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Lsi05G019130 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G019130
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:26340889..26341170
RNA-Seq ExpressionLsi05G019130
SyntenyLsi05G019130
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049081.1 hypothetical protein E6C27_scaffold171G003100 [Cucumis melo var. makuwa]2.2e-3186.52Show/hide
Query:  MDITVPGRNAAEEVTRESLIAISYEEPETALSSKRSSGKLSSENHNLVNGIDHNLVEGKEYDGDEKYRSELIAISFLESPPEIGSVPVA
        MDITVPGRNA EEVTRESLI+ISYEEPET LSSKR S KLSSEN NL NGI+HN VEGKEYDGDEK+RSELIAISFLES PE GSVPVA
Subjt:  MDITVPGRNAAEEVTRESLIAISYEEPETALSSKRSSGKLSSENHNLVNGIDHNLVEGKEYDGDEKYRSELIAISFLESPPEIGSVPVA

KAG6582528.1 hypothetical protein SDJN03_22530, partial [Cucurbita argyrosperma subsp. sororia]4.3e-3289.13Show/hide
Query:  MDITVPGRNAAEEVTRESLIAISYEEPETALSSKRSSGKLSSENHNLVNGIDHNLVEGKEYDGDEKYRSELIAISFLESPPEIGSVPVAELK
        MDITVPG N  EEVTRESLIAISYEEPET LSSKRSSGKLSSEN NLVNGIDHNLVEGKEYD  EKYRSELIAISFLESPPEIGS  V ELK
Subjt:  MDITVPGRNAAEEVTRESLIAISYEEPETALSSKRSSGKLSSENHNLVNGIDHNLVEGKEYDGDEKYRSELIAISFLESPPEIGSVPVAELK

KAG7018913.1 hypothetical protein SDJN02_20787, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-3289.13Show/hide
Query:  MDITVPGRNAAEEVTRESLIAISYEEPETALSSKRSSGKLSSENHNLVNGIDHNLVEGKEYDGDEKYRSELIAISFLESPPEIGSVPVAELK
        MDITVPG N  EEVTRESLIAISYEEPET LSSKRSSGKLSSEN NLVNGIDHNLVEGKEYD  EKYRSELIAISFLESPPEIGS  V ELK
Subjt:  MDITVPGRNAAEEVTRESLIAISYEEPETALSSKRSSGKLSSENHNLVNGIDHNLVEGKEYDGDEKYRSELIAISFLESPPEIGSVPVAELK

KGN56651.1 hypothetical protein Csa_009703 [Cucumis sativus]4.8e-3180.65Show/hide
Query:  MDITVPGRNAAEEVTRESLIAISYEEPETALSSKRSSGKLSSENHNLVNGIDHNLVEGKEYDGDEKYRSELIAISFLESPPEIGSVPVAELKG
        MD TVPGRNA EEVTRESLI+ISYEEPET LSS + S K+S EN NL NGI+HN +EGKEYDGDEK+RSELIAISFLES PE GSVPVAELKG
Subjt:  MDITVPGRNAAEEVTRESLIAISYEEPETALSSKRSSGKLSSENHNLVNGIDHNLVEGKEYDGDEKYRSELIAISFLESPPEIGSVPVAELKG

XP_022974968.1 uncharacterized protein LOC111473815 [Cucurbita maxima]8.5e-2877.42Show/hide
Query:  MDITVPGRNAAEEVTRESLIAISYEEPETALSSKRSSGKLSSENHNLVNGIDHNLVEGKEYDGDEKYRSELIAISFLESPPEIGSVPVAELKG
        MDITVPG+N +EEVTRESLIAISY EPE+ALSSKR SGKL+S+N         NLVEGKE+D DEKYRSELIAISFLESPPEIGSVPV +LKG
Subjt:  MDITVPGRNAAEEVTRESLIAISYEEPETALSSKRSSGKLSSENHNLVNGIDHNLVEGKEYDGDEKYRSELIAISFLESPPEIGSVPVAELKG

TrEMBL top hitse value%identityAlignment
A0A0A0L967 Uncharacterized protein2.3e-3180.65Show/hide
Query:  MDITVPGRNAAEEVTRESLIAISYEEPETALSSKRSSGKLSSENHNLVNGIDHNLVEGKEYDGDEKYRSELIAISFLESPPEIGSVPVAELKG
        MD TVPGRNA EEVTRESLI+ISYEEPET LSS + S K+S EN NL NGI+HN +EGKEYDGDEK+RSELIAISFLES PE GSVPVAELKG
Subjt:  MDITVPGRNAAEEVTRESLIAISYEEPETALSSKRSSGKLSSENHNLVNGIDHNLVEGKEYDGDEKYRSELIAISFLESPPEIGSVPVAELKG

A0A5A7U641 Uncharacterized protein1.0e-3186.52Show/hide
Query:  MDITVPGRNAAEEVTRESLIAISYEEPETALSSKRSSGKLSSENHNLVNGIDHNLVEGKEYDGDEKYRSELIAISFLESPPEIGSVPVA
        MDITVPGRNA EEVTRESLI+ISYEEPET LSSKR S KLSSEN NL NGI+HN VEGKEYDGDEK+RSELIAISFLES PE GSVPVA
Subjt:  MDITVPGRNAAEEVTRESLIAISYEEPETALSSKRSSGKLSSENHNLVNGIDHNLVEGKEYDGDEKYRSELIAISFLESPPEIGSVPVA

A0A6J1HHB9 uncharacterized protein LOC1114632639.1e-2876.34Show/hide
Query:  MDITVPGRNAAEEVTRESLIAISYEEPETALSSKRSSGKLSSENHNLVNGIDHNLVEGKEYDGDEKYRSELIAISFLESPPEIGSVPVAELKG
        MDITVPG+N +EEVTRESLIAISY EPE+ALSSKR SGKL+S+N         NLVEGKE+D DEKYRSELI+ISFLESPPEIGSVPV +LKG
Subjt:  MDITVPGRNAAEEVTRESLIAISYEEPETALSSKRSSGKLSSENHNLVNGIDHNLVEGKEYDGDEKYRSELIAISFLESPPEIGSVPVAELKG

A0A6J1IHW2 uncharacterized protein LOC1114738154.1e-2877.42Show/hide
Query:  MDITVPGRNAAEEVTRESLIAISYEEPETALSSKRSSGKLSSENHNLVNGIDHNLVEGKEYDGDEKYRSELIAISFLESPPEIGSVPVAELKG
        MDITVPG+N +EEVTRESLIAISY EPE+ALSSKR SGKL+S+N         NLVEGKE+D DEKYRSELIAISFLESPPEIGSVPV +LKG
Subjt:  MDITVPGRNAAEEVTRESLIAISYEEPETALSSKRSSGKLSSENHNLVNGIDHNLVEGKEYDGDEKYRSELIAISFLESPPEIGSVPVAELKG

A0A7N2LFG9 Uncharacterized protein3.2e-1253.93Show/hide
Query:  MDITVPGRNAAEEVTRESLIAISYEEPETALSSKRSSGKLSSENHNLVNGIDHNLVEGKEYDGDEKYRSELIAISFLESPPEIGSVPVA
        MD TVPG+   +EVTRESLI+ISY EP+   ++K SS KL+SENH  +  +D N        GDEKYRSELI+IS+ +S PE G +PV+
Subjt:  MDITVPGRNAAEEVTRESLIAISYEEPETALSSKRSSGKLSSENHNLVNGIDHNLVEGKEYDGDEKYRSELIAISFLESPPEIGSVPVA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATAACAGTACCTGGAAGGAATGCTGCTGAGGAAGTGACTCGTGAGTCGCTTATTGCCATCTCTTACGAGGAACCAGAAACAGCTCTCTCTTCAAAGCGATCATC
TGGAAAGCTTAGTAGTGAAAACCACAATCTGGTCAACGGGATAGACCACAATCTGGTGGAAGGGAAAGAATATGATGGAGATGAGAAATATAGATCTGAGCTGATTGCTA
TTTCCTTCCTTGAGTCACCACCTGAAATTGGAAGTGTACCCGTGGCCGAACTCAAGGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATATAACAGTACCTGGAAGGAATGCTGCTGAGGAAGTGACTCGTGAGTCGCTTATTGCCATCTCTTACGAGGAACCAGAAACAGCTCTCTCTTCAAAGCGATCATC
TGGAAAGCTTAGTAGTGAAAACCACAATCTGGTCAACGGGATAGACCACAATCTGGTGGAAGGGAAAGAATATGATGGAGATGAGAAATATAGATCTGAGCTGATTGCTA
TTTCCTTCCTTGAGTCACCACCTGAAATTGGAAGTGTACCCGTGGCCGAACTCAAGGGTTAG
Protein sequenceShow/hide protein sequence
MDITVPGRNAAEEVTRESLIAISYEEPETALSSKRSSGKLSSENHNLVNGIDHNLVEGKEYDGDEKYRSELIAISFLESPPEIGSVPVAELKG