CuGenDBv2

Gene ID	Lsi05G021170
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Cyclic nucleotide-gated ion channel 1-like
Genome location	chr05:28049235..28050659
RNA-Seq Expression	Lsi05G021170
Synteny	Lsi05G021170
Gene Ontology terms	GO:0034220 - ion transmembrane transport (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0005216 - ion channel activity (molecular function)
InterPro domains	IPR000595 - Cyclic nucleotide-binding domain IPR014710 - RmlC-like jelly roll fold IPR018490 - Cyclic nucleotide-binding-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0048895.1 cyclic nucleotide-gated ion channel 1 [Cucumis melo var. makuwa]

2.8e-49

56.65

Show/hide

Query:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM
        M  R +P +LR  IR+YDQYKWQ+NRGVKEEELI+ LP DL RDIKR L    CLA LKKVPLFSS+  +LLD M  YL+PVLFTE S ++QEG+P+  M
Subjt:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM

Query:  VFIMKGRLDATGFMD-ITTTNTVVLKAGDFYGEEIIPWAM--ADRLISLPISTRRIKSQTKVEAFALEANQLRSVVSFTLNHGESGRPLKYKKLGLTTVK
        +FIMKG+L      D      +  L AGDF GEE++ WAM       SLPIS R +++ T+VEAFAL+AN+L+ V S TL +G  G+P KYKKLG    K
Subjt:  VFIMKGRLDATGFMD-ITTTNTVVLKAGDFYGEEIIPWAM--ADRLISLPISTRRIKSQTKVEAFALEANQLRSVVSFTLNHGESGRPLKYKKLGLTTVK

Query:  ESR
        ESR
Subjt:  ESR

KAA0048897.1 cyclic nucleotide-gated ion channel 1-like [Cucumis melo var. makuwa]

4.1e-45

54.85

Show/hide

Query:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM
        M  R +P++LR+ IR+YDQYKWQ+NRGVKEEELI  LP DL RDIK+ L    CLA+LKKVPLFS +  +LLD M  YLKPVLFT+ S +LQEG+ +  M
Subjt:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM

Query:  VFIMKGRL---DATGFMDITTTNTVVLKAGDFYGEEIIPWAMADRLISLPISTRRIKSQTKVEAFALEANQLRSVVSFTLNHGESGRPLKYKKLGLTTVK
        +FIMKG L      G+ +     T  LKAGDF GEE++ WAM      LPIS R IK+ T+VEAFAL  +         L +GE G+P KYKKLG  TVK
Subjt:  VFIMKGRL---DATGFMDITTTNTVVLKAGDFYGEEIIPWAMADRLISLPISTRRIKSQTKVEAFALEANQLRSVVSFTLNHGESGRPLKYKKLGLTTVK

Query:  ESRRQV
        ES  +V
Subjt:  ESRRQV

TYK20846.1 cyclic nucleotide-gated ion channel 1-like [Cucumis melo var. makuwa]

1.0e-59

66.15

Show/hide

Query:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM
        M QR +PK LRR IRQ+D+YKWQ+NRGVKEEE++N+LPI+L RDIK LL  DACL NLKKVPLFS+I DRLLD+MHG LKPVLFTEDSI+L E +P+  M
Subjt:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM

Query:  VFIMKGRLDATGFMDIT---TTNTVVLKAGDFYGEEIIPWAMADRLISLPISTRRIKSQTKVEAFALEANQLRSVVS-FTLNHGESGRPLKY
        VFI+KG+L AT   +I+   + + VVL+AGDFYGEE+IPWAMA+ +   PIST  IKS TKVEAFALEANQLRSVVS F   H  S + L++
Subjt:  VFIMKGRLDATGFMDIT---TTNTVVLKAGDFYGEEIIPWAMADRLISLPISTRRIKSQTKVEAFALEANQLRSVVS-FTLNHGESGRPLKY

XP_008437904.1 PREDICTED: cyclic nucleotide-gated ion channel 1-like [Cucumis melo]

2.5e-50

66.25

Show/hide

Query:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM
        M QR +PK LRR IRQ+D+YKWQ+NRGVKEEE++N+LPI+L RDIK LL  DACL NLKKVPLFS+I DRLLD+MHG LKPVLFTEDSI+L E +P+  M
Subjt:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM

Query:  VFIMKGRLDATGFMDIT---TTNTVVLKAGDFYGEEIIPWAMADRLISLPISTRRIKSQT
        VFI+KG+L AT   +I+   + + VVL+AGDFYGEE+IPWAMA+ +   PIST  IKS T
Subjt:  VFIMKGRLDATGFMDIT---TTNTVVLKAGDFYGEEIIPWAMADRLISLPISTRRIKSQT

XP_022147438.1 cyclic nucleotide-gated ion channel 1-like [Momordica charantia]

8.3e-46

61.02

Show/hide

Query:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM
        M  R +P+ LR+ IR+YDQYKWQ+NRGV EEELI+ LP DL RDIKR L    CLA LKKVPLFSS+  +LLD M  YLKPVLFTE S +LQEG+PV  M
Subjt:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM

Query:  VFIMKGRLDAT---GFMDITTTNTVVLKAGDFYGEEIIPWAMADRLISLPISTRRIKSQTKVEAFALEANQLRSVVS
        +FIMKG L      G+ +   +++ VLKAGDF GEE++PWAM  +  SLPISTR +K+ T+VEAFAL+A +L+SVVS
Subjt:  VFIMKGRLDAT---GFMDITTTNTVVLKAGDFYGEEIIPWAMADRLISLPISTRRIKSQTKVEAFALEANQLRSVVS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AVP7 cyclic nucleotide-gated ion channel 1-like

1.2e-50

66.25

Show/hide

Query:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM
        M QR +PK LRR IRQ+D+YKWQ+NRGVKEEE++N+LPI+L RDIK LL  DACL NLKKVPLFS+I DRLLD+MHG LKPVLFTEDSI+L E +P+  M
Subjt:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM

Query:  VFIMKGRLDATGFMDIT---TTNTVVLKAGDFYGEEIIPWAMADRLISLPISTRRIKSQT
        VFI+KG+L AT   +I+   + + VVL+AGDFYGEE+IPWAMA+ +   PIST  IKS T
Subjt:  VFIMKGRLDATGFMDIT---TTNTVVLKAGDFYGEEIIPWAMADRLISLPISTRRIKSQT

A0A5A7U3M6 Cyclic nucleotide-gated ion channel 1-like

2.0e-45

54.85

Show/hide

Query:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM
        M  R +P++LR+ IR+YDQYKWQ+NRGVKEEELI  LP DL RDIK+ L    CLA+LKKVPLFS +  +LLD M  YLKPVLFT+ S +LQEG+ +  M
Subjt:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM

Query:  VFIMKGRL---DATGFMDITTTNTVVLKAGDFYGEEIIPWAMADRLISLPISTRRIKSQTKVEAFALEANQLRSVVSFTLNHGESGRPLKYKKLGLTTVK
        +FIMKG L      G+ +     T  LKAGDF GEE++ WAM      LPIS R IK+ T+VEAFAL  +         L +GE G+P KYKKLG  TVK
Subjt:  VFIMKGRL---DATGFMDITTTNTVVLKAGDFYGEEIIPWAMADRLISLPISTRRIKSQTKVEAFALEANQLRSVVSFTLNHGESGRPLKYKKLGLTTVK

Query:  ESRRQV
        ES  +V
Subjt:  ESRRQV

A0A5A7U5I7 Cyclic nucleotide-gated ion channel 1

1.3e-49

56.65

Show/hide

Query:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM
        M  R +P +LR  IR+YDQYKWQ+NRGVKEEELI+ LP DL RDIKR L    CLA LKKVPLFSS+  +LLD M  YL+PVLFTE S ++QEG+P+  M
Subjt:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM

Query:  VFIMKGRLDATGFMD-ITTTNTVVLKAGDFYGEEIIPWAM--ADRLISLPISTRRIKSQTKVEAFALEANQLRSVVSFTLNHGESGRPLKYKKLGLTTVK
        +FIMKG+L      D      +  L AGDF GEE++ WAM       SLPIS R +++ T+VEAFAL+AN+L+ V S TL +G  G+P KYKKLG    K
Subjt:  VFIMKGRLDATGFMD-ITTTNTVVLKAGDFYGEEIIPWAM--ADRLISLPISTRRIKSQTKVEAFALEANQLRSVVSFTLNHGESGRPLKYKKLGLTTVK

Query:  ESR
        ESR
Subjt:  ESR

A0A5D3DBC3 Cyclic nucleotide-gated ion channel 1-like

4.9e-60

66.15

Show/hide

Query:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM
        M QR +PK LRR IRQ+D+YKWQ+NRGVKEEE++N+LPI+L RDIK LL  DACL NLKKVPLFS+I DRLLD+MHG LKPVLFTEDSI+L E +P+  M
Subjt:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM

Query:  VFIMKGRLDATGFMDIT---TTNTVVLKAGDFYGEEIIPWAMADRLISLPISTRRIKSQTKVEAFALEANQLRSVVS-FTLNHGESGRPLKY
        VFI+KG+L AT   +I+   + + VVL+AGDFYGEE+IPWAMA+ +   PIST  IKS TKVEAFALEANQLRSVVS F   H  S + L++
Subjt:  VFIMKGRLDATGFMDIT---TTNTVVLKAGDFYGEEIIPWAMADRLISLPISTRRIKSQTKVEAFALEANQLRSVVS-FTLNHGESGRPLKY

A0A6J1D1B4 cyclic nucleotide-gated ion channel 1-like

4.0e-46

61.02

Show/hide

Query:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM
        M  R +P+ LR+ IR+YDQYKWQ+NRGV EEELI+ LP DL RDIKR L    CLA LKKVPLFSS+  +LLD M  YLKPVLFTE S +LQEG+PV  M
Subjt:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM

Query:  VFIMKGRLDAT---GFMDITTTNTVVLKAGDFYGEEIIPWAMADRLISLPISTRRIKSQTKVEAFALEANQLRSVVS
        +FIMKG L      G+ +   +++ VLKAGDF GEE++PWAM  +  SLPISTR +K+ T+VEAFAL+A +L+SVVS
Subjt:  VFIMKGRLDAT---GFMDITTTNTVVLKAGDFYGEEIIPWAMADRLISLPISTRRIKSQTKVEAFALEANQLRSVVS

SwissProt top hits

e value

%identity

Alignment

O65717 Cyclic nucleotide-gated ion channel 1

7.3e-37

47.8

Show/hide

Query:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM
        M+ R +P+ LR+ IR+Y+QYKWQ  RGV EE L++ LP DL RDIKR L    CLA L +VP+F  + ++LLD +   L+PVL+TE+S +++EG+PV  M
Subjt:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM

Query:  VFIMKGRL-------DATGFMDITTTNTVVLKAGDFYGEEIIPWAMADRLIS-LPISTRRIKSQTKVEAFALEANQLRSVVS
        +FIM+G+L         TGF+     N+  L AGDF GEE++ WA+     S LPISTR +++  +VEAFAL+A+ L+ V S
Subjt:  VFIMKGRL-------DATGFMDITTTNTVVLKAGDFYGEEIIPWAMADRLIS-LPISTRRIKSQTKVEAFALEANQLRSVVS

Q8RWS9 Probable cyclic nucleotide-gated ion channel 5

8.1e-36

46.7

Show/hide

Query:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM
        M  R +P+ LR  +R+YDQYKW   RGV EE L+  LP DL RDIKR L    CLA +++VPLF S+ D+LLD +   LKP LFTE + +++EG+PV  M
Subjt:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM

Query:  VFIMKGRLDA-------TGFMDITTTNTVVLKAGDFYGEEIIPWAMADRL-ISLPISTRRIKSQTKVEAFALEANQLRSVVS
        +FI++GRL++       +GF      N  +LK G+F GEE++ WA+  +  ++LP STR +K+ T+VEAFAL + +L+ V S
Subjt:  VFIMKGRLDA-------TGFMDITTTNTVVLKAGDFYGEEIIPWAMADRL-ISLPISTRRIKSQTKVEAFALEANQLRSVVS

Q9LD40 Putative cyclic nucleotide-gated ion channel 13

5.6e-37

48.9

Show/hide

Query:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM
        M+ R +P  LR+ IR+Y+QYKWQ  RGV+EE L+  LP DL RDIKR  HF  CL  LKKVPLF  + ++LLD +   LKPVL+TE+S  ++EG+PV  M
Subjt:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM

Query:  VFIMKGRL-------DATGFMDITTTNTVVLKAGDFYGEEIIPWAMADRLIS-LPISTRRIKSQTKVEAFALEANQLRSVVS
        +F+M+G+L         TGF      N V LK  DF GE+++ WA+  +  S  PISTR +++ T+VEAFAL A+ L+ V S
Subjt:  VFIMKGRL-------DATGFMDITTTNTVVLKAGDFYGEEIIPWAMADRLIS-LPISTRRIKSQTKVEAFALEANQLRSVVS

Q9LNJ0 Probable cyclic nucleotide-gated ion channel 10

3.9e-38

49.45

Show/hide

Query:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM
        M+ R +P+ LR+ IR+Y+QY+WQ  RGV+EE L+  LP DL RDIKR L    CL  LKKVPLF  + ++LLD +   L+PVL+TE+S V++EG+PV  M
Subjt:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM

Query:  VFIMKGRL-------DATGFMDITTTNTVVLKAGDFYGEEIIPWAMADRLIS-LPISTRRIKSQTKVEAFALEANQLRSVVS
        +F+M+GRL         +GF      N V LKA DF GE+++PWA+  +  S  PISTR +++ T+VEAFAL A  L+SV S
Subjt:  VFIMKGRL-------DATGFMDITTTNTVVLKAGDFYGEEIIPWAMADRLIS-LPISTRRIKSQTKVEAFALEANQLRSVVS

Q9S9N5 Putative cyclic nucleotide-gated ion channel 7

3.6e-36

47.25

Show/hide

Query:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM
        M  R +P+ LR  +R+YDQYKW   RGV EE ++  LP DL RDIKR L    CL  +++VPLF+++ +RLLD +   LKP LFTE + +++EG+PV  M
Subjt:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM

Query:  VFIMKGRLDA-------TGFMDITTTNTVVLKAGDFYGEEIIPWAMADRLIS-LPISTRRIKSQTKVEAFALEANQLRSVVS
        +FI++GRL++       +GF      N  +LK GDF GEE++ WA+  +  S LP STR +K+ T+VEAFALEA +L+ V S
Subjt:  VFIMKGRLDA-------TGFMDITTTNTVVLKAGDFYGEEIIPWAMADRLIS-LPISTRRIKSQTKVEAFALEANQLRSVVS

Arabidopsis top hits

e value

%identity

Alignment

AT1G01340.1 cyclic nucleotide gated channel 10

2.8e-39

49.45

Show/hide

Query:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM
        M+ R +P+ LR+ IR+Y+QY+WQ  RGV+EE L+  LP DL RDIKR L    CL  LKKVPLF  + ++LLD +   L+PVL+TE+S V++EG+PV  M
Subjt:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM

Query:  VFIMKGRL-------DATGFMDITTTNTVVLKAGDFYGEEIIPWAMADRLIS-LPISTRRIKSQTKVEAFALEANQLRSVVS
        +F+M+GRL         +GF      N V LKA DF GE+++PWA+  +  S  PISTR +++ T+VEAFAL A  L+SV S
Subjt:  VFIMKGRL-------DATGFMDITTTNTVVLKAGDFYGEEIIPWAMADRLIS-LPISTRRIKSQTKVEAFALEANQLRSVVS

AT1G01340.2 cyclic nucleotide gated channel 10

2.8e-39

49.45

Show/hide

Query:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM
        M+ R +P+ LR+ IR+Y+QY+WQ  RGV+EE L+  LP DL RDIKR L    CL  LKKVPLF  + ++LLD +   L+PVL+TE+S V++EG+PV  M
Subjt:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM

Query:  VFIMKGRL-------DATGFMDITTTNTVVLKAGDFYGEEIIPWAMADRLIS-LPISTRRIKSQTKVEAFALEANQLRSVVS
        +F+M+GRL         +GF      N V LKA DF GE+++PWA+  +  S  PISTR +++ T+VEAFAL A  L+SV S
Subjt:  VFIMKGRL-------DATGFMDITTTNTVVLKAGDFYGEEIIPWAMADRLIS-LPISTRRIKSQTKVEAFALEANQLRSVVS

AT1G15990.1 cyclic nucleotide gated channel 7

2.6e-37

47.25

Show/hide

Query:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM
        M  R +P+ LR  +R+YDQYKW   RGV EE ++  LP DL RDIKR L    CL  +++VPLF+++ +RLLD +   LKP LFTE + +++EG+PV  M
Subjt:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM

Query:  VFIMKGRLDA-------TGFMDITTTNTVVLKAGDFYGEEIIPWAMADRLIS-LPISTRRIKSQTKVEAFALEANQLRSVVS
        +FI++GRL++       +GF      N  +LK GDF GEE++ WA+  +  S LP STR +K+ T+VEAFALEA +L+ V S
Subjt:  VFIMKGRLDA-------TGFMDITTTNTVVLKAGDFYGEEIIPWAMADRLIS-LPISTRRIKSQTKVEAFALEANQLRSVVS

AT4G01010.1 cyclic nucleotide-gated channel 13

4.0e-38

48.9

Show/hide

Query:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM
        M+ R +P  LR+ IR+Y+QYKWQ  RGV+EE L+  LP DL RDIKR  HF  CL  LKKVPLF  + ++LLD +   LKPVL+TE+S  ++EG+PV  M
Subjt:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM

Query:  VFIMKGRL-------DATGFMDITTTNTVVLKAGDFYGEEIIPWAMADRLIS-LPISTRRIKSQTKVEAFALEANQLRSVVS
        +F+M+G+L         TGF      N V LK  DF GE+++ WA+  +  S  PISTR +++ T+VEAFAL A+ L+ V S
Subjt:  VFIMKGRL-------DATGFMDITTTNTVVLKAGDFYGEEIIPWAMADRLIS-LPISTRRIKSQTKVEAFALEANQLRSVVS

AT5G53130.1 cyclic nucleotide gated channel 1

5.2e-38

47.8

Show/hide

Query:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM
        M+ R +P+ LR+ IR+Y+QYKWQ  RGV EE L++ LP DL RDIKR L    CLA L +VP+F  + ++LLD +   L+PVL+TE+S +++EG+PV  M
Subjt:  MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRM

Query:  VFIMKGRL-------DATGFMDITTTNTVVLKAGDFYGEEIIPWAMADRLIS-LPISTRRIKSQTKVEAFALEANQLRSVVS
        +FIM+G+L         TGF+     N+  L AGDF GEE++ WA+     S LPISTR +++  +VEAFAL+A+ L+ V S
Subjt:  VFIMKGRL-------DATGFMDITTTNTVVLKAGDFYGEEIIPWAMADRLIS-LPISTRRIKSQTKVEAFALEANQLRSVVS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGACACAACGTAGGATCCCCAAGAAGTTGAGGCGGTGTATTAGACAATATGATCAGTACAAATGGCAGATAAATAGGGGAGTTAAGGAAGAGGAACTGATCAATGAACT
TCCAATAGACCTTGGAAGAGACATCAAACGCCTTCTTCACTTTGATGCTTGCTTGGCTAATCTTAAGAAAGTGCCACTTTTTAGTAGCATTGGTGACCGACTATTAGACG
TAATGCACGGATATCTCAAGCCAGTGTTATTCACAGAGGATAGCATCGTTTTGCAAGAGGGTGAACCAGTTGTTAGGATGGTATTTATCATGAAAGGAAGGCTGGATGCT
ACTGGCTTTATGGATATCACAACAACTAACACGGTCGTTCTTAAGGCTGGTGACTTTTATGGTGAAGAGATAATTCCATGGGCAATGGCAGACCGCCTCATTTCTCTTCC
AATTTCAACCAGAAGAATTAAATCTCAAACCAAGGTTGAAGCCTTTGCTCTAGAGGCTAATCAGTTGCGATCTGTAGTTAGTTTTACTCTCAACCATGGAGAGTCTGGGC
GGCCTTTAAAATATAAGAAGCTTGGCTTGACTACTGTCAAAGAAAGCAGAAGACAGGTGGTAGGTTTCGAGATGCATTGGCTAAAATCGTTGGCACCTCGAAAAACTCTA
GTGTCAATCTATATGTGTCCGTATTCATATCCCATCTACTGCAAGCTGTGCAGCAAGATCGACACCACGAAACAACCCGACACTCACAGATGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MTQRRIPKKLRRCIRQYDQYKWQINRGVKEEELINELPIDLGRDIKRLLHFDACLANLKKVPLFSSIGDRLLDVMHGYLKPVLFTEDSIVLQEGEPVVRMVFIMKGRLDA
TGFMDITTTNTVVLKAGDFYGEEIIPWAMADRLISLPISTRRIKSQTKVEAFALEANQLRSVVSFTLNHGESGRPLKYKKLGLTTVKESRRQVVGFEMHWLKSLAPRKTL
VSIYMCPYSYPIYCKLCSKIDTTKQPDTHR

Lsi05G021170 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome