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Lsi05G020220 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G020220
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:27236499..27239396
RNA-Seq ExpressionLsi05G020220
SyntenyLsi05G020220
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650256.1 hypothetical protein Csa_010285, partial [Cucumis sativus]1.5e-1145.31Show/hide
Query:  KNFGRRTKKEK---ETTPRNQEKLGQLKPQAVRSLVYQIKSNATGQDGRLRRIKYKTKFIHQGGL----VDHIKGICRAFR------ENKNGG-------
        +  G R KK K      P+ + K GQLKPQAVRSLVYQ+ +NATGQDGRLRRI YK+KFIHQ  L    V+    + +  R      ENK GG       
Subjt:  KNFGRRTKKEK---ETTPRNQEKLGQLKPQAVRSLVYQIKSNATGQDGRLRRIKYKTKFIHQGGL----VDHIKGICRAFR------ENKNGG-------

Query:  ---------------RREEMKAICLRLS
                       R  EMKAICL LS
Subjt:  ---------------RREEMKAICLRLS
TrEMBL top hitse value%identityAlignment
A0A0A0L497 Uncharacterized protein1.2e-1650.86Show/hide
Query:  KNFGRRTKKEK---ETTPRNQEKLGQLKPQAVRSLVYQIKSNATGQDGRLRRIKYKTKFIHQ------------------------------GGLVDHIK
        +  G R KK K      P+ + K GQLKPQAVRSLVYQ+ +NATGQDGRLRRI YK+KFIHQ                              GGLVDH K
Subjt:  KNFGRRTKKEK---ETTPRNQEKLGQLKPQAVRSLVYQIKSNATGQDGRLRRIKYKTKFIHQ------------------------------GGLVDHIK

Query:  GICRAFRENKNGGRRE
        G  RAF ENKNGG RE
Subjt:  GICRAFRENKNGGRRE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAATAAAGCGAAGAAGAATTCTCAAATGCTGGTAGAGCAGAAAAAGCATTTTAAGATTGCTCTACTACTTGTTCCTCGGATTGAGGCTGAGGCTCGGCATCTTCT
TCGGAATGTTCGGCCGGGGGCCAGCTTCAAGGACATGGCTATAGTTGCCTTTGACCAGGAAGAGCTGAGCAAAATGGTGCTTGCAGTACAAGACTCCATCAAGAGCAGCA
TAAGAAGAGTGTGTCAAATGGCATCCACCATGAGCACATCTAAAGCAATTCTTGTGAGAAAAACTAACCGAAAGGGTGCCTTTGCAGTGGCTGCATTTGAAGCACTGCTT
GTGATAAGGATTCCCCTCAAGGGACAACAAATCAACGACATAAACAGTCTTATCACAAGCCTTGCATTTATCCAACGTTCCTGTGAAAGCCATTATGAAGAAATTACTCT
TTTACAAGATCAACTCGATCCGAGACGCAAGAACTTCGGGAGAAGAACAAAAAAAGAGAAAGAAACCACCCCCAGAAACCAAGAAAAACTAGGGCAATTAAAACCCCAAG
CCGTCCGAAGCCTTGTCTACCAGATAAAATCGAATGCGACTGGACAAGATGGAAGGCTTCGAAGGATTAAGTACAAGACCAAATTTATACATCAGGGCGGATTGGTTGAC
CATATCAAAGGAATTTGTCGAGCTTTTCGAGAGAACAAAAATGGAGGGCGGAGAGAAGAGATGAAAGCCATTTGCCTTCGATTATCTGACTGGTTCGCCGTTGTGTTCGT
TGAACTGGATGACAGCGTTTCCCGGGTTATTATTTTTATTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGAATAAAGCGAAGAAGAATTCTCAAATGCTGGTAGAGCAGAAAAAGCATTTTAAGATTGCTCTACTACTTGTTCCTCGGATTGAGGCTGAGGCTCGGCATCTTCT
TCGGAATGTTCGGCCGGGGGCCAGCTTCAAGGACATGGCTATAGTTGCCTTTGACCAGGAAGAGCTGAGCAAAATGGTGCTTGCAGTACAAGACTCCATCAAGAGCAGCA
TAAGAAGAGTGTGTCAAATGGCATCCACCATGAGCACATCTAAAGCAATTCTTGTGAGAAAAACTAACCGAAAGGGTGCCTTTGCAGTGGCTGCATTTGAAGCACTGCTT
GTGATAAGGATTCCCCTCAAGGGACAACAAATCAACGACATAAACAGTCTTATCACAAGCCTTGCATTTATCCAACGTTCCTGTGAAAGCCATTATGAAGAAATTACTCT
TTTACAAGATCAACTCGATCCGAGACGCAAGAACTTCGGGAGAAGAACAAAAAAAGAGAAAGAAACCACCCCCAGAAACCAAGAAAAACTAGGGCAATTAAAACCCCAAG
CCGTCCGAAGCCTTGTCTACCAGATAAAATCGAATGCGACTGGACAAGATGGAAGGCTTCGAAGGATTAAGTACAAGACCAAATTTATACATCAGGGCGGATTGGTTGAC
CATATCAAAGGAATTTGTCGAGCTTTTCGAGAGAACAAAAATGGAGGGCGGAGAGAAGAGATGAAAGCCATTTGCCTTCGATTATCTGACTGGTTCGCCGTTGTGTTCGT
TGAACTGGATGACAGCGTTTCCCGGGTTATTATTTTTATTTTTTGA
Protein sequenceShow/hide protein sequence
MMNKAKKNSQMLVEQKKHFKIALLLVPRIEAEARHLLRNVRPGASFKDMAIVAFDQEELSKMVLAVQDSIKSSIRRVCQMASTMSTSKAILVRKTNRKGAFAVAAFEALL
VIRIPLKGQQINDINSLITSLAFIQRSCESHYEEITLLQDQLDPRRKNFGRRTKKEKETTPRNQEKLGQLKPQAVRSLVYQIKSNATGQDGRLRRIKYKTKFIHQGGLVD
HIKGICRAFRENKNGGRREEMKAICLRLSDWFAVVFVELDDSVSRVIIFIF