; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G019720 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G019720
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein LITTLE ZIPPER 1-like
Genome locationchr05:26841726..26842799
RNA-Seq ExpressionLsi05G019720
SyntenyLsi05G019720
Gene Ontology termsNA
InterPro domainsIPR039312 - Protein LITTLE ZIPPER


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN56585.1 hypothetical protein Csa_011002 [Cucumis sativus]1.7e-4082.61Show/hide
Query:  MCHSSPLILTPSYLACR-HRRRPIRVHRLLRRMRFAKEE-----VEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSI
        MCHSSP ILTPSYLACR  RRRP+RV+ LLRRMRFAKEE     V+ EMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFS++KPP S 
Subjt:  MCHSSPLILTPSYLACR-HRRRPIRVHRLLRRMRFAKEE-----VEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSI

Query:  SDLSSCGWEIKQNHL
        SDLS+C WE KQNHL
Subjt:  SDLSSCGWEIKQNHL

XP_022924351.1 protein LITTLE ZIPPER 1-like [Cucurbita moschata]5.8e-2877.88Show/hide
Query:  MCHSSPLILTPSYLACRHRRRPIRVHRLLRRMRFAKEE-----VEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSIS
        MC SS L LT S+L  RHRRRPIRV+RLLRRMRF KEE     V+ EMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFS  K PQ  S
Subjt:  MCHSSPLILTPSYLACRHRRRPIRVHRLLRRMRFAKEE-----VEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSIS

Query:  DLSS
        +LS+
Subjt:  DLSS

XP_022980450.1 protein LITTLE ZIPPER 1-like [Cucurbita maxima]9.9e-2877.88Show/hide
Query:  MCHSSPLILTPSYLACRHRRRPIRVHRLLRRMRFAKEE-----VEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSIS
        MC SS L LT S+L  RHRRRPIRV+RLLRRMRF KEE     V+ EMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFS  K PQ  S
Subjt:  MCHSSPLILTPSYLACRHRRRPIRVHRLLRRMRFAKEE-----VEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSIS

Query:  DLSS
        +LS+
Subjt:  DLSS

XP_023527865.1 protein LITTLE ZIPPER 1-like isoform X2 [Cucurbita pepo subsp. pepo]9.9e-2877.88Show/hide
Query:  MCHSSPLILTPSYLACRHRRRPIRVHRLLRRMRFAKEE-----VEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSIS
        MC SS L LT S+L  RHRRRPIRV+RLLRRMRF KEE     V+ EMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFS  KP  S S
Subjt:  MCHSSPLILTPSYLACRHRRRPIRVHRLLRRMRFAKEE-----VEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSIS

Query:  DLSS
        +LS+
Subjt:  DLSS

XP_038901104.1 protein LITTLE ZIPPER 1-like [Benincasa hispida]7.6e-4488.99Show/hide
Query:  MCHSSPLILTPSYLACRHRRRPIRVHRLLRRMRFAKEEVEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSISDLSSC
        MC SS LILTPSYLACRHRRRP+RV+RLLRRM+FAKEEVE+EMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLS+LQNFSNHKP Q  SDLS C
Subjt:  MCHSSPLILTPSYLACRHRRRPIRVHRLLRRMRFAKEEVEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSISDLSSC

Query:  GWEIKQNHL
        G EIKQNHL
Subjt:  GWEIKQNHL

TrEMBL top hitse value%identityAlignment
A0A0A0L3S0 Uncharacterized protein8.4e-4182.61Show/hide
Query:  MCHSSPLILTPSYLACR-HRRRPIRVHRLLRRMRFAKEE-----VEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSI
        MCHSSP ILTPSYLACR  RRRP+RV+ LLRRMRFAKEE     V+ EMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFS++KPP S 
Subjt:  MCHSSPLILTPSYLACR-HRRRPIRVHRLLRRMRFAKEE-----VEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSI

Query:  SDLSSCGWEIKQNHL
        SDLS+C WE KQNHL
Subjt:  SDLSSCGWEIKQNHL

A0A5D3D1P7 Protein LITTLE ZIPPER 3-like5.9e-2681.93Show/hide
Query:  MRFAKEE-----VEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSISDLSSCGWEIKQNHL
        MRF  EE     V+ EMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFS++KPPQS SDLS+C WE KQNHL
Subjt:  MRFAKEE-----VEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSISDLSSCGWEIKQNHL

A0A6J1E9A8 protein LITTLE ZIPPER 1-like2.8e-2877.88Show/hide
Query:  MCHSSPLILTPSYLACRHRRRPIRVHRLLRRMRFAKEE-----VEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSIS
        MC SS L LT S+L  RHRRRPIRV+RLLRRMRF KEE     V+ EMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFS  K PQ  S
Subjt:  MCHSSPLILTPSYLACRHRRRPIRVHRLLRRMRFAKEE-----VEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSIS

Query:  DLSS
        +LS+
Subjt:  DLSS

A0A6J1IF90 protein LITTLE ZIPPER 3-like1.9e-2472.82Show/hide
Query:  MCHSSPLIL---TPSYLACRHRRRPIRVHRLLRRMRFAKEE--VEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSIS
        MC SS  +L   T S L CRHRRRPIR++RL RRM+FAK+   V++EMEI+NLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ FS  K  Q  S
Subjt:  MCHSSPLIL---TPSYLACRHRRRPIRVHRLLRRMRFAKEE--VEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSIS

Query:  DLS
        DLS
Subjt:  DLS

A0A6J1IWC5 protein LITTLE ZIPPER 1-like4.8e-2877.88Show/hide
Query:  MCHSSPLILTPSYLACRHRRRPIRVHRLLRRMRFAKEE-----VEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSIS
        MC SS L LT S+L  RHRRRPIRV+RLLRRMRF KEE     V+ EMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFS  K PQ  S
Subjt:  MCHSSPLILTPSYLACRHRRRPIRVHRLLRRMRFAKEE-----VEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSIS

Query:  DLSS
        +LS+
Subjt:  DLSS

SwissProt top hitse value%identityAlignment
F4IG60 Protein LITTLE ZIPPER 11.3e-0960.66Show/hide
Query:  IRVHRLLRRMRFAKEEVEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ
        +R+ RL RR R  +E  EK+ME+ NLKLY+ENQ+II ENE+L+KKA LLH+EN+ L S LQ
Subjt:  IRVHRLLRRMRFAKEEVEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ

Q56WL5 Protein LITTLE ZIPPER 47.9e-0460.98Show/hide
Query:  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ
        ME  N KLY++N  II+ENERLRKKA +L++ENQ LL +L+
Subjt:  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ

Q9LXI8 Protein LITTLE ZIPPER 37.9e-0463.41Show/hide
Query:  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ
        ME  N KL++EN  I++ENERLRKKA LL++ENQ LL QL+
Subjt:  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ

Q9LZX5 Protein LITTLE ZIPPER 21.8e-0858.33Show/hide
Query:  IRVHRLLRRMRFAKEEVEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL
        +R+  L RR R  KE  +KEME++NLKL++ENQSII ENE L+KKA LLH EN  L + L
Subjt:  IRVHRLLRRMRFAKEEVEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL

Arabidopsis top hitse value%identityAlignment
AT2G45450.1 protein binding9.0e-1160.66Show/hide
Query:  IRVHRLLRRMRFAKEEVEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ
        +R+ RL RR R  +E  EK+ME+ NLKLY+ENQ+II ENE+L+KKA LLH+EN+ L S LQ
Subjt:  IRVHRLLRRMRFAKEEVEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ

AT3G52770.1 protein binding5.6e-0563.41Show/hide
Query:  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ
        ME  N KL++EN  I++ENERLRKKA LL++ENQ LL QL+
Subjt:  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ

AT3G60890.1 protein binding1.3e-0958.33Show/hide
Query:  IRVHRLLRRMRFAKEEVEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL
        +R+  L RR R  KE  +KEME++NLKL++ENQSII ENE L+KKA LLH EN  L + L
Subjt:  IRVHRLLRRMRFAKEEVEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL

AT3G60890.2 protein binding1.1e-0862.26Show/hide
Query:  RRMRFAKEEVEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL
        RR R  KE  +KEME++NLKL++ENQSII ENE L+KKA LLH EN  L + L
Subjt:  RRMRFAKEEVEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCCATTCTTCCCCATTGATCCTCACTCCTTCCTATTTAGCTTGTCGCCATCGCCGCCGCCCTATTCGAGTTCACAGGCTCTTGAGGAGGATGAGATTCGCAAAGGA
AGAGGTTGAGAAAGAAATGGAGATAAAGAATTTGAAACTGTACATGGAGAATCAAAGCATTATTGAAGAGAATGAGAGATTGAGAAAGAAAGCGTTTCTTCTTCATAAAG
AGAATCAGGTTTTGTTATCTCAACTCCAGAATTTCTCCAACCATAAACCACCGCAGTCTATCTCCGATTTGAGTTCCTGCGGCTGGGAAATTAAACAAAATCATCTGTAA
mRNA sequenceShow/hide mRNA sequence
TGTGAATTTGTGATCGTCTTCTAATTCTGCATTGTTCGTCATCTACTTGCTGCCCCTTTGCCATCATGAGTCCTACTCTCATCATTGCTATGGAAACCCTCTCTTTCTCT
CTCTTCTTCTCTTCCTTTTTTTTCTTCTTCCTCAATTTCCTCTTCTATTTATACTCTCAATCCCCTTCCTCCGCCATTGCTAACCATTTCTCCACCTTCACACCATCTCA
AAAATGTGCCATTCTTCCCCATTGATCCTCACTCCTTCCTATTTAGCTTGTCGCCATCGCCGCCGCCCTATTCGAGTTCACAGGCTCTTGAGGAGGATGAGATTCGCAAA
GGAAGAGGTTGAGAAAGAAATGGAGATAAAGAATTTGAAACTGTACATGGAGAATCAAAGCATTATTGAAGAGAATGAGAGATTGAGAAAGAAAGCGTTTCTTCTTCATA
AAGAGAATCAGGTTTTGTTATCTCAACTCCAGAATTTCTCCAACCATAAACCACCGCAGTCTATCTCCGATTTGAGTTCCTGCGGCTGGGAAATTAAACAAAATCATCTG
TAACCAATGAATCAAGTAGAGGATCTCTCAACCTTTGATAATTTTCTTGCTACTGATTTCTTCTTCTTTTTCTTTTTTCTTTTTTTTCCTACGATTCCTTGGGTTTGTAA
TCTGTTATTTTGACAATAAATTAGGTTTTTGATTTTGAGGGGAAGGGAATAAAGGGTAAAATTCGGTTATTAGGAATTTAGGGGATAGATTTTTAGAATATAGTTAGTTC
TGTGATGAAATATCATGAAGCAAAACTCTGTAGTCTGTATTGTTAAATTCGATCTATCTAAATTCTCCATTGATGAACCTTTCTTTATGTCATCAAACTCCATTGAAGAA
GCTTGGTTGGTTTGATCTTGAAGTAAGATAATGATTTGGTTTTTTGGCCTAAAACTTCAATCAAATCGGTGAAATACGATTTCGGCTGCATGGTTGTATCAATTTAAATC
CGAA
Protein sequenceShow/hide protein sequence
MCHSSPLILTPSYLACRHRRRPIRVHRLLRRMRFAKEEVEKEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSNHKPPQSISDLSSCGWEIKQNHL