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Lsi05G021210 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G021210
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionthioredoxin-like 2, chloroplastic
Genome locationchr05:28065598..28066599
RNA-Seq ExpressionLsi05G021210
SyntenyLsi05G021210
Gene Ontology termsGO:0045454 - cell redox homeostasis (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0016671 - oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048892.1 thioredoxin-like 2 [Cucumis melo var. makuwa]9.7e-2473.26Show/hide
Query:  MADVFRFSSHSFYFSSSSLPPSFASSYNSLHPSLPPIHNPDKRSSPLPCYSTSYVMPLSFRPRKRLVSFKFHVPNCYTGRFYGTLM
        MADVFRFSSHSFYFSS+SLPPSFASSY+SLHPSLP I NP+KRSSP+PCYSTSY MPLSFRPRK               RFYGTL+
Subjt:  MADVFRFSSHSFYFSSSSLPPSFASSYNSLHPSLPPIHNPDKRSSPLPCYSTSYVMPLSFRPRKRLVSFKFHVPNCYTGRFYGTLM
KAG7019070.1 Thioredoxin-like 2-2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]5.0e-2076.71Show/hide
Query:  MADVFRFSSHSFYFSSSSLPPSFASSYNSLHPSLPPIHNPDKRSSPLPCYSTSYVMPLSFRPRKRLVSFKFHV
        MADV RFSS+SFYFSS+SLPPSFASSYNSLHP L PI NP+KRS+PL  YS + +MPLSF PRKRLVSFK  V
Subjt:  MADVFRFSSHSFYFSSSSLPPSFASSYNSLHPSLPPIHNPDKRSSPLPCYSTSYVMPLSFRPRKRLVSFKFHV
XP_004133814.1 thioredoxin-like 2, chloroplastic [Cucumis sativus]6.1e-2690Show/hide
Query:  MADVFRFSSHSFYFSSSSLPPSFASSYNSLHPSLPPIHNPDKRSSPLPCYSTSYVMPLSFRPRKRLVSFK
        MADVFRFSSHSFYFSS+SLPPSFASSY+SLHPSLP I NP+KRSSP+PCYSTS+VMPLSFRPRKRLVSFK
Subjt:  MADVFRFSSHSFYFSSSSLPPSFASSYNSLHPSLPPIHNPDKRSSPLPCYSTSYVMPLSFRPRKRLVSFK
XP_008437900.1 PREDICTED: thioredoxin-like 2, chloroplastic [Cucumis melo]4.7e-2690Show/hide
Query:  MADVFRFSSHSFYFSSSSLPPSFASSYNSLHPSLPPIHNPDKRSSPLPCYSTSYVMPLSFRPRKRLVSFK
        MADVFRFSSHSFYFSS+SLPPSFASSY+SLHPSLP I NP+KRSSP+PCYSTSY MPLSFRPRKRLVSFK
Subjt:  MADVFRFSSHSFYFSSSSLPPSFASSYNSLHPSLPPIHNPDKRSSPLPCYSTSYVMPLSFRPRKRLVSFK
XP_038877589.1 thioredoxin-like 2, chloroplastic [Benincasa hispida]1.6e-2691.43Show/hide
Query:  MADVFRFSSHSFYFSSSSLPPSFASSYNSLHPSLPPIHNPDKRSSPLPCYSTSYVMPLSFRPRKRLVSFK
        MAD FRFSSHSFYFSSSSLPPSFASSYNSLHPSLPPI NP+K+ SPLPCYST+YVMPLSFRPRKRLVSFK
Subjt:  MADVFRFSSHSFYFSSSSLPPSFASSYNSLHPSLPPIHNPDKRSSPLPCYSTSYVMPLSFRPRKRLVSFK
TrEMBL top hitse value%identityAlignment
A0A0A0L760 Thioredoxin domain-containing protein2.9e-2690Show/hide
Query:  MADVFRFSSHSFYFSSSSLPPSFASSYNSLHPSLPPIHNPDKRSSPLPCYSTSYVMPLSFRPRKRLVSFK
        MADVFRFSSHSFYFSS+SLPPSFASSY+SLHPSLP I NP+KRSSP+PCYSTS+VMPLSFRPRKRLVSFK
Subjt:  MADVFRFSSHSFYFSSSSLPPSFASSYNSLHPSLPPIHNPDKRSSPLPCYSTSYVMPLSFRPRKRLVSFK
A0A1S3AV76 thioredoxin-like 2, chloroplastic2.3e-2690Show/hide
Query:  MADVFRFSSHSFYFSSSSLPPSFASSYNSLHPSLPPIHNPDKRSSPLPCYSTSYVMPLSFRPRKRLVSFK
        MADVFRFSSHSFYFSS+SLPPSFASSY+SLHPSLP I NP+KRSSP+PCYSTSY MPLSFRPRKRLVSFK
Subjt:  MADVFRFSSHSFYFSSSSLPPSFASSYNSLHPSLPPIHNPDKRSSPLPCYSTSYVMPLSFRPRKRLVSFK
A0A5D3DB74 Thioredoxin-like 24.7e-2473.26Show/hide
Query:  MADVFRFSSHSFYFSSSSLPPSFASSYNSLHPSLPPIHNPDKRSSPLPCYSTSYVMPLSFRPRKRLVSFKFHVPNCYTGRFYGTLM
        MADVFRFSSHSFYFSS+SLPPSFASSY+SLHPSLP I NP+KRSSP+PCYSTSY MPLSFRPRK               RFYGTL+
Subjt:  MADVFRFSSHSFYFSSSSLPPSFASSYNSLHPSLPPIHNPDKRSSPLPCYSTSYVMPLSFRPRKRLVSFKFHVPNCYTGRFYGTLM
A0A6J1E8Z8 thioredoxin-like 2, chloroplastic7.0e-2078.57Show/hide
Query:  MADVFRFSSHSFYFSSSSLPPSFASSYNSLHPSLPPIHNPDKRSSPLPCYSTSYVMPLSFRPRKRLVSFK
        MADV RFSS+SFYFSS+SLPPSFASSYNSLHP L PI NP+KRS+PL  YS + +MPLSF PRKRLVSFK
Subjt:  MADVFRFSSHSFYFSSSSLPPSFASSYNSLHPSLPPIHNPDKRSSPLPCYSTSYVMPLSFRPRKRLVSFK
A0A6J1IY90 thioredoxin-like 2, chloroplastic5.4e-2080Show/hide
Query:  MADVFRFSSHSFYFSSSSLPPSFASSYNSLHPSLPPIHNPDKRSSPLPCYSTSYVMPLSFRPRKRLVSFK
        MADV RFSS+SFYFSS+SLPPSFASSYNSLHP L  I NP+KRS+PL  YS + VMPLSFRPRKRLVSFK
Subjt:  MADVFRFSSHSFYFSSSSLPPSFASSYNSLHPSLPPIHNPDKRSSPLPCYSTSYVMPLSFRPRKRLVSFK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGATGTTTTTAGATTCTCGTCGCATTCCTTCTATTTCTCCTCCAGTTCTTTACCACCCTCCTTTGCCTCGTCTTACAATTCCCTTCATCCTTCTCTTCCACCCAT
TCATAACCCAGATAAGAGGTCGAGTCCTCTACCATGTTATTCCACTAGCTATGTAATGCCTCTTTCTTTCAGACCCAGAAAGAGGTTGGTATCTTTCAAGTTTCATGTGC
CGAATTGCTATACGGGCAGATTCTATGGAACCCTAATGGGGAAGGACCAGAGAAAAAGGGTGGATTCTTTTTATGAGTTCTCCGAGAAAGGAAGTTTTACGGCTGTCAGT
ATTGCCATGGCAATGGAGCCAGCTGCTTGTATGGACTAA
mRNA sequenceShow/hide mRNA sequence
GGTTAGGTCAAACTCGAAAGCCCAAGAATCCCATTACCAACCAACTTGACAAAGAAGAACAAAACCATAGCACCGTAATTGGGTAAAATGGCGGATTGTCAATGGTTGCA
GTGACCATCTCAATCCTGTAAAGCGTAAAATCCTTTCTCTTCTTCACGCGCACACTCTCCGGAGGTACTAGAATACTGATTTTTTACTCTCCCAAGTTGCAGAAGAAAAC
ATAGCCACAATTACAAACAACCCTTCTTCAACTTCTCGCTTTCTTTCTCTCTCGACTTCCCTTTTTCCCCATGCTGTTTAGCTAGTTCATCATCCTATTGGGATTTTACG
GGGAGAACTTTTGTCTTTTCAACTTGAATTTTGCCGCTTTCGTCTCTAAATGGCCGATGTTTTTAGATTCTCGTCGCATTCCTTCTATTTCTCCTCCAGTTCTTTACCAC
CCTCCTTTGCCTCGTCTTACAATTCCCTTCATCCTTCTCTTCCACCCATTCATAACCCAGATAAGAGGTCGAGTCCTCTACCATGTTATTCCACTAGCTATGTAATGCCT
CTTTCTTTCAGACCCAGAAAGAGGTTGGTATCTTTCAAGTTTCATGTGCCGAATTGCTATACGGGCAGATTCTATGGAACCCTAATGGGGAAGGACCAGAGAAAAAGGGT
GGATTCTTTTTATGAGTTCTCCGAGAAAGGAAGTTTTACGGCTGTCAGTATTGCCATGGCAATGGAGCCAGCTGCTTGTATGGACTAA
Protein sequenceShow/hide protein sequence
MADVFRFSSHSFYFSSSSLPPSFASSYNSLHPSLPPIHNPDKRSSPLPCYSTSYVMPLSFRPRKRLVSFKFHVPNCYTGRFYGTLMGKDQRKRVDSFYEFSEKGSFTAVS
IAMAMEPAACMD