; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G020410 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G020410
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:27378853..27390205
RNA-Seq ExpressionLsi05G020410
SyntenyLsi05G020410
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019009.1 hypothetical protein SDJN02_20886, partial [Cucurbita argyrosperma subsp. argyrosperma]8.5e-1592.16Show/hide
Query:  MPGLRRKNGDRTEIAGLVYLQPHLIETLSARRLRSQKLFNYSIGTAGVIEL
        MPGLRRKNGDRTEIAGLVYLQPHLIE LSA RLRSQKLFN SI TAGVIEL
Subjt:  MPGLRRKNGDRTEIAGLVYLQPHLIETLSARRLRSQKLFNYSIGTAGVIEL
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTCTAATTTCGAGATATTGTCTCGAACTAAAGATCATTATGATGATCTGGCATACGGAATAAAGTATGGCAAGACAAGAAGACCGACTCCCGTTAAAGCTGATAC
TTTTTGTTTCATTAATAGCAATGATAGACAAAAAGTGCACAGAATTTTGAGTAGGCTGAAATGCACTTCTCAGAGGTCAATCTCTTTCAAAAGGTTGGCAGAGTACGGCT
TGGATAGATGCATTTTAAAAGAATATTTCCACACGCATGAGATAAAAGACTACAAGACAAATTTTCAAGTTGTGCATCAAAAAGTAATCTTTCATGCTACAAATGTATTA
TCCATCGATATCAAAATAAATGAATGTGGTGTAACGATTCCAGGAAATCCTATCCATTGTTTAAGTGACAACCTTGATTGTCAAATCTTTCTTAAGGACATCGAATTCCC
ATCCCTAATTTCCCCACAAATTGCTGGAGAAACTTCTTTCGATCTCCTCATCAGAATCAACAATAACTCTATATTCTCTTTCCAGCACCAGGCACTGCTAATATTTAAGG
GAAATTTGGACTCGCAGATTGGAATACATCAATTCAATCTAAACCTATTCACCATTATCAGTAATTCATTCATGAAAACACTAGGAATCAAGCTAGTTATTATGAAAACT
GAGATTCATACATTTTACATCGATGTCGCTTTTGCTGTGGAACATCCAAACAAGCAGATATCACTGTGGAGAGAATCCAAGATCTTTCCAAACTTGTTTAATGAGTTTTC
AATAGTTCCAAGGCGGCGGGGGAGGTTTCTTTCTGAGGTGAACGGTTCTTTTTTCCTTCACAGCAGAGAATTCCTCTTGCTCTGCGATCACAAAAGGGTTTTAAAGGGAC
GGAGTAGACTTGAAATTATCTCCCTGGAGTTGAACACAGTTCATGCATATGAAAATATTCTGCAGAATGAAGAATTGAAGGAATGCACTACTATGGGGAAAACTGTTTTT
TTGAAGAGAATGATTGCCATGTTCTTAAGTCGTATCAGTTACTATTTTGAAGAGATTAGATATGAGAATGACAGCCAAGAAAGCCCCATTCAATACCAGCATGTATTACA
CAGTTCTGAGAAAGTTGAGAATACATGCCGTGCTGAGATGAAAATCCCTGAGAAAAGGATTGTTGCGAAGGTTGTGATCGCAACTGTGGTGCTTGCTGCCCGATGCATGC
CTGGATTGAGGAGGAAGAACGGAGATAGAACTGAGATCGCAGGCCTTGTTTATCTTCAGCCGCATTTGATTGAAACACTCTCCGCGCGAAGACTGAGAAGCCAAAAGCTG
TTCAACTATTCGATCGGAACTGCCGGCGTAATCGAGCTAATAGAAGAACGATTGCGAATCGCAACCAAAAATCGCTTTGCTTGCAGTAAAGAAATGAGAAGGATTTCCAA
GCTTGAAGCTCCAAATGACAAATATGACAATAAGAACAATGGCGGGAAACGCCGCACACAAACCCCAAAAACCCAGCCTAGATTTGCAATCACCTTCTTCATGGAAATAT
GCCAGCCCAGCCAGTCTCACTTGCATTCCAGTCAACTATTCAAACTGAGATCTTTTATCACAAAGATTCTGGACTCATCGAGGGTCGGATTCGTGAGGGCATTTGAACAA
AATCTCGCCGGTACTGAAGAGAATTTCTTGGTAATCAAATTCATCAAGATCAAAATCTTGGTCGTCGTAGCTTCTTGCCATTGCTTCATCGTCCATAAGGTTTTCCTCCA
TTCTATCTGGAAAAACCTCTGCAACATCTTCATCGCTGCTACCTCCATCTTCTTCCTCTTCATCATAGGCAGGTCTGACCATCGACCAATATACAAAATGTGGCCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGTCTAATTTCGAGATATTGTCTCGAACTAAAGATCATTATGATGATCTGGCATACGGAATAAAGTATGGCAAGACAAGAAGACCGACTCCCGTTAAAGCTGATAC
TTTTTGTTTCATTAATAGCAATGATAGACAAAAAGTGCACAGAATTTTGAGTAGGCTGAAATGCACTTCTCAGAGGTCAATCTCTTTCAAAAGGTTGGCAGAGTACGGCT
TGGATAGATGCATTTTAAAAGAATATTTCCACACGCATGAGATAAAAGACTACAAGACAAATTTTCAAGTTGTGCATCAAAAAGTAATCTTTCATGCTACAAATGTATTA
TCCATCGATATCAAAATAAATGAATGTGGTGTAACGATTCCAGGAAATCCTATCCATTGTTTAAGTGACAACCTTGATTGTCAAATCTTTCTTAAGGACATCGAATTCCC
ATCCCTAATTTCCCCACAAATTGCTGGAGAAACTTCTTTCGATCTCCTCATCAGAATCAACAATAACTCTATATTCTCTTTCCAGCACCAGGCACTGCTAATATTTAAGG
GAAATTTGGACTCGCAGATTGGAATACATCAATTCAATCTAAACCTATTCACCATTATCAGTAATTCATTCATGAAAACACTAGGAATCAAGCTAGTTATTATGAAAACT
GAGATTCATACATTTTACATCGATGTCGCTTTTGCTGTGGAACATCCAAACAAGCAGATATCACTGTGGAGAGAATCCAAGATCTTTCCAAACTTGTTTAATGAGTTTTC
AATAGTTCCAAGGCGGCGGGGGAGGTTTCTTTCTGAGGTGAACGGTTCTTTTTTCCTTCACAGCAGAGAATTCCTCTTGCTCTGCGATCACAAAAGGGTTTTAAAGGGAC
GGAGTAGACTTGAAATTATCTCCCTGGAGTTGAACACAGTTCATGCATATGAAAATATTCTGCAGAATGAAGAATTGAAGGAATGCACTACTATGGGGAAAACTGTTTTT
TTGAAGAGAATGATTGCCATGTTCTTAAGTCGTATCAGTTACTATTTTGAAGAGATTAGATATGAGAATGACAGCCAAGAAAGCCCCATTCAATACCAGCATGTATTACA
CAGTTCTGAGAAAGTTGAGAATACATGCCGTGCTGAGATGAAAATCCCTGAGAAAAGGATTGTTGCGAAGGTTGTGATCGCAACTGTGGTGCTTGCTGCCCGATGCATGC
CTGGATTGAGGAGGAAGAACGGAGATAGAACTGAGATCGCAGGCCTTGTTTATCTTCAGCCGCATTTGATTGAAACACTCTCCGCGCGAAGACTGAGAAGCCAAAAGCTG
TTCAACTATTCGATCGGAACTGCCGGCGTAATCGAGCTAATAGAAGAACGATTGCGAATCGCAACCAAAAATCGCTTTGCTTGCAGTAAAGAAATGAGAAGGATTTCCAA
GCTTGAAGCTCCAAATGACAAATATGACAATAAGAACAATGGCGGGAAACGCCGCACACAAACCCCAAAAACCCAGCCTAGATTTGCAATCACCTTCTTCATGGAAATAT
GCCAGCCCAGCCAGTCTCACTTGCATTCCAGTCAACTATTCAAACTGAGATCTTTTATCACAAAGATTCTGGACTCATCGAGGGTCGGATTCGTGAGGGCATTTGAACAA
AATCTCGCCGGTACTGAAGAGAATTTCTTGGTAATCAAATTCATCAAGATCAAAATCTTGGTCGTCGTAGCTTCTTGCCATTGCTTCATCGTCCATAAGGTTTTCCTCCA
TTCTATCTGGAAAAACCTCTGCAACATCTTCATCGCTGCTACCTCCATCTTCTTCCTCTTCATCATAGGCAGGTCTGACCATCGACCAATATACAAAATGTGGCCGTAG
Protein sequenceShow/hide protein sequence
MVSNFEILSRTKDHYDDLAYGIKYGKTRRPTPVKADTFCFINSNDRQKVHRILSRLKCTSQRSISFKRLAEYGLDRCILKEYFHTHEIKDYKTNFQVVHQKVIFHATNVL
SIDIKINECGVTIPGNPIHCLSDNLDCQIFLKDIEFPSLISPQIAGETSFDLLIRINNNSIFSFQHQALLIFKGNLDSQIGIHQFNLNLFTIISNSFMKTLGIKLVIMKT
EIHTFYIDVAFAVEHPNKQISLWRESKIFPNLFNEFSIVPRRRGRFLSEVNGSFFLHSREFLLLCDHKRVLKGRSRLEIISLELNTVHAYENILQNEELKECTTMGKTVF
LKRMIAMFLSRISYYFEEIRYENDSQESPIQYQHVLHSSEKVENTCRAEMKIPEKRIVAKVVIATVVLAARCMPGLRRKNGDRTEIAGLVYLQPHLIETLSARRLRSQKL
FNYSIGTAGVIELIEERLRIATKNRFACSKEMRRISKLEAPNDKYDNKNNGGKRRTQTPKTQPRFAITFFMEICQPSQSHLHSSQLFKLRSFITKILDSSRVGFVRAFEQ
NLAGTEENFLVIKFIKIKILVVVASCHCFIVHKVFLHSIWKNLCNIFIAATSIFFLFIIGRSDHRPIYKMWP