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Lsi05G020340 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G020340
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:27310941..27313661
RNA-Seq ExpressionLsi05G020340
SyntenyLsi05G020340
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004133867.1 uncharacterized protein LOC101223085 [Cucumis sativus]2.4e-6491.5Show/hide
Query:  MSSDKPGEDAGVSGFESEETEPDSELEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLESSRPLAIGASEPGISARPDHEDDEQTTGGEGTVLDEEGLE
        MS DKPGEDAGVSGFE EETEPDSELEELELEV+QMAQRILHYRSTLSAQ+KSSF SLLESSRPLAI ASEPGISARPDHEDDEQTT GE T L EEGLE
Subjt:  MSSDKPGEDAGVSGFESEETEPDSELEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLESSRPLAIGASEPGISARPDHEDDEQTTGGEGTVLDEEGLE

Query:  TAKKIQLLKDKISSNITMIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKKPS
        TAKKIQL+KDKISSN TMIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKK S
Subjt:  TAKKIQLLKDKISSNITMIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKKPS

XP_008438056.1 PREDICTED: uncharacterized protein LOC103483278 [Cucumis melo]3.2e-6491.39Show/hide
Query:  MSSDKPGEDAGVSGFESEETEPDSELEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLESSRPLAIGASEPGISARPDHEDDEQTTGGEGTVLDEEGLE
        MSSDKPGEDAGVSGFESEETEPDSELEELELEV+QMAQRILHYRST+ A++KSSF SLLESSRPLAI ASEPGISARP HEDDEQTT GE T+L EEGLE
Subjt:  MSSDKPGEDAGVSGFESEETEPDSELEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLESSRPLAIGASEPGISARPDHEDDEQTTGGEGTVLDEEGLE

Query:  TAKKIQLLKDKISSNITMIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKK
        TAKKIQL+KDKISSNITMIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKK
Subjt:  TAKKIQLLKDKISSNITMIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKK

XP_022974668.1 uncharacterized protein LOC111473350 isoform X1 [Cucurbita maxima]3.1e-5984.42Show/hide
Query:  MSSDKPGEDAGVSGFESEETEPDSELEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLESSRPLAIGASEPGISARPDHEDDE-QTTGGEGTVLDEEGL
        MS DKPGED GVSGFESEE EPDSE EELELEV QMAQRILHYRSTLSAQLKSSF SLLES+RP+A GASEPGIS  P+HEDDE Q T GEGTVL +EGL
Subjt:  MSSDKPGEDAGVSGFESEETEPDSELEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLESSRPLAIGASEPGISARPDHEDDE-QTTGGEGTVLDEEGL

Query:  ETAKKIQLLKDKISSNITMIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKKPS
        ET KKIQLLKDKISSNI+MIP VLKRMKDCISTID LDSYNG IHPAFKR+K S
Subjt:  ETAKKIQLLKDKISSNITMIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKKPS

XP_023540790.1 uncharacterized protein LOC111801058 isoform X1 [Cucurbita pepo subsp. pepo]2.1e-6085.06Show/hide
Query:  MSSDKPGEDAGVSGFESEETEPDSELEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLESSRPLAIGASEPGISARPDHEDDE-QTTGGEGTVLDEEGL
        MS DKPGED GVSGFESEE EPDSELEELELEV QMAQRILHYRSTLSAQLKSSF SLLES+RP+A G SEPGIS  P+HEDDE Q TGGEGTVL +EGL
Subjt:  MSSDKPGEDAGVSGFESEETEPDSELEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLESSRPLAIGASEPGISARPDHEDDE-QTTGGEGTVLDEEGL

Query:  ETAKKIQLLKDKISSNITMIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKKPS
        ET KKIQLLKDKISSNI+MIP VLKRMKDCISTID LDSYNG IHPAFKR+K S
Subjt:  ETAKKIQLLKDKISSNITMIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKKPS

XP_038906552.1 uncharacterized protein LOC120092518 [Benincasa hispida]5.1e-7096.08Show/hide
Query:  MSSDKPGEDAGVSGFESEETEPDSELEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLESSRPLAIGASEPGISARPDHEDDEQTTGGEGTVLDEEGLE
        MSSDKPGEDAGVSGFESEETEPDSEL+ELELEVKQMAQRILHYRSTLSAQLKSSF SLLESSRPLAIGASEPGISARP+HEDDEQTT GEGTVL EEGLE
Subjt:  MSSDKPGEDAGVSGFESEETEPDSELEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLESSRPLAIGASEPGISARPDHEDDEQTTGGEGTVLDEEGLE

Query:  TAKKIQLLKDKISSNITMIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKKPS
        TAKKIQLLKDKISSNITMIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKK S
Subjt:  TAKKIQLLKDKISSNITMIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKKPS

TrEMBL top hitse value%identityAlignment
A0A0A0L8X5 Uncharacterized protein1.2e-6491.5Show/hide
Query:  MSSDKPGEDAGVSGFESEETEPDSELEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLESSRPLAIGASEPGISARPDHEDDEQTTGGEGTVLDEEGLE
        MS DKPGEDAGVSGFE EETEPDSELEELELEV+QMAQRILHYRSTLSAQ+KSSF SLLESSRPLAI ASEPGISARPDHEDDEQTT GE T L EEGLE
Subjt:  MSSDKPGEDAGVSGFESEETEPDSELEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLESSRPLAIGASEPGISARPDHEDDEQTTGGEGTVLDEEGLE

Query:  TAKKIQLLKDKISSNITMIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKKPS
        TAKKIQL+KDKISSN TMIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKK S
Subjt:  TAKKIQLLKDKISSNITMIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKKPS

A0A1S3AVF8 uncharacterized protein LOC1034832781.5e-6491.39Show/hide
Query:  MSSDKPGEDAGVSGFESEETEPDSELEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLESSRPLAIGASEPGISARPDHEDDEQTTGGEGTVLDEEGLE
        MSSDKPGEDAGVSGFESEETEPDSELEELELEV+QMAQRILHYRST+ A++KSSF SLLESSRPLAI ASEPGISARP HEDDEQTT GE T+L EEGLE
Subjt:  MSSDKPGEDAGVSGFESEETEPDSELEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLESSRPLAIGASEPGISARPDHEDDEQTTGGEGTVLDEEGLE

Query:  TAKKIQLLKDKISSNITMIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKK
        TAKKIQL+KDKISSNITMIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKK
Subjt:  TAKKIQLLKDKISSNITMIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKK

A0A6J1FKW2 uncharacterized protein LOC111444897 isoform X13.3e-5983.77Show/hide
Query:  MSSDKPGEDAGVSGFESEETEPDSELEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLESSRPLAIGASEPGISARPDHEDDE-QTTGGEGTVLDEEGL
        MS DKPGED GVSGFESEE EPDSELEELELEV QMAQRILHYRSTLSAQLKSSF SLLES+RP+A G SEPGIS  P+HEDDE Q T GEGTVL +EGL
Subjt:  MSSDKPGEDAGVSGFESEETEPDSELEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLESSRPLAIGASEPGISARPDHEDDE-QTTGGEGTVLDEEGL

Query:  ETAKKIQLLKDKISSNITMIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKKPS
        E  KKIQLLKDKISSNI+MIP VLKRMKDCISTID LDSYNG IHPAFKR+K S
Subjt:  ETAKKIQLLKDKISSNITMIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKKPS

A0A6J1IGZ6 uncharacterized protein LOC111473350 isoform X11.5e-5984.42Show/hide
Query:  MSSDKPGEDAGVSGFESEETEPDSELEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLESSRPLAIGASEPGISARPDHEDDE-QTTGGEGTVLDEEGL
        MS DKPGED GVSGFESEE EPDSE EELELEV QMAQRILHYRSTLSAQLKSSF SLLES+RP+A GASEPGIS  P+HEDDE Q T GEGTVL +EGL
Subjt:  MSSDKPGEDAGVSGFESEETEPDSELEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLESSRPLAIGASEPGISARPDHEDDE-QTTGGEGTVLDEEGL

Query:  ETAKKIQLLKDKISSNITMIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKKPS
        ET KKIQLLKDKISSNI+MIP VLKRMKDCISTID LDSYNG IHPAFKR+K S
Subjt:  ETAKKIQLLKDKISSNITMIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKKPS

A0A6J1IZA2 uncharacterized protein LOC1114798077.6e-5683.23Show/hide
Query:  MSSDKPGEDAGVSGFESEETEPDSELEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLESSRPLAIGASEPGISAR-PDHEDDEQ-TTGGEGTVLDEEG
        MS D PGEDAGVSGFES++TEP  E+EELELEV Q+AQRI HYRSTLSAQLKSSFFSLLESSRPL +GASE G SA  PDHEDDEQ TT GEGTV  EEG
Subjt:  MSSDKPGEDAGVSGFESEETEPDSELEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLESSRPLAIGASEPGISAR-PDHEDDEQ-TTGGEGTVLDEEG

Query:  LETAKKIQLLKDKISSNITMIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKKPS
        LETAKKIQLL+DKISSNI +IPTVLKRMKDCISTID L SYNGVIHPAFKRKK S
Subjt:  LETAKKIQLLKDKISSNITMIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKKPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G00525.1 unknown protein8.4e-1542.42Show/hide
Query:  DSELEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLESSRPLAIGASEPGISARPDHEDDEQTTGGEGT---VLDEEGLETAKKIQLLKDKISSNITMI
        + +LE+LE +VKQMA++I  YR TL   L+++  S L S  P+      P I +  D       T  E     VL+E+  E  K IQ LK+++S N   I
Subjt:  DSELEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLESSRPLAIGASEPGISARPDHEDDEQTTGGEGT---VLDEEGLETAKKIQLLKDKISSNITMI

Query:  PTVLKRMKDCISTIDKLDSYNGVIHPAFKRKK
        P V+KRM++CI +IDKLDS    IHPAFKR++
Subjt:  PTVLKRMKDCISTIDKLDSYNGVIHPAFKRKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTCAGACAAACCCGGTGAAGACGCCGGGGTTTCTGGATTTGAATCCGAAGAAACCGAGCCCGATTCTGAGCTTGAGGAGCTGGAGCTTGAAGTTAAGCAAATGGC
TCAGAGGATTCTTCACTATAGATCCACTCTGTCGGCTCAACTCAAGTCCTCGTTCTTTTCGTTACTTGAATCCTCGAGGCCTCTCGCCATTGGAGCCTCGGAGCCGGGAA
TATCTGCTCGTCCGGATCATGAAGATGATGAACAAACCACAGGAGGTGAAGGTACAGTCCTTGATGAAGAGGGTTTAGAAACTGCAAAGAAGATACAATTGCTTAAAGAT
AAAATATCAAGTAATATCACTATGATCCCTACAGTCCTGAAGAGGATGAAAGACTGTATTTCAACAATTGACAAATTGGATTCTTATAATGGAGTCATTCATCCTGCATT
CAAAAGGAAAAAACCTAGCTGA
mRNA sequenceShow/hide mRNA sequence
CGGCCCTTCTCGGCTAATCGATTTCATAATACCATTCGATTTTCCACGTTGAACATTCAAATTTCGAAATCCATTGCCCTCCAAAATCCCAAGATTTGCATTCGATTCAA
TTCGAACACACAACTAAATTTCGTTGCTCAGATCTTTCAATCCTACTTTCTGTAGAAACTGGCTGTGACTATAAACTCAAACATGTCCTCAGACAAACCCGGTGAAGACG
CCGGGGTTTCTGGATTTGAATCCGAAGAAACCGAGCCCGATTCTGAGCTTGAGGAGCTGGAGCTTGAAGTTAAGCAAATGGCTCAGAGGATTCTTCACTATAGATCCACT
CTGTCGGCTCAACTCAAGTCCTCGTTCTTTTCGTTACTTGAATCCTCGAGGCCTCTCGCCATTGGAGCCTCGGAGCCGGGAATATCTGCTCGTCCGGATCATGAAGATGA
TGAACAAACCACAGGAGGTGAAGGTACAGTCCTTGATGAAGAGGGTTTAGAAACTGCAAAGAAGATACAATTGCTTAAAGATAAAATATCAAGTAATATCACTATGATCC
CTACAGTCCTGAAGAGGATGAAAGACTGTATTTCAACAATTGACAAATTGGATTCTTATAATGGAGTCATTCATCCTGCATTCAAAAGGAAAAAACCTAGCTGAATTTAA
CTGGCAAGTACATCAATATCAGAATCTAGTCTTGGTATAGAGGAGCTCACCATCAATCCCTCCATAGTCCTTGCGTTGCTAACATCAAAGATGACACTGCTGAGTCCCTT
CCCTACAACTACGATTTTTCTCCCAACGGCGACAAGTTGACATGGCGGTCTCGTCAGAAGGGCAGAAAATCTCCCTACTGGAATCCATTCCTTGTCTTCATTGTTCCACA
TCATCAATCTGGTTCCAGAACTTTGGTCCAAGACATAAAGGGTTTTGTCTACGATAACCGCTGGACCTCGC
Protein sequenceShow/hide protein sequence
MSSDKPGEDAGVSGFESEETEPDSELEELELEVKQMAQRILHYRSTLSAQLKSSFFSLLESSRPLAIGASEPGISARPDHEDDEQTTGGEGTVLDEEGLETAKKIQLLKD
KISSNITMIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKKPS