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Lsi05G018750 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G018750
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptioncytochrome c oxidase-assembly factor COX23, mitochondrial
Genome locationchr05:25952645..25955415
RNA-Seq ExpressionLsi05G018750
SyntenyLsi05G018750
Gene Ontology termsNA
InterPro domainsIPR009069 - Cysteine alpha-hairpin motif superfamily
IPR010625 - CHCH


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049122.1 cytochrome c oxidase-assembly factor COX23 [Cucumis melo var. makuwa]4.4e-2287.5Show/hide
Query:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEESVNID
        MASTSRDPAPPYASAARISDSPCYPQYSASLKCLE +SSEKSKCQEHFDVYKECKKKE    ++
Subjt:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEESVNID
XP_004133972.1 cytochrome c oxidase-assembly factor COX23, mitochondrial [Cucumis sativus]7.5e-2285.94Show/hide
Query:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEESVNID
        MASTSRDP PPY SAARISDSPCYPQYSASLKCLE HSSEKSKCQEHFDVYKECKKKE    ++
Subjt:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEESVNID
XP_022147041.1 cytochrome c oxidase-assembly factor COX23, mitochondrial [Momordica charantia]4.4e-2285.94Show/hide
Query:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEESVNID
        MAST+RD APPYASAARISDSPCYPQYSASLKCLEEHSSEK+KCQEHFDVYKECKKKE    ++
Subjt:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEESVNID
XP_022924627.1 cytochrome c oxidase-assembly factor COX23, mitochondrial [Cucurbita moschata]5.7e-2284.38Show/hide
Query:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEESVNID
        MASTSRDP+PPY SAARISDSPC+PQYSASLKCLEEHSSE+SKCQEHFDVYKECKKKE    ++
Subjt:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEESVNID
XP_038906947.1 cytochrome c oxidase-assembly factor COX23, mitochondrial [Benincasa hispida]6.8e-2387.5Show/hide
Query:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEESVNID
        MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEH+SEKSKC+EHFDVYKECKKKE    ++
Subjt:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEESVNID
TrEMBL top hitse value%identityAlignment
A0A0A0L4K5 CHCH domain-containing protein3.6e-2285.94Show/hide
Query:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEESVNID
        MASTSRDP PPY SAARISDSPCYPQYSASLKCLE HSSEKSKCQEHFDVYKECKKKE    ++
Subjt:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEESVNID
A0A5A7U004 Cytochrome c oxidase-assembly factor COX232.1e-2287.5Show/hide
Query:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEESVNID
        MASTSRDPAPPYASAARISDSPCYPQYSASLKCLE +SSEKSKCQEHFDVYKECKKKE    ++
Subjt:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEESVNID
A0A6J1D157 cytochrome c oxidase-assembly factor COX23, mitochondrial2.1e-2285.94Show/hide
Query:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEESVNID
        MAST+RD APPYASAARISDSPCYPQYSASLKCLEEHSSEK+KCQEHFDVYKECKKKE    ++
Subjt:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEESVNID
A0A6J1E9H8 cytochrome c oxidase-assembly factor COX23, mitochondrial2.8e-2284.38Show/hide
Query:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEESVNID
        MASTSRDP+PPY SAARISDSPC+PQYSASLKCLEEHSSE+SKCQEHFDVYKECKKKE    ++
Subjt:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEESVNID
A0A6J1ITM4 cytochrome c oxidase-assembly factor COX23, mitochondrial6.9e-2182.81Show/hide
Query:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEESVNID
        MASTSRDP PPY SAARISDSPC+ QYSASLKCLEEHSSE+SKCQEHFDVYKECKKKE    ++
Subjt:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEESVNID
SwissProt top hitse value%identityAlignment
P38824 Cytochrome c oxidase-assembly factor COX23, mitochondrial9.6e-0450Show/hide
Query:  PCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKK
        PC      S +CLE +  ++SKCQE+FD Y+ECKK+
Subjt:  PCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKK
Arabidopsis top hitse value%identityAlignment
AT1G02160.1 Cox19 family protein (CHCH motif)1.2e-1768.85Show/hide
Query:  TSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEESVNID
        +++  A  Y SAARISDSPCY QYSASLKCLEE  S+KSKCQ+HFDVYKECKKKE    ++
Subjt:  TSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEESVNID
AT1G02160.2 Cox19 family protein (CHCH motif)3.5e-1776.36Show/hide
Query:  TSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKE
        +++  A  Y SAARISDSPCY QYSASLKCLEE  S+KSKCQ+HFDVYKECKKKE
Subjt:  TSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCACTTCTAGGGATCCGGCTCCGCCGTACGCCAGTGCTGCTAGAATTTCCGATTCTCCTTGTTATCCTCAGTACAGCGCTTCCCTGAAATGTCTTGAAGAACA
TAGCTCCGAGAAGAGCAAATGTCAAGAACATTTTGATGTTTACAAGGAATGCAAGAAGAAAGAGGAATCTGTAAACATTGATCCTCCATTTGATCTAAATAGTGCAGGCT
ACAATCACGATTAA
mRNA sequenceShow/hide mRNA sequence
GGGTCCTCTCGATACAATTACGTATAAAAGGAGATTGATTCTCTTGCTTTCTCATCGGAATTTCAGGCAGCCATTTTAACCGACCTCTATTTTTCCACCGAGACAGAGTG
AGCTTTTCCGCCATGGCTTCCACTTCTAGGGATCCGGCTCCGCCGTACGCCAGTGCTGCTAGAATTTCCGATTCTCCTTGTTATCCTCAGTACAGCGCTTCCCTGAAATG
TCTTGAAGAACATAGCTCCGAGAAGAGCAAATGTCAAGAACATTTTGATGTTTACAAGGAATGCAAGAAGAAAGAGGAATCTGTAAACATTGATCCTCCATTTGATCTAA
ATAGTGCAGGCTACAATCACGATTAACCCGTTAGGCGGTCAAGAATTTACGACAGCAGTTGAGGCTATTGATTATATTAGAAGTTTATAGTGAAGATGAATTATAATTCA
AACCACCCATTTTCTGCTCAATGATGATCGTATGCCTTGAACTTATGTTCACATTTGGTTTATTCTATGAAATGTCTACC
Protein sequenceShow/hide protein sequence
MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEESVNIDPPFDLNSAGYNHD