; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G019760 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G019760
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGrowth-regulating factor
Genome locationchr05:26879935..26880477
RNA-Seq ExpressionLsi05G019760
SyntenyLsi05G019760
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0099402 - plant organ development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR014978 - Glutamine-Leucine-Glutamine, QLQ
IPR031137 - Growth-regulating factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049020.1 growth-regulating factor 9 [Cucumis melo var. makuwa]3.8e-5386.92Show/hide
Query:  MESFPSSETGRGLRPRKADEAATAVMMMEVKKEINRPENDKVSTPVLPSINLGLQIGTNSAASRNERTSIVRRSVESILTAGQLQELEQQVLIHKYLAAG
        ++SFPSSETGRGLR RKADE AT V+MME KKE+N+ END+VSTPVLPSINLGLQIGTNSA SRNER SIV RS ESILTAGQLQELEQQV+IHKYLAAG
Subjt:  MESFPSSETGRGLRPRKADEAATAVMMMEVKKEINRPENDKVSTPVLPSINLGLQIGTNSAASRNERTSIVRRSVESILTAGQLQELEQQVLIHKYLAAG

Query:  LRVPTHLLVPIWKSAARTLGSNVNGIYERH
        LRVPTHLLVPIWKSAARTLGSNVNGIYER+
Subjt:  LRVPTHLLVPIWKSAARTLGSNVNGIYERH

XP_004133902.1 growth-regulating factor 9 [Cucumis sativus]2.3e-5387.79Show/hide
Query:  MESFPSSETGRG-LRPRKADEAATAVMMMEVKKEINRPENDKVSTPVLPSINLGLQIGTNSAASRNERTSIVRRSVESILTAGQLQELEQQVLIHKYLAA
        ++SFPSSETGRG LR RKADE ATAVMMMEVKKE+N+ END+VSTPVLPSINLGLQIGTNSA SRNER SIVRRS ESILTAGQLQELEQQVLIHKYLAA
Subjt:  MESFPSSETGRG-LRPRKADEAATAVMMMEVKKEINRPENDKVSTPVLPSINLGLQIGTNSAASRNERTSIVRRSVESILTAGQLQELEQQVLIHKYLAA

Query:  GLRVPTHLLVPIWKSAARTLGSNVNGIYERH
        G+RVPTHLLVPIWKSAARTLGSN+NGIYE +
Subjt:  GLRVPTHLLVPIWKSAARTLGSNVNGIYERH

XP_008438132.1 PREDICTED: growth-regulating factor 9 [Cucumis melo]1.3e-5387.69Show/hide
Query:  MESFPSSETGRGLRPRKADEAATAVMMMEVKKEINRPENDKVSTPVLPSINLGLQIGTNSAASRNERTSIVRRSVESILTAGQLQELEQQVLIHKYLAAG
        ++SFPSSETGRGLR RKADE AT V+MMEVKKE+N+ END+VSTPVLPSINLGLQIGTNSA SRNER SIV RS ESILTAGQLQELEQQV+IHKYLAAG
Subjt:  MESFPSSETGRGLRPRKADEAATAVMMMEVKKEINRPENDKVSTPVLPSINLGLQIGTNSAASRNERTSIVRRSVESILTAGQLQELEQQVLIHKYLAAG

Query:  LRVPTHLLVPIWKSAARTLGSNVNGIYERH
        LRVPTHLLVPIWKSAARTLGSNVNGIYER+
Subjt:  LRVPTHLLVPIWKSAARTLGSNVNGIYERH

XP_023529192.1 growth-regulating factor 9 [Cucurbita pepo subsp. pepo]2.9e-4883.33Show/hide
Query:  MESFPSSETGRGLRPRKADEAATAVMMMEVKKEINRPENDKVSTPVLPSINLGLQIGTNSAASRNERTSIVRRSVESILTAGQLQELEQQVLIHKYLAAG
        ++SFPSSETGRGLR RK DEAATA MMM+VKKE N+ END++S PV PSINLGLQIGTNSA SRNERTSIV RS ES++T GQLQELEQQVLIHKYLAAG
Subjt:  MESFPSSETGRGLRPRKADEAATAVMMMEVKKEINRPENDKVSTPVLPSINLGLQIGTNSAASRNERTSIVRRSVESILTAGQLQELEQQVLIHKYLAAG

