; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G018520 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G018520
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptiontranslation machinery-associated protein 7-like
Genome locationchr05:25757977..25760048
RNA-Seq ExpressionLsi05G018520
SyntenyLsi05G018520
Gene Ontology termsNA
InterPro domainsIPR015157 - Translation machinery associated TMA7


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049143.1 F9L1.21 protein [Cucumis melo var. makuwa]2.2e-1349.56Show/hide
Query:  PVIILKKPSIIAIGQSLFVFFFDSGQTLTISQPCRPSKVRIDLLSVLFRFHLRYGGKAKPLKQPKVDKKDYDE--------------AIRELRAKAQQKG
        PV+I+KKPSI+A          +    L +     P+   I  +S       + GGKAKPLKQPKVDKKDYDE              A++ELRAKAQQKG
Subjt:  PVIILKKPSIIAIGQSLFVFFFDSGQTLTISQPCRPSKVRIDLLSVLFRFHLRYGGKAKPLKQPKVDKKDYDE--------------AIRELRAKAQQKG

Query:  TFGGAGLKKSGKK
        TFGGAGLKKSGKK
Subjt:  TFGGAGLKKSGKK

KGN56723.1 hypothetical protein Csa_009747 [Cucumis sativus]8.2e-1349.56Show/hide
Query:  PVIILKKPSIIAIGQSLFVFFFDSGQTLTISQPCRPSKVRIDLLSVLFRFHLRYGGKAKPLKQPKVDKKDYDE--------------AIRELRAKAQQKG
        PV+IL+KPSI+A          +    L +     P+   I  +S       + GGKAKPLKQPKVDKKDYDE              A++ELRAKAQQKG
Subjt:  PVIILKKPSIIAIGQSLFVFFFDSGQTLTISQPCRPSKVRIDLLSVLFRFHLRYGGKAKPLKQPKVDKKDYDE--------------AIRELRAKAQQKG

Query:  TFGGAGLKKSGKK
        TFGGAGLKKSGKK
Subjt:  TFGGAGLKKSGKK

XP_020866391.1 translation machinery-associated protein 7 isoform X2 [Arabidopsis lyrata subsp. lyrata]3.1e-1260Show/hide
Query:  ISQPCRPSKVRIDLLSVLFRFHLRYGGKAKPLKQPKVDKKDYDEAIRELRAKAQQKGTFGGAGLKKSGKK
        +S    PS     ++S       + GGKAKPLKQPK DKK+YDEA++ELRAKA QKG+FGG+GLKKSGKK
Subjt:  ISQPCRPSKVRIDLLSVLFRFHLRYGGKAKPLKQPKVDKKDYDEAIRELRAKAQQKGTFGGAGLKKSGKK

XP_022924253.1 translation machinery-associated protein 7-like [Cucurbita moschata]2.4e-1252.63Show/hide
Query:  VFFFDSGQTLTISQPCRPSKVRIDLLSVLFRFHLRYGGKAKPLKQPKVDKKDYDE--------------AIRELRAKAQQKGTFGGAGLKKSGKK
        V  FDSG + ++     P+   I  +S       + GGKAKPLKQPKV+KKDYDE              A+RELRAKAQQKG FGGAGLKKSGKK
Subjt:  VFFFDSGQTLTISQPCRPSKVRIDLLSVLFRFHLRYGGKAKPLKQPKVDKKDYDE--------------AIRELRAKAQQKGTFGGAGLKKSGKK

XP_022980452.1 translation machinery-associated protein 7-like [Cucurbita maxima]1.1e-1253.68Show/hide
Query:  VFFFDSGQTLTISQPCRPSKVRIDLLSVLFRFHLRYGGKAKPLKQPKVDKKDYDE--------------AIRELRAKAQQKGTFGGAGLKKSGKK
        V  FDSG   ++    RP+   I  +S       + GGKAKPLKQPKV+KKDYDE              A+RELRAKAQQKG FGGAGLKKSGKK
Subjt:  VFFFDSGQTLTISQPCRPSKVRIDLLSVLFRFHLRYGGKAKPLKQPKVDKKDYDE--------------AIRELRAKAQQKGTFGGAGLKKSGKK

TrEMBL top hitse value%identityAlignment
A0A0A0L4M8 F9L1.21 protein4.0e-1349.56Show/hide
Query:  PVIILKKPSIIAIGQSLFVFFFDSGQTLTISQPCRPSKVRIDLLSVLFRFHLRYGGKAKPLKQPKVDKKDYDE--------------AIRELRAKAQQKG
        PV+IL+KPSI+A          +    L +     P+   I  +S       + GGKAKPLKQPKVDKKDYDE              A++ELRAKAQQKG
Subjt:  PVIILKKPSIIAIGQSLFVFFFDSGQTLTISQPCRPSKVRIDLLSVLFRFHLRYGGKAKPLKQPKVDKKDYDE--------------AIRELRAKAQQKG

Query:  TFGGAGLKKSGKK
        TFGGAGLKKSGKK
Subjt:  TFGGAGLKKSGKK

A0A5A7TZV6 F9L1.21 protein1.0e-1349.56Show/hide
Query:  PVIILKKPSIIAIGQSLFVFFFDSGQTLTISQPCRPSKVRIDLLSVLFRFHLRYGGKAKPLKQPKVDKKDYDE--------------AIRELRAKAQQKG
        PV+I+KKPSI+A          +    L +     P+   I  +S       + GGKAKPLKQPKVDKKDYDE              A++ELRAKAQQKG
Subjt:  PVIILKKPSIIAIGQSLFVFFFDSGQTLTISQPCRPSKVRIDLLSVLFRFHLRYGGKAKPLKQPKVDKKDYDE--------------AIRELRAKAQQKG

Query:  TFGGAGLKKSGKK
        TFGGAGLKKSGKK
Subjt:  TFGGAGLKKSGKK

A0A6J1EBW2 translation machinery-associated protein 7-like1.2e-1252.63Show/hide
Query:  VFFFDSGQTLTISQPCRPSKVRIDLLSVLFRFHLRYGGKAKPLKQPKVDKKDYDE--------------AIRELRAKAQQKGTFGGAGLKKSGKK
        V  FDSG + ++     P+   I  +S       + GGKAKPLKQPKV+KKDYDE              A+RELRAKAQQKG FGGAGLKKSGKK
Subjt:  VFFFDSGQTLTISQPCRPSKVRIDLLSVLFRFHLRYGGKAKPLKQPKVDKKDYDE--------------AIRELRAKAQQKGTFGGAGLKKSGKK

A0A6J1IRF0 translation machinery-associated protein 7-like5.2e-1353.68Show/hide
Query:  VFFFDSGQTLTISQPCRPSKVRIDLLSVLFRFHLRYGGKAKPLKQPKVDKKDYDE--------------AIRELRAKAQQKGTFGGAGLKKSGKK
        V  FDSG   ++    RP+   I  +S       + GGKAKPLKQPKV+KKDYDE              A+RELRAKAQQKG FGGAGLKKSGKK
Subjt:  VFFFDSGQTLTISQPCRPSKVRIDLLSVLFRFHLRYGGKAKPLKQPKVDKKDYDE--------------AIRELRAKAQQKGTFGGAGLKKSGKK

M5X8F9 Uncharacterized protein (Fragment)2.6e-1251.35Show/hide
Query:  KKPSIIAIGQS---LFVFFFDSGQTLTISQPCRPSKVRIDLLSVLFRFHLRYGGKAKPLKQPKVDKKDYDE--------------AIRELRAKAQQKGTF
        K   IIA+G S   L    FD    L  SQPC PSKVR               GKAKPLKQPK +KK+YDE              A++ELRAKAQQKG+F
Subjt:  KKPSIIAIGQS---LFVFFFDSGQTLTISQPCRPSKVRIDLLSVLFRFHLRYGGKAKPLKQPKVDKKDYDE--------------AIRELRAKAQQKGTF

Query:  GGAGLKKSGKK
        GGAGLKKSGKK
Subjt:  GGAGLKKSGKK

SwissProt top hitse value%identityAlignment
Q05AK9 Translation machinery-associated protein 75.5e-0445.9Show/hide
Query:  RYGGKAKPLKQPKVDKKDYDE--------------AIRELRAKAQQKGTFGGAGLKKSGKK
        R GGK KPLK PK   K+ DE              A+ +L+AKA  KG   G G+KKSGKK
Subjt:  RYGGKAKPLKQPKVDKKDYDE--------------AIRELRAKAQQKGTFGGAGLKKSGKK

Q28GR1 Translation machinery-associated protein 76.5e-0547.54Show/hide
Query:  RYGGKAKPLKQPKVDKKDYDE--------------AIRELRAKAQQKGTFGGAGLKKSGKK
        R GGK KPLKQPK   KD DE               + E++ KA QKG   G G+KKSGKK
Subjt:  RYGGKAKPLKQPKVDKKDYDE--------------AIRELRAKAQQKGTFGGAGLKKSGKK

Q4SUE2 Translation machinery-associated protein 71.5e-0445.9Show/hide
Query:  RYGGKAKPLKQPKVDKKDYDE--------------AIRELRAKAQQKGTFGGAGLKKSGKK
        R GGK KPLK PK   KD D+              A+  L+A+A  KG  GG+G+KKSGKK
Subjt:  RYGGKAKPLKQPKVDKKDYDE--------------AIRELRAKAQQKGTFGGAGLKKSGKK

Q60QR6 Translation machinery-associated protein 7 homolog2.5e-0447.54Show/hide
Query:  RYGGKAKPLKQPKVDKKDYDE--------------AIRELRAKAQQKGTFGGAGLKKSGKK
        R GGKAKPLK PK  +KD  E               I+E+ AKA Q+G   G G+KKSGKK
Subjt:  RYGGKAKPLKQPKVDKKDYDE--------------AIRELRAKAQQKGTFGGAGLKKSGKK

Q9XZS3 Translation machinery-associated protein 7 homolog4.2e-0445.9Show/hide
Query:  RYGGKAKPLKQPKVDKKDYDE--------------AIRELRAKAQQKGTFGGAGLKKSGKK
        R GGK KPLK PK D KD DE              A+   +A A +KG   G G+KKSGKK
Subjt:  RYGGKAKPLKQPKVDKKDYDE--------------AIRELRAKAQQKGTFGGAGLKKSGKK

Arabidopsis top hitse value%identityAlignment
AT1G15270.1 Translation machinery associated TMA78.7e-1362.3Show/hide
Query:  RYGGKAKPLKQPKVDKKDYDE--------------AIRELRAKAQQKGTFGGAGLKKSGKK
        + GGKAKPLKQPK DKK+YDE              A++ELRAKA QKG+FGG+GLKKSGKK
Subjt:  RYGGKAKPLKQPKVDKKDYDE--------------AIRELRAKAQQKGTFGGAGLKKSGKK

AT3G16040.1 Translation machinery associated TMA73.7e-1159.02Show/hide
Query:  RYGGKAKPLKQPKVDKKDYDE--------------AIRELRAKAQQKGTFGGAGLKKSGKK
        + GGK KPLKQPK  KK+YDE              A++ELRAKA QKG+FGG+GLKKSGKK
Subjt:  RYGGKAKPLKQPKVDKKDYDE--------------AIRELRAKAQQKGTFGGAGLKKSGKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCGGTCATTATACTTAAGAAGCCGTCAATTATTGCGATCGGGCAGTCCCTCTTTGTGTTCTTCTTCGACTCGGGCCAAACCCTAACGATATCTCAGCCATGTCGTCCAAG
CAAGGTACGAATCGATCTATTGAGCGTTCTTTTTCGATTTCATCTTCGTTACGGAGGGAAAGCTAAGCCTCTGAAGCAACCCAAGGTTGATAAGAAAGACTACGACGAGG
CGATCAGGGAGCTTAGAGCAAAGGCCCAACAGAAGGGGACCTTTGGAGGTGCTGGGCTCAAGAAAAGTGGGAAGAAGTGA
mRNA sequenceShow/hide mRNA sequence
CCGGTCATTATACTTAAGAAGCCGTCAATTATTGCGATCGGGCAGTCCCTCTTTGTGTTCTTCTTCGACTCGGGCCAAACCCTAACGATATCTCAGCCATGTCGTCCAAG
CAAGGTACGAATCGATCTATTGAGCGTTCTTTTTCGATTTCATCTTCGTTACGGAGGGAAAGCTAAGCCTCTGAAGCAACCCAAGGTTGATAAGAAAGACTACGACGAGG
CGATCAGGGAGCTTAGAGCAAAGGCCCAACAGAAGGGGACCTTTGGAGGTGCTGGGCTCAAGAAAAGTGGGAAGAAGTGATGGGTTCCCACGCAAAAACATGGAGGTAGA
TTACTTGACGACCTGAAATTGCAGACATTTAATGGCTTTTGAATCAGTTGCTTGTCTTTGTGTTCCCTGTAAAACCCTGGAAAGAAGATAATATGCTGTGGAATTATTAT
AGAAGTTGAACGCTTCTCAATATTCTGAACTTTCTTTAGCTTTAATATATGCTTCTCAATATTCTGAGCTTTCTTTAGCTTTAATATTCTGAACTTTTCTTTTTTTGTTC
TTTCCCCTCTCTCTCTCAACTTTTTTTTTTCCTTTTTTAAAAAAAAAAAATGGGAAAAGATATTCTAAACAATCTCTAGACTTGGGGCTAAATGAAATGAATTGTTTGGC
ACTGTTTGGCGAAGGGTTATTTTTGGGGTCAAGAATTTATCATTGGGTTTGCATTGTGGTCGGGAG
Protein sequenceShow/hide protein sequence
PVIILKKPSIIAIGQSLFVFFFDSGQTLTISQPCRPSKVRIDLLSVLFRFHLRYGGKAKPLKQPKVDKKDYDEAIRELRAKAQQKGTFGGAGLKKSGKK