; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G020500 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G020500
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRING-type domain-containing protein
Genome locationchr05:27452091..27455010
RNA-Seq ExpressionLsi05G020500
SyntenyLsi05G020500
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0005829 - cytosol (cellular component)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582620.1 putative E3 ubiquitin-protein ligase RHB1A, partial [Cucurbita argyrosperma subsp. sororia]1.1e-8482.2Show/hide
Query:  MGGCCCSTRNSHLNGTPAYYYCPLAIEERESSEIRSGSASMLLNAGHDLNLDFSIPNTYQSPPTPLPYDVVLKYPQQKDLNSVKETICGCSFK--SAMKS
        MGGCCCSTR S  +GTPAYYYCPL++EERESSEI  GSASMLL AGHDLNLD SIPNTY++PPTPLPYD  LK PQ KDLNS KET CGCSFK  SA+K 
Subjt:  MGGCCCSTRNSHLNGTPAYYYCPLAIEERESSEIRSGSASMLLNAGHDLNLDFSIPNTYQSPPTPLPYDVVLKYPQQKDLNSVKETICGCSFK--SAMKS

Query:  VGELDSKSQDSPLLGGPPRKLEHSKSKGNSTTTPVAEEEDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDKEMIFELP
        VGELD K QDSP LGGPPRKL+HSKSKGN T  PV EEEDVCPICLEEY S HPEIITKCKHHFHLACLLEWTERS+ACPICDKE IFELP
Subjt:  VGELDSKSQDSPLLGGPPRKLEHSKSKGNSTTTPVAEEEDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDKEMIFELP

XP_008438019.1 PREDICTED: E3 ubiquitin-protein ligase At3g02290 isoform X1 [Cucumis melo]1.6e-8883.33Show/hide
Query:  MGGCCCSTRNSHLNGTPAYYYCPLAIEERESSEIRSGSASMLLNAGHDLNLDFSIPNTYQSPPTPLPYDVVLKYPQQKDLNSVKETICGCSFK--SAMKS
        MGGCCCSTRNSH+NGTP YYYCP+A+EER +SEI SGS+SMLLNAGHDLNLDFSIPNTY+SPPTPLPYDVVLKYPQQKD NS KE ICGCS K  SA+KS
Subjt:  MGGCCCSTRNSHLNGTPAYYYCPLAIEERESSEIRSGSASMLLNAGHDLNLDFSIPNTYQSPPTPLPYDVVLKYPQQKDLNSVKETICGCSFK--SAMKS

Query:  VGELDSKSQDSPLLGGPPRKLEHSKSKGNSTTTPVAEE-EDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDK-------EMIFEL
        VGELD KSQDS    GPPRKLEHSKSKG STTTPV EE +DVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSD CPICDK       EMIFEL
Subjt:  VGELDSKSQDSPLLGGPPRKLEHSKSKGNSTTTPVAEE-EDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDK-------EMIFEL

XP_008438020.1 PREDICTED: E3 ubiquitin-protein ligase At3g02290 isoform X2 [Cucumis melo]1.3e-9086.39Show/hide
Query:  MGGCCCSTRNSHLNGTPAYYYCPLAIEERESSEIRSGSASMLLNAGHDLNLDFSIPNTYQSPPTPLPYDVVLKYPQQKDLNSVKETICGCSFK--SAMKS
        MGGCCCSTRNSH+NGTP YYYCP+A+EER +SEI SGS+SMLLNAGHDLNLDFSIPNTY+SPPTPLPYDVVLKYPQQKD NS KE ICGCS K  SA+KS
Subjt:  MGGCCCSTRNSHLNGTPAYYYCPLAIEERESSEIRSGSASMLLNAGHDLNLDFSIPNTYQSPPTPLPYDVVLKYPQQKDLNSVKETICGCSFK--SAMKS

Query:  VGELDSKSQDSPLLGGPPRKLEHSKSKGNSTTTPVAEE-EDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDKEMIFEL
        VGELD KSQDS    GPPRKLEHSKSKG STTTPV EE +DVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSD CPICDKEMIFEL
Subjt:  VGELDSKSQDSPLLGGPPRKLEHSKSKGNSTTTPVAEE-EDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDKEMIFEL

XP_022147277.1 probable E3 ubiquitin-protein ligase RHB1A [Momordica charantia]1.1e-8983.68Show/hide
Query:  MGGCCCSTRNSHLNGTPAYYYCPLAIEERESSEIRSGSASMLLNAGHDLNLDFSIPNTYQSPPTPLPYDVVLKYPQQKDLNSVKETICGCSFKS--AMKS
        MGGCCCSTR SH+NGTP YYYCPLA+EERESSEIRSGSASMLLNAGHD +LD SIPNTY++PPTPLPYD+V + PQ KD NS+KETICGCSFK+  A K 
Subjt:  MGGCCCSTRNSHLNGTPAYYYCPLAIEERESSEIRSGSASMLLNAGHDLNLDFSIPNTYQSPPTPLPYDVVLKYPQQKDLNSVKETICGCSFKS--AMKS

Query:  VGELDSKSQDSPLLGGPPRKLEHSKSKGNSTTTPVAEEEDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDKEMIFEL
        VGE D+KSQDSPLLGGPPRKLEHSK KGN+T T VAEEED CPICLEEYDS HPE ITKCKHHFHLACLLEWTERSDACPICD+EMIFEL
Subjt:  VGELDSKSQDSPLLGGPPRKLEHSKSKGNSTTTPVAEEEDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDKEMIFEL

XP_022980128.1 probable E3 ubiquitin-protein ligase RHB1A [Cucurbita maxima]3.5e-8883.77Show/hide
Query:  MGGCCCSTRNSHLNGTPAYYYCPLAIEERESSEIRSGSASMLLNAGHDLNLDFSIPNTYQSPPTPLPYDVVLKYPQQKDLNSVKETICGCSFK--SAMKS
        MGGCCCSTR SH +GTPAYYYCPL++EERESSEI  GSASMLL AGHDLNLD SIPNTY++PPTPLPYD  LK PQ KDLNS KET CGCSFK  SA+K 
Subjt:  MGGCCCSTRNSHLNGTPAYYYCPLAIEERESSEIRSGSASMLLNAGHDLNLDFSIPNTYQSPPTPLPYDVVLKYPQQKDLNSVKETICGCSFK--SAMKS

Query:  VGELDSKSQDSPLLGGPPRKLEHSKSKGNSTTTPVAEEEDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDKEMIFELP
        VGELD K QDSPLLGGPPRKL+HSKSKGN T TPV EEEDVCPICLEEY S HPEIITKCKHHFHLACLLEWTERS+ACPICDKE IFELP
Subjt:  VGELDSKSQDSPLLGGPPRKLEHSKSKGNSTTTPVAEEEDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDKEMIFELP

TrEMBL top hitse value%identityAlignment
A0A1S3AVH0 E3 ubiquitin-protein ligase At3g02290 isoform X26.2e-9186.39Show/hide
Query:  MGGCCCSTRNSHLNGTPAYYYCPLAIEERESSEIRSGSASMLLNAGHDLNLDFSIPNTYQSPPTPLPYDVVLKYPQQKDLNSVKETICGCSFK--SAMKS
        MGGCCCSTRNSH+NGTP YYYCP+A+EER +SEI SGS+SMLLNAGHDLNLDFSIPNTY+SPPTPLPYDVVLKYPQQKD NS KE ICGCS K  SA+KS
Subjt:  MGGCCCSTRNSHLNGTPAYYYCPLAIEERESSEIRSGSASMLLNAGHDLNLDFSIPNTYQSPPTPLPYDVVLKYPQQKDLNSVKETICGCSFK--SAMKS

