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Lsi05G018780 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G018780
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:25973978..25976770
RNA-Seq ExpressionLsi05G018780
SyntenyLsi05G018780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018889.1 hypothetical protein SDJN02_20762, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-5566.29Show/hide
Query:  MDISKINKYSSTDQNSCDSDGRISSGPFCAKFPKSFSKLRCSIQNASLANQVSDISTFVETSFDLNAQNFTWKNNCDGFDESLVQAWRWKRSLELVFMAD
        + ISKINKYSS DQNS +SDGRISSGPF AKFPKSFSKLR S QN+++ANQ                       +CDG DES++QA R +RSL+LVFMAD
Subjt:  MDISKINKYSSTDQNSCDSDGRISSGPFCAKFPKSFSKLRCSIQNASLANQVSDISTFVETSFDLNAQNFTWKNNCDGFDESLVQAWRWKRSLELVFMAD

Query:  LGKIFFILHFHGGVRGGISVPAILGDDGVVTYQNEGAGQDTNDGDDKWREISARISIAAIAKRWRWWKDDVTPLR
        LGKIFFI+HFH  V G  SVPAI GDDGVV Y NEGA QD+NDGDD+ REIS  I+IAAIAKRWRWWKDDV PLR
Subjt:  LGKIFFILHFHGGVRGGISVPAILGDDGVVTYQNEGAGQDTNDGDDKWREISARISIAAIAKRWRWWKDDVTPLR
KAG7028734.1 hypothetical protein SDJN02_09915, partial [Cucurbita argyrosperma subsp. argyrosperma]8.0e-0678.95Show/hide
Query:  QNSCDSDGRISSGPFCAKFPKSFSKLRCSIQNASLANQ
        QNS D+DGRI SGPF AKFP+SFSKLRC  Q+ASLANQ
Subjt:  QNSCDSDGRISSGPFCAKFPKSFSKLRCSIQNASLANQ
TrEMBL top hitse value%identityAlignment
A0A0A9EUU7 Uncharacterized protein6.2e-0449.21Show/hide
Query:  AILGDDGVVTYQNEGAGQDTNDGDDKWREISARISIAA----IAKRWRWWKDDVTPLRAIYAA
        A+LGDDGVV  + EGAG+  +DGDD+ RE  A   +AA    +  R R  +D+V PLRA+ AA
Subjt:  AILGDDGVVTYQNEGAGQDTNDGDDKWREISARISIAA----IAKRWRWWKDDVTPLRAIYAA
A0A453PB00 Uncharacterized protein8.6e-0645.83Show/hide
Query:  GISVPAILGDDGVVTYQNEGAGQDTNDGDDKWREISA----RISIAA----IAKRWRWWKDDVTPLRAIYAA
        G    A+LGDDGVV  + EGAG+  +DGDD+ RE  A     +++AA    +  R R W+D+V PLRA++AA
Subjt:  GISVPAILGDDGVVTYQNEGAGQDTNDGDDKWREISA----RISIAA----IAKRWRWWKDDVTPLRAIYAA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATCTCAAAAATCAATAAATATTCAAGCACGGACCAGAATTCTTGTGACAGCGATGGAAGGATATCTAGTGGTCCATTTTGTGCAAAATTCCCAAAATCTTTTTC
AAAGTTGAGATGTAGCATTCAGAATGCCAGTTTAGCCAATCAAGTATCTGACATCAGTACTTTTGTTGAGACAAGTTTTGATTTAAATGCTCAAAACTTCACATGGAAGA
ATAACTGTGATGGATTTGATGAGAGCCTCGTCCAAGCCTGGAGGTGGAAGAGGAGCTTGGAGCTGGTTTTCATGGCGGATTTGGGAAAGATTTTCTTCATCCTCCATTTC
CATGGCGGCGTTAGAGGTGGAATTTCTGTTCCTGCAATACTTGGAGATGATGGTGTAGTAACTTACCAAAATGAAGGCGCTGGCCAAGATACCAATGATGGCGATGATAA
GTGGAGAGAAATCAGTGCCAGAATCTCCATTGCTGCCATAGCCAAAAGGTGGAGGTGGTGGAAAGATGATGTAACACCATTGAGGGCAATATATGCTGCAAATCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATATCTCAAAAATCAATAAATATTCAAGCACGGACCAGAATTCTTGTGACAGCGATGGAAGGATATCTAGTGGTCCATTTTGTGCAAAATTCCCAAAATCTTTTTC
AAAGTTGAGATGTAGCATTCAGAATGCCAGTTTAGCCAATCAAGTATCTGACATCAGTACTTTTGTTGAGACAAGTTTTGATTTAAATGCTCAAAACTTCACATGGAAGA
ATAACTGTGATGGATTTGATGAGAGCCTCGTCCAAGCCTGGAGGTGGAAGAGGAGCTTGGAGCTGGTTTTCATGGCGGATTTGGGAAAGATTTTCTTCATCCTCCATTTC
CATGGCGGCGTTAGAGGTGGAATTTCTGTTCCTGCAATACTTGGAGATGATGGTGTAGTAACTTACCAAAATGAAGGCGCTGGCCAAGATACCAATGATGGCGATGATAA
GTGGAGAGAAATCAGTGCCAGAATCTCCATTGCTGCCATAGCCAAAAGGTGGAGGTGGTGGAAAGATGATGTAACACCATTGAGGGCAATATATGCTGCAAATCTCTAAA
GAACAATCTTTGTAAGCATATGGCTGCCATTGATTTGAGTTTCCTACAGAACCCATTTTCCTCTGCCACTTGTGGATCTTGCAGGTACCCCTATTTTCTCTTTTTTCATG
TGTTTATGTGGTAGAGAGAGAGAGAGAGAGAGAGAGTTTGATTGAAGATGGAGGGCAGAAGAAAAAGAAAGCAAAATTGAGGACTTGGATGCAAAGGGAAGGAAAGTGGG
AGGAGGTAGGAAATTGTTATACCACTTATCCTCTCTCTCTTTCTCTACTTTTTCTTTTTTCTTAATTCTTGTCCTTTCCTTTTACTTTTCCCTTTTCAACTCCTTCTCCT
TCAGAAACATGTCTTCAACAAAGAAATGGTGTCAATATTAGGCTTGTCTAAATTCCTTGTGTGAGACTTTAGGTTTTGATTTCAAGTTTTCCATTGACAAATGGAAGAAG
ATGAGTGTGGGTGTGGGTTTGATAAAAACCTAAGTGAACTCTAAGAAAGAAAAGTTGGTGAATTTAGGTAAGACAATCCCTTCGAACCATAATTTTCTTTTCCCATCAAT
TTATGCTATTTG
Protein sequenceShow/hide protein sequence
MDISKINKYSSTDQNSCDSDGRISSGPFCAKFPKSFSKLRCSIQNASLANQVSDISTFVETSFDLNAQNFTWKNNCDGFDESLVQAWRWKRSLELVFMADLGKIFFILHF
HGGVRGGISVPAILGDDGVVTYQNEGAGQDTNDGDDKWREISARISIAAIAKRWRWWKDDVTPLRAIYAANL