Query:  LRVPTHLLVPIWKSAARTLGSNVNGI
        LRVPTHLLVPIWKS ARTLGSNVN I
Subjt:  LRVPTHLLVPIWKSAARTLGSNVNGI

XP_038902296.1 growth-regulating factor 9 [Benincasa hispida]4.5e-5486.92Show/hide
Query:  MESFPSSETGRGLRPRKADEAATAVMMMEVKKEINRPENDKVSTPVLPSINLGLQIGTNSAASRNERTSIVRRSVESILTAGQLQELEQQVLIHKYLAAG
        ++SFPSSETGRGLRPRKA+EAATAVMMMEVKKE+NRPE+D++STPVLPSINLGLQIGTNSA SRNERTSI RRS E ILTAGQLQELEQQVLI+KYLAAG
Subjt:  MESFPSSETGRGLRPRKADEAATAVMMMEVKKEINRPENDKVSTPVLPSINLGLQIGTNSAASRNERTSIVRRSVESILTAGQLQELEQQVLIHKYLAAG

Query:  LRVPTHLLVPIWKSAARTLGSNVNGIYERH
        LRVPTHLLVPIWKSAAR L SNV+G+YER+
Subjt:  LRVPTHLLVPIWKSAARTLGSNVNGIYERH

TrEMBL top hitse value%identityAlignment
A0A0A0L916 Growth-regulating factor1.1e-5387.79Show/hide
Query:  MESFPSSETGRG-LRPRKADEAATAVMMMEVKKEINRPENDKVSTPVLPSINLGLQIGTNSAASRNERTSIVRRSVESILTAGQLQELEQQVLIHKYLAA
        ++SFPSSETGRG LR RKADE ATAVMMMEVKKE+N+ END+VSTPVLPSINLGLQIGTNSA SRNER SIVRRS ESILTAGQLQELEQQVLIHKYLAA
Subjt:  MESFPSSETGRG-LRPRKADEAATAVMMMEVKKEINRPENDKVSTPVLPSINLGLQIGTNSAASRNERTSIVRRSVESILTAGQLQELEQQVLIHKYLAA

Query:  GLRVPTHLLVPIWKSAARTLGSNVNGIYERH
        G+RVPTHLLVPIWKSAARTLGSN+NGIYE +
Subjt:  GLRVPTHLLVPIWKSAARTLGSNVNGIYERH

A0A1S3AVM2 Growth-regulating factor6.4e-5487.69Show/hide
Query:  MESFPSSETGRGLRPRKADEAATAVMMMEVKKEINRPENDKVSTPVLPSINLGLQIGTNSAASRNERTSIVRRSVESILTAGQLQELEQQVLIHKYLAAG
        ++SFPSSETGRGLR RKADE AT V+MMEVKKE+N+ END+VSTPVLPSINLGLQIGTNSA SRNER SIV RS ESILTAGQLQELEQQV+IHKYLAAG
Subjt:  MESFPSSETGRGLRPRKADEAATAVMMMEVKKEINRPENDKVSTPVLPSINLGLQIGTNSAASRNERTSIVRRSVESILTAGQLQELEQQVLIHKYLAAG

Query:  LRVPTHLLVPIWKSAARTLGSNVNGIYERH
        LRVPTHLLVPIWKSAARTLGSNVNGIYER+
Subjt:  LRVPTHLLVPIWKSAARTLGSNVNGIYERH

A0A5D3D2K6 Growth-regulating factor1.9e-5386.92Show/hide
Query:  MESFPSSETGRGLRPRKADEAATAVMMMEVKKEINRPENDKVSTPVLPSINLGLQIGTNSAASRNERTSIVRRSVESILTAGQLQELEQQVLIHKYLAAG
        ++SFPSSETGRGLR RKADE AT V+MME KKE+N+ END+VSTPVLPSINLGLQIGTNSA SRNER SIV RS ESILTAGQLQELEQQV+IHKYLAAG
Subjt:  MESFPSSETGRGLRPRKADEAATAVMMMEVKKEINRPENDKVSTPVLPSINLGLQIGTNSAASRNERTSIVRRSVESILTAGQLQELEQQVLIHKYLAAG

Query:  LRVPTHLLVPIWKSAARTLGSNVNGIYERH
        LRVPTHLLVPIWKSAARTLGSNVNGIYER+
Subjt:  LRVPTHLLVPIWKSAARTLGSNVNGIYERH

A0A6J1EAI9 Growth-regulating factor2.6e-4781.75Show/hide
Query:  MESFPSSETGRGLRPRKADEAATAVMMMEVKKEINRPENDKVSTPVLPSINLGLQIGTNSAASRNERTSIVRRSVESILTAGQLQELEQQVLIHKYLAAG
        ++SFPSSETGRGLR RK DEA TA MMM+VKKE N+ END++S PV PSINLGLQIGTNSA SRNE TSIV RS ES++T GQLQELEQQVLIHKYLAAG
Subjt:  MESFPSSETGRGLRPRKADEAATAVMMMEVKKEINRPENDKVSTPVLPSINLGLQIGTNSAASRNERTSIVRRSVESILTAGQLQELEQQVLIHKYLAAG

Query:  LRVPTHLLVPIWKSAARTLGSNVNGI
        LRVPTHLLVPIWKS ARTLGSNVN I
Subjt:  LRVPTHLLVPIWKSAARTLGSNVNGI

A0A6J1IVU8 Growth-regulating factor1.4e-4883.33Show/hide
Query:  MESFPSSETGRGLRPRKADEAATAVMMMEVKKEINRPENDKVSTPVLPSINLGLQIGTNSAASRNERTSIVRRSVESILTAGQLQELEQQVLIHKYLAAG
        ++SFPSSETGRGLR RK DEAATA MMM+VKKE N+ END++S PV PSINLGLQIGTNSA SRNERTSIV RS ES++T GQLQELEQQVLIHKYLAAG
Subjt:  MESFPSSETGRGLRPRKADEAATAVMMMEVKKEINRPENDKVSTPVLPSINLGLQIGTNSAASRNERTSIVRRSVESILTAGQLQELEQQVLIHKYLAAG

Query:  LRVPTHLLVPIWKSAARTLGSNVNGI
        LRVPTHLLVPIWKS ARTLGSNVN I
Subjt:  LRVPTHLLVPIWKSAARTLGSNVNGI

SwissProt top hitse value%identityAlignment
A5HEG9 GRF-interacting factor 104.1e-0562.86Show/hide
Query:  TAGQLQELEQQVLIHKYLAAGLRVPTHLLVPIWKS
        TA QLQELEQQ  +++Y+AA + VPTHL+ P+WKS
Subjt:  TAGQLQELEQQVLIHKYLAAGLRVPTHLLVPIWKS

Q6AWX7 Growth-regulating factor 126.7e-0847.37Show/hide
Query:  TPVLPSINLGL-QIGTNSAASRNERTSIVRRSVE--SILTAGQLQELEQQVLIHKYLAAGLRVPTHLLVPIWKSAA
        +P++  + LGL   G++S+ S  E ++   R     S LT  Q QELEQQVLI++Y AAG  VP HL++PIWKS A
Subjt:  TPVLPSINLGL-QIGTNSAASRNERTSIVRRSVE--SILTAGQLQELEQQVLIHKYLAAGLRVPTHLLVPIWKSAA

Q6AWX8 Growth-regulating factor 116.9e-0546.55Show/hide
Query:  SAASRNERTSIVRR---SVESILTAGQLQELEQQVLIHKYLAAGLRVPTHLLVPIWKS
        +AA + E  ++V        +  TA QLQELEQQ  +++Y+AA + VPTHL+ PIWKS
Subjt:  SAASRNERTSIVRR---SVESILTAGQLQELEQQVLIHKYLAAGLRVPTHLLVPIWKS

Q6EPP9 Growth-regulating factor 102.3e-0847.76Show/hide
Query:  INLGLQIGTNSAASRNERTSIVRRSVESILTAGQLQELEQQVLIHKYLAAGLRVPTHLLVPIWKSAA
        + LGL +G +S   R+   S       + LT  Q QELE QVLI++Y AAG  VP HL++PIWKS A
Subjt:  INLGLQIGTNSAASRNERTSIVRRSVESILTAGQLQELEQQVLIHKYLAAGLRVPTHLLVPIWKSAA

Q8S9M3 Growth-regulating factor 91.6e-0652.17Show/hide
Query:  LTAGQLQELEQQVLIHKYLAAGLRVPTHLLVPIWKSAARTLGSNVN
        + A QL E   Q L+++Y+ AGLRVP HL+VPIW S A +  SN N
Subjt:  LTAGQLQELEQQVLIHKYLAAGLRVPTHLLVPIWKSAARTLGSNVN

Arabidopsis top hitse value%identityAlignment
AT2G45480.1 growth-regulating factor 91.2e-0752.17Show/hide
Query:  LTAGQLQELEQQVLIHKYLAAGLRVPTHLLVPIWKSAARTLGSNVN
        + A QL E   Q L+++Y+ AGLRVP HL+VPIW S A +  SN N
Subjt:  LTAGQLQELEQQVLIHKYLAAGLRVPTHLLVPIWKSAARTLGSNVN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGCTTTCCTTCTTCAGAAACTGGGAGAGGATTAAGGCCGCGGAAGGCCGATGAGGCGGCGACGGCCGTGATGATGATGGAGGTGAAAAAGGAGATTAATCGGCC
GGAAAATGACAAAGTGTCGACTCCGGTGTTGCCGTCGATTAATCTCGGTCTTCAGATTGGCACGAATTCGGCGGCAAGTCGAAACGAGAGAACCTCGATTGTTCGCCGGT
CGGTGGAATCGATTCTTACGGCTGGCCAATTGCAGGAGCTTGAGCAGCAAGTTCTTATTCACAAGTACCTGGCTGCTGGTCTCCGCGTTCCTACCCACCTTCTCGTTCCA
ATTTGGAAGAGTGCCGCCAGGACCTTGGGCTCTAATGTCAATGGTATCTACGAGCGCCACCACCGTAGCTGTAAGCGAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGCTTTCCTTCTTCAGAAACTGGGAGAGGATTAAGGCCGCGGAAGGCCGATGAGGCGGCGACGGCCGTGATGATGATGGAGGTGAAAAAGGAGATTAATCGGCC
GGAAAATGACAAAGTGTCGACTCCGGTGTTGCCGTCGATTAATCTCGGTCTTCAGATTGGCACGAATTCGGCGGCAAGTCGAAACGAGAGAACCTCGATTGTTCGCCGGT
CGGTGGAATCGATTCTTACGGCTGGCCAATTGCAGGAGCTTGAGCAGCAAGTTCTTATTCACAAGTACCTGGCTGCTGGTCTCCGCGTTCCTACCCACCTTCTCGTTCCA
ATTTGGAAGAGTGCCGCCAGGACCTTGGGCTCTAATGTCAATGGTATCTACGAGCGCCACCACCGTAGCTGTAAGCGAGTTTAA
Protein sequenceShow/hide protein sequence
MESFPSSETGRGLRPRKADEAATAVMMMEVKKEINRPENDKVSTPVLPSINLGLQIGTNSAASRNERTSIVRRSVESILTAGQLQELEQQVLIHKYLAAGLRVPTHLLVP
IWKSAARTLGSNVNGIYERHHRSCKRV