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Lsi05G018910 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G018910
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionchloroplast chaperonin 10
Genome locationchr05:26080420..26082779
RNA-Seq ExpressionLsi05G018910
SyntenyLsi05G018910
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_021659179.1 10 kDa chaperonin 1, chloroplastic-like isoform X1 [Hevea brasiliensis]5.1e-0457.45Show/hide
Query:  KKIIFNSLANCLRISSISLNTSILTVDLGTEAKHCFCKAGDLLAVVE
        KK++F+ + N   +SS++      TVDLGTE +HCFCKAGDLLAVVE
Subjt:  KKIIFNSLANCLRISSISLNTSILTVDLGTEAKHCFCKAGDLLAVVE
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G44650.1 chloroplast chaperonin 101.4e-0464.29Show/hide
Query:  NTSILTVDLGTEAKHCFCKAGDLLAVVE
        + S   VDLGT+A+HCFCK  DLLA+VE
Subjt:  NTSILTVDLGTEAKHCFCKAGDLLAVVE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTATGAGAATTATTGGTTACCACAACTGTGCTGCAATCTTGATTGCAGGTGGATATCTTTTACCGAACAACCTTAAGAAAATAATTTTTAATTCTTTGGCTAATTG
TTTGAGGATATCAAGTATTTCACTGAATACTTCCATTCTTACTGTGGATTTGGGCACAGAAGCTAAGCACTGCTTCTGTAAAGCTGGTGATTTGTTAGCTGTGGTTGAGT
AG
mRNA sequenceShow/hide mRNA sequence
ATGCCTATGAGAATTATTGGTTACCACAACTGTGCTGCAATCTTGATTGCAGGTGGATATCTTTTACCGAACAACCTTAAGAAAATAATTTTTAATTCTTTGGCTAATTG
TTTGAGGATATCAAGTATTTCACTGAATACTTCCATTCTTACTGTGGATTTGGGCACAGAAGCTAAGCACTGCTTCTGTAAAGCTGGTGATTTGTTAGCTGTGGTTGAGT
AGAGAAGCTTCCTCCAACACTTCAATGTCCACATCAGTTGTTTTCACTCAGATTAGTTCTCTTTCCCGATTGTCATTTGCTTGTTGCTTCTGCAATATCTGATTTTCATT
TTTGCTTTTATTGATCTGTGTGACCTGTATAAAGATGTTAGTTATTATCGTTAGGAAGAATACCATAAATTATTTTTAAAAAATTACTTAACCTTACCAAAAAAAAAAAA
AAATCAAATCAAATAGTTATGCAACTATTTTTTTTTTCTTTCCCCTCCTAGAGAATATTAAACCTTTTTTAAATATAAACTTTCAAACTGTCTATAGAGGATGTTTAGTT
TCTAGGTTGAGTTTGTGTAGTCTTGGATTATGAAGTTGAGTCTGCTATTTGATTTATGGATGGTTTGCTAATCTCATAGCTATATAAATTTAAGTGGTTAAAATTCACCA
CTTAAGTAACATGACTCAATAAACCTTATTTCTTGATGTGGGTTCTTTAATTTCAATTTCTAGGGGATCATGTTCTATTGA
Protein sequenceShow/hide protein sequence
MPMRIIGYHNCAAILIAGGYLLPNNLKKIIFNSLANCLRISSISLNTSILTVDLGTEAKHCFCKAGDLLAVVE