CuGenDBv2

Gene ID	Lsi05G020330
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	UvrABC system protein A
Genome location	chr05:27307057..27309703
RNA-Seq Expression	Lsi05G020330
Synteny	Lsi05G020330
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008438057.1 PREDICTED: uncharacterized protein LOC103483279 [Cucumis melo]

5.3e-31

92.31

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Query:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSIKGFIFGPNNQSQESRREKLGSNGVKDN
        MVN RTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDP+KK ILSAESSIKGFIFG NNQSQE +REKLGSNGVKDN
Subjt:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSIKGFIFGPNNQSQESRREKLGSNGVKDN

XP_011650756.1 uncharacterized protein LOC105434815 [Cucumis sativus]

6.9e-31

92.31

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Query:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSIKGFIFGPNNQSQESRREKLGSNGVKDN
        MVN RTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDP+KK ILSAESSIKGFIFG NNQSQE +REKLGSNGVKDN
Subjt:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSIKGFIFGPNNQSQESRREKLGSNGVKDN

XP_022147242.1 uncharacterized protein LOC111016239 [Momordica charantia]

9.7e-33

93.67

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Query:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSIKGFIFGPNNQSQESRREKLGSNGVKDNP
        MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPI+KFILSAESS+KGFIFG NNQSQES+REKLGSNGVKD P
Subjt:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSIKGFIFGPNNQSQESRREKLGSNGVKDNP

XP_022924545.1 uncharacterized protein LOC111431996 [Cucurbita moschata]

4.8e-32

93.67

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Query:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSIKGFIFGPNNQSQESRREKLGSNGVKDNP
        MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILS ESSIKGFIFG NNQSQ S+ EKLGSNGVKDNP
Subjt:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSIKGFIFGPNNQSQESRREKLGSNGVKDNP

XP_038906565.1 uncharacterized protein LOC120092525 [Benincasa hispida]

9.1e-31

91.14

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Query:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSIKGFIFGPNNQSQESRREKLGSNGVKDNP
        MVN RTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESS+KGFIFG N  SQES+ EKLGSNGVKDNP
Subjt:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSIKGFIFGPNNQSQESRREKLGSNGVKDNP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L7H0 Uncharacterized protein

3.4e-31

92.31

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Query:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSIKGFIFGPNNQSQESRREKLGSNGVKDN
        MVN RTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDP+KK ILSAESSIKGFIFG NNQSQE +REKLGSNGVKDN
Subjt:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSIKGFIFGPNNQSQESRREKLGSNGVKDN

A0A1S3AW35 uncharacterized protein LOC103483279

2.6e-31

92.31

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Query:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSIKGFIFGPNNQSQESRREKLGSNGVKDN
        MVN RTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDP+KK ILSAESSIKGFIFG NNQSQE +REKLGSNGVKDN
Subjt:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSIKGFIFGPNNQSQESRREKLGSNGVKDN

A0A6J1D1U5 uncharacterized protein LOC111016239

4.7e-33

93.67

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Query:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSIKGFIFGPNNQSQESRREKLGSNGVKDNP
        MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPI+KFILSAESS+KGFIFG NNQSQES+REKLGSNGVKD P
Subjt:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSIKGFIFGPNNQSQESRREKLGSNGVKDNP

A0A6J1EFB9 uncharacterized protein LOC111431996

2.3e-32

93.67

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Query:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSIKGFIFGPNNQSQESRREKLGSNGVKDNP
        MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILS ESSIKGFIFG NNQSQ S+ EKLGSNGVKDNP
Subjt:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSIKGFIFGPNNQSQESRREKLGSNGVKDNP

A0A6J1IWD0 uncharacterized protein LOC111479819

2.3e-32

93.67

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Query:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSIKGFIFGPNNQSQESRREKLGSNGVKDNP
        MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILS ESSIKGFIFG NNQSQ S+ EKLGSNGVKDNP
Subjt:  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSIKGFIFGPNNQSQESRREKLGSNGVKDNP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G01725.1 unknown protein

3.7e-14

55.56

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Query:  VNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSIKGFIFGPNNQSQE
        +NP+ +K+++ T++VAT   SYFLLTADYGP+PN LDPI++ ILSA+ S+K FIF P+ +S +
Subjt:  VNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSIKGFIFGPNNQSQE

AT4G00530.1 unknown protein

2.9e-19

68.33

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Query:  VNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSIKGFIFGPNNQ
        +NP+TDK++RRTTMVAT  ASYFLLT DYGP+PN LDPIK+ IL+A+ S+K FIFGP  +
Subjt:  VNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSIKGFIFGPNNQ

Sequences

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CDS sequence

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ATGGTGAATCCGCGAACAGACAAGTTGCTGAGAAGAACAACTATGGTGGCCACTGTCACTGCTTCCTACTTTCTCTTAACCGCCGATTATGGCCCTCAACCCAATTTTCT
CGATCCCATCAAAAAGTTTATACTGTCAGCAGAAAGTTCTATTAAGGGTTTCATCTTTGGACCAAATAATCAATCTCAAGAAAGTCGAAGAGAGAAGCTCGGCTCCAATG
GTGTCAAGGACAATCCATGA

mRNA sequence

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AAAAAAAAAAAAAAAACCGGGGCGGCGAAACACGATTTCTTCTCCGTCGAAGCAGTTAATTTCGAAATTGAGAGGTGGAATTGATAGAGGGAACAGAAATGGTGAATCCG
CGAACAGACAAGTTGCTGAGAAGAACAACTATGGTGGCCACTGTCACTGCTTCCTACTTTCTCTTAACCGCCGATTATGGCCCTCAACCCAATTTTCTCGATCCCATCAA
AAAGTTTATACTGTCAGCAGAAAGTTCTATTAAGGGTTTCATCTTTGGACCAAATAATCAATCTCAAGAAAGTCGAAGAGAGAAGCTCGGCTCCAATGGTGTCAAGGACA
ATCCATGATAAGTAGACTTCAAGGATTTCGTTACGACTTTATGTATATATATCTTGAATCTACAGTTTTTTATTATACATTTCCTAAAGCTTAGTTTGAGATCAAGCATG
AGTAAACCTTTTGGAGGAATCAAATAATGAAGTTTGTTTAGATTATAAGATGTTTAATGAATTGGTTATTACCAAATCCATTTAGCATATTAACCTCAGAGATTCAAATT
ACTTCCAGCATATTTCTGGATTGGTGTAGGTTCATTTTTTTTTCTTTTATTATCTGATAAGGCATGATATCTGTTAGGAGCCAAAGGTAGTATGGGCTACCTTTATCCCA
TATTGGTTAGAATGGGATGACCAATGTGGTACTCAAGTGGCTTAGCTCTCTCACTTCAATAGCTAGCTTTTGGGGTGTGGTTCTCCAAGGTGCTTAAGTACCTAACAATG
GTATCAGAGCCGGTTGTTGACATTCTAGAGTGGAACTGGCGGACGGTTCTGACCGGGTGTGGCTGAGTGAAGTATCGTTGGAGTAGCCGCTGGGACGTCGGCTTTCCGGA
GATGGGGTATTGTTAGGAACCAAGGTAGTATGGGCTACCTTTGTCCCACATTGGTTAGAATGGGATGACCAATGTGGTACTTAAGTGGCTTGGCTCTCCCACCTCAATAG
CTAGCTTTTGGGGTGTGGTTCTCTAAGGTGCTTAAGTACTTAACAATATCATATCAAGTGGTTCATGAGAGACCACTCTTAGTTATTTTAAACTCCTGTAAAATATGAAG
ATAATTAGATTAGCTGTAGTTCTTGTAAATTCTTGTAAAGAATGAACATTCTTCTGATTTGGGAGTTTTAGTGAAATGTTATTTTGTGCTG

Protein sequence

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MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSAESSIKGFIFGPNNQSQESRREKLGSNGVKDNP

Lsi05G020330 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome