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Lsi05G019800 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G019800
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:26888887..26891409
RNA-Seq ExpressionLsi05G019800
SyntenyLsi05G019800
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAT11748.1 Os10g0525301 [Oryza sativa Japonica Group]7.2e-0535.06Show/hide
Query:  PGTDQLVHKSIDYFEVVPKRSFGTNVEKSFQFPERIDVAPENLSARIIEGLHEPAPCFDWFLHAIQIDAESNFENGV
        PGTD+LVH+ +D  + + +R  G +VE+  Q PER++VA + + A ++E L E AP     +  +++  E + E+G+
Subjt:  PGTDQLVHKSIDYFEVVPKRSFGTNVEKSFQFPERIDVAPENLSARIIEGLHEPAPCFDWFLHAIQIDAESNFENGV
KAB8113402.1 hypothetical protein EE612_052396 [Oryza sativa]4.2e-0536.36Show/hide
Query:  PGTDQLVHKSIDYFEVVPKRSFGTNVEKSFQFPERIDVAPENLSARIIEGLHEPAPCFDWFLHAIQIDAESNFENGV
        PGTD+LVH+ +D  + + +R  G +VE+  Q PERI+VA + + A ++E L E AP     +  +++  E + E+G+
Subjt:  PGTDQLVHKSIDYFEVVPKRSFGTNVEKSFQFPERIDVAPENLSARIIEGLHEPAPCFDWFLHAIQIDAESNFENGV
TrEMBL top hitse value%identityAlignment
A0A0P0XWI4 Os10g0525301 protein3.5e-0535.06Show/hide
Query:  PGTDQLVHKSIDYFEVVPKRSFGTNVEKSFQFPERIDVAPENLSARIIEGLHEPAPCFDWFLHAIQIDAESNFENGV
        PGTD+LVH+ +D  + + +R  G +VE+  Q PER++VA + + A ++E L E AP     +  +++  E + E+G+
Subjt:  PGTDQLVHKSIDYFEVVPKRSFGTNVEKSFQFPERIDVAPENLSARIIEGLHEPAPCFDWFLHAIQIDAESNFENGV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACAATTTTCTCCTGGCACTGATCAACTGGTGCACAAAAGCATCGATTACTTTGAGGTTGTTCCTAAACGAAGCTTCGGAACCAATGTTGAGAAATCTTTTCAATT
TCCAGAAAGGATCGATGTAGCGCCAGAAAACCTGAGCGCTAGAATCATCGAAGGCCTTCATGAACCCGCTCCCTGCTTTGATTGGTTCCTCCATGCAATTCAAATCGACG
CCGAATCCAACTTTGAAAATGGAGTCCAAAGAGCATCGCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGACACAATTTTCTCCTGGCACTGATCAACTGGTGCACAAAAGCATCGATTACTTTGAGGTTGTTCCTAAACGAAGCTTCGGAACCAATGTTGAGAAATCTTTTCAATT
TCCAGAAAGGATCGATGTAGCGCCAGAAAACCTGAGCGCTAGAATCATCGAAGGCCTTCATGAACCCGCTCCCTGCTTTGATTGGTTCCTCCATGCAATTCAAATCGACG
CCGAATCCAACTTTGAAAATGGAGTCCAAAGAGCATCGCATTAG
Protein sequenceShow/hide protein sequence
MTQFSPGTDQLVHKSIDYFEVVPKRSFGTNVEKSFQFPERIDVAPENLSARIIEGLHEPAPCFDWFLHAIQIDAESNFENGVQRASH