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Lsi05G021360 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G021360
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionKrueppel-like factor
Genome locationchr05:28185353..28186306
RNA-Seq ExpressionLsi05G021360
SyntenyLsi05G021360
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004133805.1 uncharacterized protein LOC101207877 [Cucumis sativus]2.2e-3278.49Show/hide
Query:  GEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGACIAGGIGA-------------EDGGVIWEFDK
        G EQKDP KGVDWKAVGGDMQK+PS+TNIIKKRRPTKIRQIPDYYFLPRRSLPS +AFYGACIAGGIGA             +DGGVIWEFDK
Subjt:  GEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGACIAGGIGA-------------EDGGVIWEFDK
XP_008437869.1 PREDICTED: uncharacterized protein LOC103483172 [Cucumis melo]8.4e-3277.42Show/hide
Query:  GEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGACIAGGIGA-------------EDGGVIWEFDK
        G EQKDPFKGVDWKAVGGDMQK+PS+TNIIKKRRPTKIRQIPDYYFLPRR LP  +AFYGACIAGGIGA             +DGGVIWEFDK
Subjt:  GEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGACIAGGIGA-------------EDGGVIWEFDK
XP_022942020.1 uncharacterized protein LOC111447184 [Cucurbita moschata]1.1e-3173.4Show/hide
Query:  MGEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGACIAGGIGA-------------EDGGVIWEFDK
        M EE KDPFKGVDWKAVGGDMQK+PS+ NI+KKRRPTK+RQIP+YYFLPRRSLPS +AFYGACIAGGIGA             +DGGV+WEFDK
Subjt:  MGEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGACIAGGIGA-------------EDGGVIWEFDK
XP_022975548.1 uncharacterized protein LOC111475080 [Cucurbita maxima]9.3e-3172.34Show/hide
Query:  MGEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGACIAGGIGA-------------EDGGVIWEFDK
        M EE KDPFKGVDWKAVGGDMQK+PS+ NI+KKRRPTK+RQIP+YYFLPRRSL S +AFYGACIAGGIGA             +DGGV+WEFDK
Subjt:  MGEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGACIAGGIGA-------------EDGGVIWEFDK
XP_023522177.1 uncharacterized protein LOC111786056 [Cucurbita pepo subsp. pepo]1.1e-3173.4Show/hide
Query:  MGEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGACIAGGIGA-------------EDGGVIWEFDK
        M EE KDPFKGVDWKAVGGDMQK+PS+ NI+KKRRPTK+RQIP+YYFLPRRSLPS +AFYGACIAGGIGA             +DGGV+WEFDK
Subjt:  MGEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGACIAGGIGA-------------EDGGVIWEFDK
TrEMBL top hitse value%identityAlignment
A0A0A0L8I7 Uncharacterized protein1.1e-3278.49Show/hide
Query:  GEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGACIAGGIGA-------------EDGGVIWEFDK
        G EQKDP KGVDWKAVGGDMQK+PS+TNIIKKRRPTKIRQIPDYYFLPRRSLPS +AFYGACIAGGIGA             +DGGVIWEFDK
Subjt:  GEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGACIAGGIGA-------------EDGGVIWEFDK
A0A1S3AV52 uncharacterized protein LOC1034831724.1e-3277.42Show/hide
Query:  GEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGACIAGGIGA-------------EDGGVIWEFDK
        G EQKDPFKGVDWKAVGGDMQK+PS+TNIIKKRRPTKIRQIPDYYFLPRR LP  +AFYGACIAGGIGA             +DGGVIWEFDK
Subjt:  GEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGACIAGGIGA-------------EDGGVIWEFDK
A0A5D3DB39 Uncharacterized protein4.1e-3277.42Show/hide
Query:  GEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGACIAGGIGA-------------EDGGVIWEFDK
        G EQKDPFKGVDWKAVGGDMQK+PS+TNIIKKRRPTKIRQIPDYYFLPRR LP  +AFYGACIAGGIGA             +DGGVIWEFDK
Subjt:  GEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGACIAGGIGA-------------EDGGVIWEFDK
A0A6J1FVE8 uncharacterized protein LOC1114471845.3e-3273.4Show/hide
Query:  MGEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGACIAGGIGA-------------EDGGVIWEFDK
        M EE KDPFKGVDWKAVGGDMQK+PS+ NI+KKRRPTK+RQIP+YYFLPRRSLPS +AFYGACIAGGIGA             +DGGV+WEFDK
Subjt:  MGEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGACIAGGIGA-------------EDGGVIWEFDK
A0A6J1IJJ2 uncharacterized protein LOC1114750804.5e-3172.34Show/hide
Query:  MGEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGACIAGGIGA-------------EDGGVIWEFDK
        M EE KDPFKGVDWKAVGGDMQK+PS+ NI+KKRRPTK+RQIP+YYFLPRRSL S +AFYGACIAGGIGA             +DGGV+WEFDK
Subjt:  MGEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGACIAGGIGA-------------EDGGVIWEFDK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G16950.1 unknown protein1.0e-1139.18Show/hide
Query:  EEQKDPFKGVDWKAVGGDMQKNPSATNI-----IKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGACIAGGIGA-------------EDGGVIWEFDK
        E  KDP+KG +W     +  K P+ + +      +K+ P  +    + YFLPR+  P A+A+YG+ I GGIGA             EDGGVIWEFDK
Subjt:  EEQKDPFKGVDWKAVGGDMQKNPSATNI-----IKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGACIAGGIGA-------------EDGGVIWEFDK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGAAGAGCAAAAAGACCCTTTTAAGGGAGTGGACTGGAAAGCCGTGGGTGGGGATATGCAGAAAAATCCCAGCGCTACAAACATTATAAAGAAAAGGCGTCCAAC
AAAAATTAGGCAAATTCCAGATTATTATTTTCTTCCTAGAAGATCCCTTCCTTCTGCCATTGCATTCTATGGGGCCTGTATTGCAGGTGGAATTGGTGCTGAGGATGGAG
GTGTCATCTGGGAGTTTGACAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGAAGAGCAAAAAGACCCTTTTAAGGGAGTGGACTGGAAAGCCGTGGGTGGGGATATGCAGAAAAATCCCAGCGCTACAAACATTATAAAGAAAAGGCGTCCAAC
AAAAATTAGGCAAATTCCAGATTATTATTTTCTTCCTAGAAGATCCCTTCCTTCTGCCATTGCATTCTATGGGGCCTGTATTGCAGGTGGAATTGGTGCTGAGGATGGAG
GTGTCATCTGGGAGTTTGACAAGTAGAGTACAAGAGAAGTATGAAGTTGTATTAATCAAGCAGAACAAGATCATCAAGTTGCTGGGTTTTGTTTTATCGTTAATCCTAGT
TTTTTTGCACGCATAATTGTTTTTTCCCCCTGAAGTTATAACCTCCAATTGAGCTGTTGGTTGTTTCTCTAATTATAGATCAAGCACAACTAACATTGAATGCAATCATT
TTTGGTATAAACCTTGCACAGATTGCTGCTTTGCTCTTCTAAAGCTGGGTTGTAATACTCTACTGAAACCAAACTTCCATTTGTAATACCCTGAACCTTGCACATGTGCT
GGTTAATAATCGATTGTGGTACATCCTCTGATTTGTAATACCCTACTGAATTTAATACAGACGTTACTTTTTTGTTTGACAAGG
Protein sequenceShow/hide protein sequence
MGEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGACIAGGIGAEDGGVIWEFDK