; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G021320 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G021320
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein of unknown function (DUF688)
Genome locationchr05:28161093..28162129
RNA-Seq ExpressionLsi05G021320
SyntenyLsi05G021320
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019077.1 Exportin-2, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-7475.88Show/hide
Query:  MGSEAKVWQNCEVPKLPLLAIAAMESPDRCGMLTPPIHTSVSVPFRWEEEPGKPRFCFTTPN--TATQTNCLELPPRLLLFDPKTPKLPSQNP----LFQ
        MGSEAK+W+N +VPKLPLLA+AAMESPDR GMLTPPIHTSVSVPFRWEEEPGKPRFCF TPN  +ATQT CLELPPRLLL DPK  KLP   P    +FQ
Subjt:  MGSEAKVWQNCEVPKLPLLAIAAMESPDRCGMLTPPIHTSVSVPFRWEEEPGKPRFCFTTPN--TATQTNCLELPPRLLLFDPKTPKLPSQNP----LFQ

Query:  FHKHCCGSFRFHKTQLGAMVLRKRGVLLEKEWFCWLGKFNFGRKGTVGSACRSVFPSSL----EDGTVAERSSSRM----TQKNGSFSSCLVQSKTEFW
        F K   GSFR+ KTQLGAMVLRKRGVL+E EWFCWLGK +FGRKG VGSA  SVFPSSL    EDG VAERSSS M    TQK GSFSSCLV++KTEFW
Subjt:  FHKHCCGSFRFHKTQLGAMVLRKRGVLLEKEWFCWLGKFNFGRKGTVGSACRSVFPSSL----EDGTVAERSSSRM----TQKNGSFSSCLVQSKTEFW

XP_022924712.1 uncharacterized protein At4g00950-like [Cucurbita moschata]4.3e-7475.88Show/hide
Query:  MGSEAKVWQNCEVPKLPLLAIAAMESPDRCGMLTPPIHTSVSVPFRWEEEPGKPRFCFTTPN--TATQTNCLELPPRLLLFDPKTPKLPSQNP----LFQ
        MGSEAK+W+N +VPKLPLLA+AAMESPDR GMLTPPIHTSVSVPFRWEEEPGKPRFCF TPN  +ATQT CLELPPRLLL DPK  KLP   P    +FQ
Subjt:  MGSEAKVWQNCEVPKLPLLAIAAMESPDRCGMLTPPIHTSVSVPFRWEEEPGKPRFCFTTPN--TATQTNCLELPPRLLLFDPKTPKLPSQNP----LFQ

Query:  FHKHCCGSFRFHKTQLGAMVLRKRGVLLEKEWFCWLGKFNFGRKGTVGSACRSVFPSSL----EDGTVAERSSSRM----TQKNGSFSSCLVQSKTEFW
        F K   GSFR+ KTQLGAMVLRKRGVL+E EWFCWLGK +FGRKG VGSA  SVFPSSL    EDG VAERSSS M    TQK GSFSSCLV++KTEFW
Subjt:  FHKHCCGSFRFHKTQLGAMVLRKRGVLLEKEWFCWLGKFNFGRKGTVGSACRSVFPSSL----EDGTVAERSSSRM----TQKNGSFSSCLVQSKTEFW

XP_022980847.1 uncharacterized protein At4g00950 [Cucurbita maxima]5.0e-7876.88Show/hide
Query:  MGSEAKVWQNCEVPKLPLLAIAAMESPDRCGMLTPPIHTSVSVPFRWEEEPGKPRFCFTTPN--TATQTNCLELPPRLLLFDPKTPKLPSQNP----LFQ
        MGSEAK+W+N EVPKLPLLA+AAMESPDR GMLTPPIHTSVSVPFRWEEEPGKPRFCF TPN  +ATQT CLELPPRLLL DPK  KLP   P    +FQ
Subjt:  MGSEAKVWQNCEVPKLPLLAIAAMESPDRCGMLTPPIHTSVSVPFRWEEEPGKPRFCFTTPN--TATQTNCLELPPRLLLFDPKTPKLPSQNP----LFQ

Query:  FHKHCCGSFRFHKTQLGAMVLRKRGVLLEKEWFCWLGKFNFGRKGTVGSACRSVFPSSL----EDGTVAERSSSRM----TQKNGSFSSCLVQSKTEFW
          K  CGSFR+ K+QLGAMVLRKRGVL+EKEWFCWLGK +FGRKG VGSAC SVFPSSL    EDG VAERSSS M    TQK GSFSSCLV++KTEFW
Subjt:  FHKHCCGSFRFHKTQLGAMVLRKRGVLLEKEWFCWLGKFNFGRKGTVGSACRSVFPSSL----EDGTVAERSSSRM----TQKNGSFSSCLVQSKTEFW

XP_023527385.1 uncharacterized protein At4g00950-like [Cucurbita pepo subsp. pepo]1.2e-7676.38Show/hide
Query:  MGSEAKVWQNCEVPKLPLLAIAAMESPDRCGMLTPPIHTSVSVPFRWEEEPGKPRFCFTTP--NTATQTNCLELPPRLLLFDPKTPKLPSQNP----LFQ
        MGSEAK+W+N EVPKLPLLA+AAMESPDR GMLTPPIHTSVSVPFRWEEEPGKPRFCF TP  ++ATQT CLELPPRLLL DPK  KLP   P    +FQ
Subjt:  MGSEAKVWQNCEVPKLPLLAIAAMESPDRCGMLTPPIHTSVSVPFRWEEEPGKPRFCFTTP--NTATQTNCLELPPRLLLFDPKTPKLPSQNP----LFQ

Query:  FHKHCCGSFRFHKTQLGAMVLRKRGVLLEKEWFCWLGKFNFGRKGTVGSACRSVFPSSL----EDGTVAERSSSRM----TQKNGSFSSCLVQSKTEFW
        F K  CGSFR+ KTQLGAMVLRKRGVL+EKEWFCWLGK +FGRKG VGSA  SVFPSSL    ED  VAERSSS M    TQK GSFSSCLV++KTEFW
Subjt:  FHKHCCGSFRFHKTQLGAMVLRKRGVLLEKEWFCWLGKFNFGRKGTVGSACRSVFPSSL----EDGTVAERSSSRM----TQKNGSFSSCLVQSKTEFW

XP_038896089.1 uncharacterized protein At4g00950-like [Benincasa hispida]1.5e-7978.76Show/hide
Query:  MGSEAKVWQNCEVPKLPLLAIAAMESPDRCGMLTPPIHTSVSVPFRWEEEPGKPRFCFTTPNTATQTNCLELPPRLLLFDPKTPKL----PSQNPLFQFH
        MGSE K W N EVPKLPLLAIAAMESPDR GMLTPP+HTSVSVPFRWEEEPGKPR CFT+PN  TQTN LELPPRL L DPK PKL    PSQ   FQF 
Subjt:  MGSEAKVWQNCEVPKLPLLAIAAMESPDRCGMLTPPIHTSVSVPFRWEEEPGKPRFCFTTPNTATQTNCLELPPRLLLFDPKTPKL----PSQNPLFQFH

Query:  KHCCGSFRFHKTQLGAMVLRKRGVLLEKEWFCWLGKFNFGRKGTVGSACRSVFPSSLEDGTVAERSSSRM----TQKNGSFSSCLVQSKTEFW
        K C GSFRFHKTQLGAMVLRKRGVL+EKEWFCWLGK NFGRKG VGSA  SVFPSSLEDG VAERSSSRM    T+K G+FSSCL+Q K +FW
Subjt:  KHCCGSFRFHKTQLGAMVLRKRGVLLEKEWFCWLGKFNFGRKGTVGSACRSVFPSSLEDGTVAERSSSRM----TQKNGSFSSCLVQSKTEFW

TrEMBL top hitse value%identityAlignment
A0A5A7U0F3 Uncharacterized protein1.7e-7173.6Show/hide
Query:  MGSEAKVWQNCEVPKLPLLAIAAMESPDRCGMLTPPIHTSVSVPFRWEEEPGKPRFCFTTPN----TATQTNCLELPPRLLLFDPKTPKL----PSQNPL
        M SEAK+ +N EVPKLPLLAI AMESPDR GMLTPPI +SVSVPFRWEEEPGKPRFCF + N    T TQTN LELPPRLLL DPK PKL    PSQ   
Subjt:  MGSEAKVWQNCEVPKLPLLAIAAMESPDRCGMLTPPIHTSVSVPFRWEEEPGKPRFCFTTPN----TATQTNCLELPPRLLLFDPKTPKL----PSQNPL

Query:  FQFHKHCCGSFRFHKTQLGAMVLRKRGVLLEKEWFCWLGKFNFGRKGTVGSACRSVFPSSLEDGTVAERSSSRM----TQKNGSFSSCLVQSKTEFW
        FQFHKHCC SFRFHKTQLGAMVLRKRG+L+EKEWFCW  K NF RKG VGS   +VFPSSL+     ERSSSRM    TQK GSFSSC VQ+KTEFW
Subjt:  FQFHKHCCGSFRFHKTQLGAMVLRKRGVLLEKEWFCWLGKFNFGRKGTVGSACRSVFPSSLEDGTVAERSSSRM----TQKNGSFSSCLVQSKTEFW

A0A5D3DBI9 Uncharacterized protein2.0e-7274.11Show/hide
Query:  MGSEAKVWQNCEVPKLPLLAIAAMESPDRCGMLTPPIHTSVSVPFRWEEEPGKPRFCFTTPN----TATQTNCLELPPRLLLFDPKTPKL----PSQNPL
        MGSEAK+ +N EVPKLPLLAI AMESPDR GMLTPPI +SVSVPFRWEEEPGKPRFCF + N    T TQTN LELPPRLLL DPK PKL    PSQ   
Subjt:  MGSEAKVWQNCEVPKLPLLAIAAMESPDRCGMLTPPIHTSVSVPFRWEEEPGKPRFCFTTPN----TATQTNCLELPPRLLLFDPKTPKL----PSQNPL

Query:  FQFHKHCCGSFRFHKTQLGAMVLRKRGVLLEKEWFCWLGKFNFGRKGTVGSACRSVFPSSLEDGTVAERSSSRM----TQKNGSFSSCLVQSKTEFW
        FQFHKHCC SFRFHKTQLGAMVLRKRG+L+EKEWFCW  K NF RKG VGS   +VFPSSL+     ERSSSRM    TQK GSFSSC VQ+KTEFW
Subjt:  FQFHKHCCGSFRFHKTQLGAMVLRKRGVLLEKEWFCWLGKFNFGRKGTVGSACRSVFPSSLEDGTVAERSSSRM----TQKNGSFSSCLVQSKTEFW

A0A6J1D0Z4 uncharacterized protein At4g009508.3e-7169.65Show/hide
Query:  MGSEAKVWQNCEVPKLPLLAIAAMESPDRCGMLTPPIHTSVSVPFRWEEEPGKPRFCFTTPN---TATQTNCLELPPRLLLFDPKTPKLP----SQNPLF
        MGSEAK+W+N E+PKLPLLAI AMESPDR GM TPPI +SVSVPFRWEEEPGKPRFCFTTPN   +  Q  CLELPPRLLL +PK PKLP    +  P  
Subjt:  MGSEAKVWQNCEVPKLPLLAIAAMESPDRCGMLTPPIHTSVSVPFRWEEEPGKPRFCFTTPN---TATQTNCLELPPRLLLFDPKTPKLP----SQNPLF

Query:  QFHKHCCGSFRFHKTQLGAMVLRKRGVLLEKEWFCWLGKFNFGRKGTVGSACRSVFPSSLEDGTVAER-----SSSRM----TQKNGSFSSCLVQSKTEF
         F   CCGSFRF K QLGAMVLRKRGVL+EKEWFCWLG  +FGR+G +GSAC SVFPSSLE G+ +E      SSSRM    T   GSFSSCLVQ+KTEF
Subjt:  QFHKHCCGSFRFHKTQLGAMVLRKRGVLLEKEWFCWLGKFNFGRKGTVGSACRSVFPSSLEDGTVAER-----SSSRM----TQKNGSFSSCLVQSKTEF

Query:  W
        W
Subjt:  W

A0A6J1E9R6 uncharacterized protein At4g00950-like2.1e-7475.88Show/hide
Query:  MGSEAKVWQNCEVPKLPLLAIAAMESPDRCGMLTPPIHTSVSVPFRWEEEPGKPRFCFTTPN--TATQTNCLELPPRLLLFDPKTPKLPSQNP----LFQ
        MGSEAK+W+N +VPKLPLLA+AAMESPDR GMLTPPIHTSVSVPFRWEEEPGKPRFCF TPN  +ATQT CLELPPRLLL DPK  KLP   P    +FQ
Subjt:  MGSEAKVWQNCEVPKLPLLAIAAMESPDRCGMLTPPIHTSVSVPFRWEEEPGKPRFCFTTPN--TATQTNCLELPPRLLLFDPKTPKLPSQNP----LFQ

Query:  FHKHCCGSFRFHKTQLGAMVLRKRGVLLEKEWFCWLGKFNFGRKGTVGSACRSVFPSSL----EDGTVAERSSSRM----TQKNGSFSSCLVQSKTEFW
        F K   GSFR+ KTQLGAMVLRKRGVL+E EWFCWLGK +FGRKG VGSA  SVFPSSL    EDG VAERSSS M    TQK GSFSSCLV++KTEFW
Subjt:  FHKHCCGSFRFHKTQLGAMVLRKRGVLLEKEWFCWLGKFNFGRKGTVGSACRSVFPSSL----EDGTVAERSSSRM----TQKNGSFSSCLVQSKTEFW

A0A6J1ISE2 uncharacterized protein At4g009502.4e-7876.88Show/hide
Query:  MGSEAKVWQNCEVPKLPLLAIAAMESPDRCGMLTPPIHTSVSVPFRWEEEPGKPRFCFTTPN--TATQTNCLELPPRLLLFDPKTPKLPSQNP----LFQ
        MGSEAK+W+N EVPKLPLLA+AAMESPDR GMLTPPIHTSVSVPFRWEEEPGKPRFCF TPN  +ATQT CLELPPRLLL DPK  KLP   P    +FQ
Subjt:  MGSEAKVWQNCEVPKLPLLAIAAMESPDRCGMLTPPIHTSVSVPFRWEEEPGKPRFCFTTPN--TATQTNCLELPPRLLLFDPKTPKLPSQNP----LFQ

Query:  FHKHCCGSFRFHKTQLGAMVLRKRGVLLEKEWFCWLGKFNFGRKGTVGSACRSVFPSSL----EDGTVAERSSSRM----TQKNGSFSSCLVQSKTEFW
          K  CGSFR+ K+QLGAMVLRKRGVL+EKEWFCWLGK +FGRKG VGSAC SVFPSSL    EDG VAERSSS M    TQK GSFSSCLV++KTEFW
Subjt:  FHKHCCGSFRFHKTQLGAMVLRKRGVLLEKEWFCWLGKFNFGRKGTVGSACRSVFPSSL----EDGTVAERSSSRM----TQKNGSFSSCLVQSKTEFW

SwissProt top hitse value%identityAlignment
Q9M160 Uncharacterized protein At4g009502.9e-0435.63Show/hide
Query:  NCEVPKLPLLAIAAMESPDRCGMLTPPIHTSV--SVPFRWEEEPGKPRFCFTTPNTATQTN--------------CLELPPRLLLFD
        N  V KLP+L     +       ++ PIH+S+  SVPF WEEEPGKP+   T+ ++++ ++               LELPPRL L +
Subjt:  NCEVPKLPLLAIAAMESPDRCGMLTPPIHTSV--SVPFRWEEEPGKPRFCFTTPNTATQTN--------------CLELPPRLLLFD

Arabidopsis top hitse value%identityAlignment
AT2G46535.1 unknown protein3.7e-0739Show/hide
Query:  SPDRCGMLTPPIHTSVSVPFRWEEEPGKPRFCFTTPNTATQTNCLELPPRLLLFDPKTPKLPSQNPLFQFHKHCCGSFRF-HKTQLGAMVLRKRGVLLEK
        SP    +   PIHT  SVPF WE++PGKP+         +   CL+LPPRLLL     P   +Q PL +  KH  G  RF  +   G +V+R   V L +
Subjt:  SPDRCGMLTPPIHTSVSVPFRWEEEPGKPRFCFTTPNTATQTNCLELPPRLLLFDPKTPKLPSQNPLFQFHKHCCGSFRF-HKTQLGAMVLRKRGVLLEK

AT4G00950.1 Protein of unknown function (DUF688)2.1e-0535.63Show/hide
Query:  NCEVPKLPLLAIAAMESPDRCGMLTPPIHTSV--SVPFRWEEEPGKPRFCFTTPNTATQTN--------------CLELPPRLLLFD
        N  V KLP+L     +       ++ PIH+S+  SVPF WEEEPGKP+   T+ ++++ ++               LELPPRL L +
Subjt:  NCEVPKLPLLAIAAMESPDRCGMLTPPIHTSV--SVPFRWEEEPGKPRFCFTTPNTATQTN--------------CLELPPRLLLFD

AT4G27810.1 unknown protein1.2e-1044.16Show/hide
Query:  CEVPKLPLLAIAAMESPDRCGMLTPPIHTSVSVPFRWEEEPGKPRFCFTTPNTATQTN-----------CLELPPRL
        C  PKLPL +I    + D  G+ TPP++ + SVPF WEE PGKPR        A++ N           CLELPPRL
Subjt:  CEVPKLPLLAIAAMESPDRCGMLTPPIHTSVSVPFRWEEEPGKPRFCFTTPNTATQTN-----------CLELPPRL

AT5G53030.1 unknown protein2.2e-0730.1Show/hide
Query:  PLLAIAAMESPDRCGMLTPPIHTSVSVPFRWEEEPGKPRFCFTTP--NTATQTNCLELPPRLLL-FDPKTPKLPSQNPLFQFHKHCCGSFRFHKTQL---
        P+  IA   +P   G+ TPP++ + SVPF WEE PGKPR        N       LELPPRL+L  +  T   PS   +        G +   +  L   
Subjt:  PLLAIAAMESPDRCGMLTPPIHTSVSVPFRWEEEPGKPRFCFTTP--NTATQTNCLELPPRLLL-FDPKTPKLPSQNPLFQFHKHCCGSFRFHKTQL---

Query:  -GAMVLRK-RGV---LLEKE---------WFCW-------LGKFNFGRKGTVGSACRSVFPSSLEDGTVAERSSSRMTQ--KNGSFSSCLVQSKTEFWVI
          A V+RK RGV     EKE         W  +        G F+F R    G  CR  +      G  A  +  ++ +  K GSF +    +K++FW+ 
Subjt:  -GAMVLRK-RGV---LLEKE---------WFCW-------LGKFNFGRKGTVGSACRSVFPSSLEDGTVAERSSSRMTQ--KNGSFSSCLVQSKTEFWVI

Query:  LQPPLF
        +Q  ++
Subjt:  LQPPLF

AT5G53030.2 unknown protein9.2e-0645.31Show/hide
Query:  PLLAIAAMESPDRCGMLTPPIHTSVSVPFRWEEEPGKPRFCFTTP--NTATQTNCLELPPRLLL
        P+  IA   +P   G+ TPP++ + SVPF WEE PGKPR        N       LELPPRL+L
Subjt:  PLLAIAAMESPDRCGMLTPPIHTSVSVPFRWEEEPGKPRFCFTTP--NTATQTNCLELPPRLLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGTGAAGCAAAGGTATGGCAGAATTGTGAAGTACCAAAGCTTCCATTACTTGCAATTGCAGCAATGGAGTCTCCAGATAGGTGTGGAATGCTAACCCCACCAAT
CCACACCTCAGTCTCAGTCCCATTTCGATGGGAAGAAGAGCCTGGCAAGCCCAGGTTCTGTTTCACAACCCCCAACACAGCCACTCAAACAAACTGCCTTGAACTTCCAC
CAAGATTGTTACTATTTGATCCCAAAACCCCTAAACTCCCTTCTCAAAACCCTCTTTTTCAGTTTCATAAGCACTGTTGTGGGTCATTCAGATTCCATAAAACTCAGCTT
GGAGCCATGGTTCTCAGAAAGAGAGGAGTACTGTTAGAGAAGGAATGGTTTTGTTGGTTGGGAAAATTTAATTTTGGCCGCAAAGGGACAGTTGGGTCTGCCTGTCGAAG
TGTATTTCCTTCTTCTTTGGAAGATGGGACTGTTGCAGAGAGAAGCAGTTCAAGGATGACCCAGAAAAATGGGAGCTTTTCTTCTTGTCTTGTCCAATCCAAGACTGAGT
TTTGGGTAATTTTACAACCACCCCTCTTCTTCTCTGCCTTTATATATGTTAGCAATCACGACATTTTAAAGTTCATAGCTTTCTGTGAAGAGTCTTTCCCTCCTGGGAAG
CATAGGCGACGGGTTGAAACAGATCAACATTCCATGGAAGAGCAAAAAAGCATAAGAAAGAGCACTGGTATCATCAAAATGTTTATGAATAAAACCGAGTTTAGCTTGTT
GTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGTGAAGCAAAGGTATGGCAGAATTGTGAAGTACCAAAGCTTCCATTACTTGCAATTGCAGCAATGGAGTCTCCAGATAGGTGTGGAATGCTAACCCCACCAAT
CCACACCTCAGTCTCAGTCCCATTTCGATGGGAAGAAGAGCCTGGCAAGCCCAGGTTCTGTTTCACAACCCCCAACACAGCCACTCAAACAAACTGCCTTGAACTTCCAC
CAAGATTGTTACTATTTGATCCCAAAACCCCTAAACTCCCTTCTCAAAACCCTCTTTTTCAGTTTCATAAGCACTGTTGTGGGTCATTCAGATTCCATAAAACTCAGCTT
GGAGCCATGGTTCTCAGAAAGAGAGGAGTACTGTTAGAGAAGGAATGGTTTTGTTGGTTGGGAAAATTTAATTTTGGCCGCAAAGGGACAGTTGGGTCTGCCTGTCGAAG
TGTATTTCCTTCTTCTTTGGAAGATGGGACTGTTGCAGAGAGAAGCAGTTCAAGGATGACCCAGAAAAATGGGAGCTTTTCTTCTTGTCTTGTCCAATCCAAGACTGAGT
TTTGGGTAATTTTACAACCACCCCTCTTCTTCTCTGCCTTTATATATGTTAGCAATCACGACATTTTAAAGTTCATAGCTTTCTGTGAAGAGTCTTTCCCTCCTGGGAAG
CATAGGCGACGGGTTGAAACAGATCAACATTCCATGGAAGAGCAAAAAAGCATAAGAAAGAGCACTGGTATCATCAAAATGTTTATGAATAAAACCGAGTTTAGCTTGTT
GTAATGTAAATGCATCAAATAATCGTAATTTGGAGGACTGATGCTTTAACTAATGGCTGAGATCTTATCACATTTGATATTCTTGTACAGAAATAATGTTACGACTTTAT
GAGTTGAATGATCATATGTTTTCGACAATTTTCAAGAAGTGAAAGACATCTTCTTAATCCCCCA
Protein sequenceShow/hide protein sequence
MGSEAKVWQNCEVPKLPLLAIAAMESPDRCGMLTPPIHTSVSVPFRWEEEPGKPRFCFTTPNTATQTNCLELPPRLLLFDPKTPKLPSQNPLFQFHKHCCGSFRFHKTQL
GAMVLRKRGVLLEKEWFCWLGKFNFGRKGTVGSACRSVFPSSLEDGTVAERSSSRMTQKNGSFSSCLVQSKTEFWVILQPPLFFSAFIYVSNHDILKFIAFCEESFPPGK
HRRRVETDQHSMEEQKSIRKSTGIIKMFMNKTEFSLL