTGGACGCGGTTGAAGTGAAGGCGGCGGA
GCTGCCGACTGGTGGTGCTGTTCGTGACGAGAAGAATTTTATCTACGGCGGAATTGGCGGCTTTGCTGGCATGGGCGGATACGCAGGGATGGGAGGGTTGCCGATGCTGG
GGGGCGCCGCTGGGATCGGAAAATTTGGTGGAATTGGTGGGGTTGCTGGAATTGGTAGCTTGGGTGGCCCCGGCGGTCTGGGCGGCGGAGGAGCTGGTGGTGGCGGCGGT
TTGGGTGGCGGAGGAGCTAACGGAATCGGCGGTTTAGCTGGGCATGGACTTGGCGGAGCTGGTGGTCTAGCTGGGCATGGACTTGGTGGAGCTGGCGGTGTTGGAGGTGG
CAGTGGCGTCGGGGGATCCAGCGGCGGTGTCGGAGGAGATGGTGGAGCTGGCGGAGGTCCGGTCAGTGGTGCAGTTCCCCCATAA
Protein sequenceShow/hide protein sequence
MEKLFVMLLLVAIAAARSVPRGDQVEFVDAVEVKAAELPTGGAVRDEKNFIYGGIGGFAGMGGYAGMGGLPMLGGAAGIGKFGGIGGVAGIGSLGGPGGLGGGGAGGGGG
LGGGGANGIGGLAGHGLGGAGGLAGHGLGGAGGVGGGSGVGGSSGGVGGDGGAGGGPVSGAVPP