Query:  VGELDSKSQDSPLLGGPPRKLEHSKSKGNSTTTPVAEE-EDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDKEMIFEL
        VGELD KSQDS    GPPRKLEHSKSKG STTTPV EE +DVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSD CPICDKEMIFEL
Subjt:  VGELDSKSQDSPLLGGPPRKLEHSKSKGNSTTTPVAEE-EDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDKEMIFEL

A0A1S4DSJ0 E3 ubiquitin-protein ligase At3g02290 isoform X17.6e-8983.33Show/hide
Query:  MGGCCCSTRNSHLNGTPAYYYCPLAIEERESSEIRSGSASMLLNAGHDLNLDFSIPNTYQSPPTPLPYDVVLKYPQQKDLNSVKETICGCSFK--SAMKS
        MGGCCCSTRNSH+NGTP YYYCP+A+EER +SEI SGS+SMLLNAGHDLNLDFSIPNTY+SPPTPLPYDVVLKYPQQKD NS KE ICGCS K  SA+KS
Subjt:  MGGCCCSTRNSHLNGTPAYYYCPLAIEERESSEIRSGSASMLLNAGHDLNLDFSIPNTYQSPPTPLPYDVVLKYPQQKDLNSVKETICGCSFK--SAMKS

Query:  VGELDSKSQDSPLLGGPPRKLEHSKSKGNSTTTPVAEE-EDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDK-------EMIFEL
        VGELD KSQDS    GPPRKLEHSKSKG STTTPV EE +DVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSD CPICDK       EMIFEL
Subjt:  VGELDSKSQDSPLLGGPPRKLEHSKSKGNSTTTPVAEE-EDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDK-------EMIFEL

A0A6J1D1Y3 probable E3 ubiquitin-protein ligase RHB1A5.3e-9083.68Show/hide
Query:  MGGCCCSTRNSHLNGTPAYYYCPLAIEERESSEIRSGSASMLLNAGHDLNLDFSIPNTYQSPPTPLPYDVVLKYPQQKDLNSVKETICGCSFKS--AMKS
        MGGCCCSTR SH+NGTP YYYCPLA+EERESSEIRSGSASMLLNAGHD +LD SIPNTY++PPTPLPYD+V + PQ KD NS+KETICGCSFK+  A K 
Subjt:  MGGCCCSTRNSHLNGTPAYYYCPLAIEERESSEIRSGSASMLLNAGHDLNLDFSIPNTYQSPPTPLPYDVVLKYPQQKDLNSVKETICGCSFKS--AMKS

Query:  VGELDSKSQDSPLLGGPPRKLEHSKSKGNSTTTPVAEEEDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDKEMIFEL
        VGE D+KSQDSPLLGGPPRKLEHSK KGN+T T VAEEED CPICLEEYDS HPE ITKCKHHFHLACLLEWTERSDACPICD+EMIFEL
Subjt:  VGELDSKSQDSPLLGGPPRKLEHSKSKGNSTTTPVAEEEDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDKEMIFEL

A0A6J1E9L1 probable E3 ubiquitin-protein ligase RHB1A5.1e-8581.68Show/hide
Query:  MGGCCCSTRNSHLNGTPAYYYCPLAIEERESSEIRSGSASMLLNAGHDLNLDFSIPNTYQSPPTPLPYDVVLKYPQQKDLNSVKETICGCSFK--SAMKS
        MGGCCCSTR S  +GTPAYYYCPL++EERESSEI  GS SML+ AGHDLNLD SIPNTY++PPTPLPYD  LK PQ KDLNS KET CGCSFK  SA+K 
Subjt:  MGGCCCSTRNSHLNGTPAYYYCPLAIEERESSEIRSGSASMLLNAGHDLNLDFSIPNTYQSPPTPLPYDVVLKYPQQKDLNSVKETICGCSFK--SAMKS

Query:  VGELDSKSQDSPLLGGPPRKLEHSKSKGNSTTTPVAEEEDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDKEMIFELP
        VGELD K QDSPLLGGPPRKL+HSKSKGN T +PV EEEDVCPICLEEY S HPEIITKCKHHFHLACLLEWTERS+ACPICDKE IFELP
Subjt:  VGELDSKSQDSPLLGGPPRKLEHSKSKGNSTTTPVAEEEDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDKEMIFELP

A0A6J1IYD3 probable E3 ubiquitin-protein ligase RHB1A1.7e-8883.77Show/hide
Query:  MGGCCCSTRNSHLNGTPAYYYCPLAIEERESSEIRSGSASMLLNAGHDLNLDFSIPNTYQSPPTPLPYDVVLKYPQQKDLNSVKETICGCSFK--SAMKS
        MGGCCCSTR SH +GTPAYYYCPL++EERESSEI  GSASMLL AGHDLNLD SIPNTY++PPTPLPYD  LK PQ KDLNS KET CGCSFK  SA+K 
Subjt:  MGGCCCSTRNSHLNGTPAYYYCPLAIEERESSEIRSGSASMLLNAGHDLNLDFSIPNTYQSPPTPLPYDVVLKYPQQKDLNSVKETICGCSFK--SAMKS

Query:  VGELDSKSQDSPLLGGPPRKLEHSKSKGNSTTTPVAEEEDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDKEMIFELP
        VGELD K QDSPLLGGPPRKL+HSKSKGN T TPV EEEDVCPICLEEY S HPEIITKCKHHFHLACLLEWTERS+ACPICDKE IFELP
Subjt:  VGELDSKSQDSPLLGGPPRKLEHSKSKGNSTTTPVAEEEDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDKEMIFELP

SwissProt top hitse value%identityAlignment
Q2HIJ8 Probable E3 ubiquitin-protein ligase RHB1A6.1e-4348.95Show/hide
Query:  MGGCCCSTRNSHLNGTPAYYYCPLAIEERESSEIRSGSASMLLNA-GHDLNLDFSIPNTYQSPPTPLPYDVVLKYPQQKDLNSVKETICGCSFK--SAMK
        MGGCC S+R SHL GTP YYYCP + EE   S  R+G  S        D+ L+ SIP+T+   P PLPYD++L  PQ  D  S+K  + G SF+  +  +
Subjt:  MGGCCCSTRNSHLNGTPAYYYCPLAIEERESSEIRSGSASMLLNA-GHDLNLDFSIPNTYQSPPTPLPYDVVLKYPQQKDLNSVKETICGCSFK--SAMK

Query:  SVGELDSKSQDSPLLGGPPRKLEHSKSKGNSTTTPVAEEEDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDKEMIFE
         +GE D K+  S ++   PRK + SK +G      V EEED CPIC E+YD  +P + TKC+H FHL+CLLEW ERSD CPICDKE++F+
Subjt:  SVGELDSKSQDSPLLGGPPRKLEHSKSKGNSTTTPVAEEEDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDKEMIFE

Q4TU14 E3 ubiquitin-protein ligase RHF1A5.7e-0934.48Show/hide
Query:  SVGELDSKSQDSPLLGGPPRKLEHSKSKGNSTTTPVAEE----EDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPIC
        S   L   S  +P +G        S S  +S     +++    +D C ICLE +    P  +T CKH +HL C++EW++RS  CPIC
Subjt:  SVGELDSKSQDSPLLGGPPRKLEHSKSKGNSTTTPVAEE----EDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPIC

Q8LE94 E3 ubiquitin-protein ligase At3g022903.2e-2032.8Show/hide
Query:  EERESSEIRSGSASMLLNAGHDLNLDFSIPNTYQSPPTPLPYDVVLKY--------------------PQQKDLNSVKET--ICGCSFKSAMKSVGELDS
        E R        +AS+  ++ HD  L       ++S P PLPYD   +Y                    P + D ++  E+  + GC + +   ++ + DS
Subjt:  EERESSEIRSGSASMLLNAGHDLNLDFSIPNTYQSPPTPLPYDVVLKY--------------------PQQKDLNSVKET--ICGCSFKSAMKSVGELDS

Query:  KSQDSPLLGGPPRKLEHSKSKG----NSTTTPVAEEEDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDKEMIF
        K + S        ++  S+SK     +     ++E+EDVCP CLEEY S +P+I+TKC HHFHL+C+ EW ERS+ CP+C K M F
Subjt:  KSQDSPLLGGPPRKLEHSKSKG----NSTTTPVAEEEDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDKEMIF

Q93ZF6 E3 ubiquitin-protein ligase AIRP13.1e-1562.75Show/hide
Query:  EEEDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDKEMI
        E  D CPICLEEY+  +P+++TKC H FHLAC+L W ERS+ACP+CDKE++
Subjt:  EEEDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDKEMI

Q9ZT42 E3 ubiquitin-protein ligase RHF2A7.5e-0939.71Show/hide
Query:  EHSKSKGNSTTTPVAEE-------EDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPIC
        E + S+G+ T+     E       +D C ICLE +    P  +T CKH +HL C+LEW +RS  CP+C
Subjt:  EHSKSKGNSTTTPVAEE-------EDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPIC

Arabidopsis top hitse value%identityAlignment
AT4G00335.1 RING-H2 finger B1A4.3e-4448.95Show/hide
Query:  MGGCCCSTRNSHLNGTPAYYYCPLAIEERESSEIRSGSASMLLNA-GHDLNLDFSIPNTYQSPPTPLPYDVVLKYPQQKDLNSVKETICGCSFK--SAMK
        MGGCC S+R SHL GTP YYYCP + EE   S  R+G  S        D+ L+ SIP+T+   P PLPYD++L  PQ  D  S+K  + G SF+  +  +
Subjt:  MGGCCCSTRNSHLNGTPAYYYCPLAIEERESSEIRSGSASMLLNA-GHDLNLDFSIPNTYQSPPTPLPYDVVLKYPQQKDLNSVKETICGCSFK--SAMK

Query:  SVGELDSKSQDSPLLGGPPRKLEHSKSKGNSTTTPVAEEEDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDKEMIFE
         +GE D K+  S ++   PRK + SK +G      V EEED CPIC E+YD  +P + TKC+H FHL+CLLEW ERSD CPICDKE++F+
Subjt:  SVGELDSKSQDSPLLGGPPRKLEHSKSKGNSTTTPVAEEEDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDKEMIFE

AT4G00335.2 RING-H2 finger B1A4.3e-4448.95Show/hide
Query:  MGGCCCSTRNSHLNGTPAYYYCPLAIEERESSEIRSGSASMLLNA-GHDLNLDFSIPNTYQSPPTPLPYDVVLKYPQQKDLNSVKETICGCSFK--SAMK
        MGGCC S+R SHL GTP YYYCP + EE   S  R+G  S        D+ L+ SIP+T+   P PLPYD++L  PQ  D  S+K  + G SF+  +  +
Subjt:  MGGCCCSTRNSHLNGTPAYYYCPLAIEERESSEIRSGSASMLLNA-GHDLNLDFSIPNTYQSPPTPLPYDVVLKYPQQKDLNSVKETICGCSFK--SAMK

Query:  SVGELDSKSQDSPLLGGPPRKLEHSKSKGNSTTTPVAEEEDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDKEMIFE
         +GE D K+  S ++   PRK + SK +G      V EEED CPIC E+YD  +P + TKC+H FHL+CLLEW ERSD CPICDKE++F+
Subjt:  SVGELDSKSQDSPLLGGPPRKLEHSKSKGNSTTTPVAEEEDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDKEMIFE

AT4G00335.3 RING-H2 finger B1A4.0e-4249.19Show/hide
Query:  MGGCCCSTRNSHLNGTPAYYYCPLAIEERESSEIRSGSASMLLNA-GHDLNLDFSIPNTYQSPPTPLPYDVVLKYPQQKDLNSVKETICGCSFK--SAMK
        MGGCC S+R SHL GTP YYYCP + EE   S  R+G  S        D+ L+ SIP+T+   P PLPYD++L  PQ  D  S+K  + G SF+  +  +
Subjt:  MGGCCCSTRNSHLNGTPAYYYCPLAIEERESSEIRSGSASMLLNA-GHDLNLDFSIPNTYQSPPTPLPYDVVLKYPQQKDLNSVKETICGCSFK--SAMK

Query:  SVGELDSKSQDSPLLGGPPRKLEHSKSKGNSTTTPVAEEEDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDK
         +GE D K+  S ++   PRK + SK +G      V EEED CPIC E+YD  +P + TKC+H FHL+CLLEW ERSD CPICDK
Subjt:  SVGELDSKSQDSPLLGGPPRKLEHSKSKGNSTTTPVAEEEDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDK

AT5G15790.1 RING/U-box superfamily protein1.8e-2132.78Show/hide
Query:  ESSEIRSGSASMLLNAGHDLNLDFSIPNTYQSPPTPLPYDVVLKYPQQKDLNSVKETICGCSFK----SAMKSVGELDSKS--------QDSPLLGGPPR
        E+  + S   +  ++     + D  + NT+ S P PLPYD   +Y + +  + V     G S        ++S  ++DS+S         +  ++ G   
Subjt:  ESSEIRSGSASMLLNAGHDLNLDFSIPNTYQSPPTPLPYDVVLKYPQQKDLNSVKETICGCSFK----SAMKSVGELDSKS--------QDSPLLGGPPR

Query:  KLEHSKSK-----------GNSTTTPVAEEEDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDKEMIF
        K E S+S             N      +++EDVCP CLEEY S +P+I+TKC HHFHL+C+ EW ERS+ CP+C K M F
Subjt:  KLEHSKSK-----------GNSTTTPVAEEEDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDKEMIF

AT5G41350.1 RING/U-box superfamily protein6.9e-3440.57Show/hide
Query:  MGGCCC--STRNSHLNGTPAYYYCPLAIEER---ESSEIRSGSASMLLNAGHDLNLDFSIPNTYQSPPTPLPYDVVLKYPQ-------------------
        MGGCCC  S+R + ++  PAYYY P A EER    S+  R+ SA        D NL+ S P+ Y  PP P P+DV +  PQ                   
Subjt:  MGGCCC--STRNSHLNGTPAYYYCPLAIEER---ESSEIRSGSASMLLNAGHDLNLDFSIPNTYQSPPTPLPYDVVLKYPQ-------------------

Query:  QKDLNSVKETICGCSF-KSAMKSVGELDSKSQDSPLLGGPPRKLEHSKSKGNSTTTPVAEEEDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSD
          +  S +ET+ G +       S  E DSK Q    L     +++   SK  +   P+ EEED CPICLEEYD  +P+++ KC HHFHLAC+LEW ERS+
Subjt:  QKDLNSVKETICGCSF-KSAMKSVGELDSKSQDSPLLGGPPRKLEHSKSKGNSTTTPVAEEEDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSD

Query:  ACPICDKEMIFE
         CP+C+KEM+F+
Subjt:  ACPICDKEMIFE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACTTGCCAATTTGGTTTTCCACATTGATGAAACAGAATTGTGTTTTTGATCTTCAAGATGTAGACTGGTTTCCCTATCTCCTCTCTTGGGGAAGAATTTTCAGATG
CATATCTTACAATGTTCAATGGATTGTGTCTCAGTTTTTCTATCTTTGCATCTGTGTGTTTGCTGTCAATCTGTATCGGTTCTTCGTCCTTTTTCGTCCGTTCTCAATGC
CTAATGTACAATACATTATGCCAGATAACAGGAAACCATGTTCTAACAGCTGTGGGTTAGATCAGAGGAATCATCAAAGAATGGGAGGCTGCTGCTGTTCGACTCGAAAT
TCTCACCTGAATGGAACTCCAGCATACTACTATTGCCCCCTGGCTATTGAGGAGCGCGAGTCATCTGAAATTCGTAGTGGCTCAGCCTCGATGCTCCTGAATGCAGGACA
TGATTTGAACCTGGATTTTTCGATACCGAACACTTACCAATCCCCTCCCACACCTCTCCCGTATGATGTGGTTTTGAAATATCCACAACAGAAAGATCTTAACTCTGTTA
AAGAAACAATCTGTGGATGTAGTTTTAAATCAGCAATGAAGAGTGTTGGGGAACTGGATAGTAAGTCCCAAGACAGCCCTTTGCTTGGTGGCCCTCCACGGAAACTGGAA
CATTCCAAGTCGAAGGGCAATAGTACAACGACTCCGGTCGCCGAAGAAGAGGATGTCTGTCCCATTTGTCTTGAAGAGTATGATTCTGTCCATCCAGAAATTATCACAAA
ATGCAAGCACCACTTTCACCTCGCTTGCCTTCTTGAGTGGACCGAAAGAAGTGATGCTTGTCCCATCTGCGACAAGGAGATGATATTTGAGCTACCTTGA
mRNA sequenceShow/hide mRNA sequence
ATTTCTTTGTTCTTCATCAAATCGTTTTTCTAATTCATTTTGAGCTTTTGGGTTTCTGTTAATGTTGTTGCTGATGGTTCTGTGATCTGGGTTTGGCTTGTTTTGTTGAT
TAGTGGATTTAATTTCTTCACCGTTTTCTTGATTGGAGCTGATTCTGTGTTTATGTCATGAAATTGTGAATGATCAAATGATTTTTGTTTTCTTTGGCGGGTTTTAAGTA
ACTGGGGATTAGAGAAAAAAATTGGGTGGATTTAAGATATTTGCTGGACATTTAAAAAATGTAAATGGCTCATTCATTCATTGGTTCTAACTTTTGTTAAATGTATTTTT
AATGGCTACCTTTGAAACATTCTGTCTGTTCATTAGAAAGAAAGATTGAGATGCTTCTCTATGTTCTTTTCTATCTTGTTAGTCAGTGGAAAACTGACTTCTCAACGCCT
TGTTTGTTTTCATTCATTTATTTTACCAAATCAGAGTCTTAATGGAGACAATATTTATGCATATGTTATAACTCAGCCGATAAAGTCAAGTTGATTTGAAATACTTTTGC
ATCCAATCTATATGTTCATTATGAGCCATTCAGTTGTTATTTGCAGTATGGTTTGTGTTTGGCTCAAAATTGTAAGTCTAGTTGATTTGAGTTAACTGGATGAAGCTTAA
ATCCTGCTGTCTCCACCTATATCCTTAATGAAAGATAGAAAGAAGACGGTACCTAATTGGGTTCATTACACGTGATGCTAATGTAGTTGGTTGTTACGTGCAATTAGGCT
CTCTGATTGTGAAGTCTAGTTGATTTGAGGTATTCATCTGTGGTTTATACGTCACCATATCGCCTCGTTTATATCCTTTGATTTTGGGCCATGCTGAGTTATATGGTGGT
CATGTACAGTATTGTGGTTGTTTTTAGAAACTTGAGTCGTGAGAATTAGTGTTGTTCGTTAGCCAGACATTTTGGAAGGCATAATCATAGTCATGTTAGAGGAAGATCAC
CCCTTTTTGGTGCTTTAGTTTTTACTTTTTAGAACATGCACTTGCCAATTTGGTTTTCCACATTGATGAAACAGAATTGTGTTTTTGATCTTCAAGATGTAGACTGGTTT
CCCTATCTCCTCTCTTGGGGAAGAATTTTCAGATGCATATCTTACAATGTTCAATGGATTGTGTCTCAGTTTTTCTATCTTTGCATCTGTGTGTTTGCTGTCAATCTGTA
TCGGTTCTTCGTCCTTTTTCGTCCGTTCTCAATGCCTAATGTACAATACATTATGCCAGATAACAGGAAACCATGTTCTAACAGCTGTGGGTTAGATCAGAGGAATCATC
AAAGAATGGGAGGCTGCTGCTGTTCGACTCGAAATTCTCACCTGAATGGAACTCCAGCATACTACTATTGCCCCCTGGCTATTGAGGAGCGCGAGTCATCTGAAATTCGT
AGTGGCTCAGCCTCGATGCTCCTGAATGCAGGACATGATTTGAACCTGGATTTTTCGATACCGAACACTTACCAATCCCCTCCCACACCTCTCCCGTATGATGTGGTTTT
GAAATATCCACAACAGAAAGATCTTAACTCTGTTAAAGAAACAATCTGTGGATGTAGTTTTAAATCAGCAATGAAGAGTGTTGGGGAACTGGATAGTAAGTCCCAAGACA
GCCCTTTGCTTGGTGGCCCTCCACGGAAACTGGAACATTCCAAGTCGAAGGGCAATAGTACAACGACTCCGGTCGCCGAAGAAGAGGATGTCTGTCCCATTTGTCTTGAA
GAGTATGATTCTGTCCATCCAGAAATTATCACAAAATGCAAGCACCACTTTCACCTCGCTTGCCTTCTTGAGTGGACCGAAAGAAGTGATGCTTGTCCCATCTGCGACAA
GGAGATGATATTTGAGCTACCTTGAGCCTGCAGAAATGAGAAACTTCTCTAGTCCTTGAAATTCAAGCTTGAGCTCAGTTCACCCCTGGTGGATGGTGCTATTCCTCGTT
CAACCACAGGTTCGTTTTCAAAACTATGGCTGTATAGATACGTTGGTCGTTTCGTAGCTGCAAATTCGAGATGTAAATTGTTGTCGTCAGTCGATTCGATACATCTGCCG
AGGAAGAAATATTACTCTCATACAACAGTGCTTCCCTTCCTCATGTGGGATCTTCATGCATATTCATTATTTTTTCAATCTTTGATCTTGATCATCAATTCTGAAGGAAC
TCCTCCTGGCTTATAGATTCAAAAAAAGAGTATTAAAGATTCATATATTCTCTGTAAGATGAGATATCTTTTTCATTTTGGCTCTGAAAATCTTGCCTGTAAATGTTTCT
CAAATCTTATCTCTAGCTTTATGATGTCTCCAGCTTTGTGCAGTTTTTAGATAGTTTAAGAAATAATATGTCAAAAAGTTTAAATACACCACATACTTTGAATGTGAGAT
TCTGATAATTGTAGTTAATAGATCAAAATTGAAGTCT
Protein sequenceShow/hide protein sequence
MHLPIWFSTLMKQNCVFDLQDVDWFPYLLSWGRIFRCISYNVQWIVSQFFYLCICVFAVNLYRFFVLFRPFSMPNVQYIMPDNRKPCSNSCGLDQRNHQRMGGCCCSTRN
SHLNGTPAYYYCPLAIEERESSEIRSGSASMLLNAGHDLNLDFSIPNTYQSPPTPLPYDVVLKYPQQKDLNSVKETICGCSFKSAMKSVGELDSKSQDSPLLGGPPRKLE
HSKSKGNSTTTPVAEEEDVCPICLEEYDSVHPEIITKCKHHFHLACLLEWTERSDACPICDKEMIFELP