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Lsi05G021480 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G021480
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein yippee-like
Genome locationchr05:28245389..28246655
RNA-Seq ExpressionLsi05G021480
SyntenyLsi05G021480
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR004910 - Yippee/Mis18/Cereblon
IPR034751 - Yippee domain
IPR039058 - Yippee family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004133801.2 protein yippee-like At4g27745 [Cucumis sativus]2.4e-4871.03Show/hide
Query:  KVDRLKGTTLHS-----FLSRERKKKKEGEAY-----PSMADLIRERLYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRY
        K++ LKGTTLHS     FL RE+++KKE         PS+ DLIRER+YSC NCRNQ+SRHDDIISKGFQSV+GRAFLFYEAKNVREG ++ KMLI+G Y
Subjt:  KVDRLKGTTLHS-----FLSRERKKKKEGEAY-----PSMADLIRERLYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRY

Query:  IVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITNASS
         V DL+C ECGQ+LGWKYIKAY+ +QKYKEGKVVLEKFKIT ASS
Subjt:  IVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITNASS

XP_008437856.1 PREDICTED: protein yippee-like At4g27745 [Cucumis melo]1.5e-4785.19Show/hide
Query:  PSMADLIRERLYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEK
        PS+ADL+RER+YSCQNCRNQ+SRHDDIISKGFQSV+GRAFLFYEA+NVREG ++ KM ISG Y VCDL+C ECGQILGWKYIKAYDDSQKYKEGKVVLEK
Subjt:  PSMADLIRERLYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEK

Query:  FKITNASS
        FKIT+ASS
Subjt:  FKITNASS

XP_022924571.1 protein yippee-like At4g27745 isoform X1 [Cucurbita moschata]3.5e-4467.36Show/hide
Query:  KVDRLKGTTLHSFLSRERKKKKEG-----------EAYPSMADL-IRERLYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISG
        ++  LKGTTLH+F S   ++ + G            +   MADL I  RLYSCQNC N+VSRHDDIISKGFQS+RGRAFLFYEA+NV EG QQEKML+SG
Subjt:  KVDRLKGTTLHSFLSRERKKKKEG-----------EAYPSMADL-IRERLYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISG

Query:  RYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITN
         YIV DLFC ECGQ+LGWKYIKAYD++Q+YKEGKVVLEKFKITN
Subjt:  RYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITN

XP_022924572.1 protein yippee-like At4g27745 isoform X2 [Cucurbita moschata]8.4e-4673.13Show/hide
Query:  KVDRLKGTTLHSFLSRERKKKKEGEAYPS-MADL-IRERLYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCC
        ++  LKGTTLH+F S   ++ + G    S MADL I  RLYSCQNC N+VSRHDDIISKGFQS+RGRAFLFYEA+NV EG QQEKML+SG YIV DLFC 
Subjt:  KVDRLKGTTLHSFLSRERKKKKEGEAYPS-MADL-IRERLYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCC

Query:  ECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITN
        ECGQ+LGWKYIKAYD++Q+YKEGKVVLEKFKITN
Subjt:  ECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITN

XP_022979315.1 protein yippee-like At4g27745 [Cucurbita maxima]4.9e-4673.13Show/hide
Query:  KVDRLKGTTLHSFLSRERKKKKEGEAYPS-MADL-IRERLYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCC
        ++  LKGTTLH+FL    ++ + G    S MADL I  RLYSCQNC N+VSRHDDIISKGFQS+RGRAFLFYEA+NV EG QQEKML+SG YIV DLFC 
Subjt:  KVDRLKGTTLHSFLSRERKKKKEGEAYPS-MADL-IRERLYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCC

Query:  ECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITN
        ECGQ+LGWKYIKAYD++Q+YKEGKVVLEKFKITN
Subjt:  ECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITN

TrEMBL top hitse value%identityAlignment
A0A1S3AV44 Protein yippee-like7.4e-4885.19Show/hide
Query:  PSMADLIRERLYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEK
        PS+ADL+RER+YSCQNCRNQ+SRHDDIISKGFQSV+GRAFLFYEA+NVREG ++ KM ISG Y VCDL+C ECGQILGWKYIKAYDDSQKYKEGKVVLEK
Subjt:  PSMADLIRERLYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEK

Query:  FKITNASS
        FKIT+ASS
Subjt:  FKITNASS

A0A5A7U5X0 Protein yippee-like7.4e-4885.19Show/hide
Query:  PSMADLIRERLYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEK
        PS+ADL+RER+YSCQNCRNQ+SRHDDIISKGFQSV+GRAFLFYEA+NVREG ++ KM ISG Y VCDL+C ECGQILGWKYIKAYDDSQKYKEGKVVLEK
Subjt:  PSMADLIRERLYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEK

Query:  FKITNASS
        FKIT+ASS
Subjt:  FKITNASS

A0A6J1E9D7 Protein yippee-like4.1e-4673.13Show/hide
Query:  KVDRLKGTTLHSFLSRERKKKKEGEAYPS-MADL-IRERLYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCC
        ++  LKGTTLH+F S   ++ + G    S MADL I  RLYSCQNC N+VSRHDDIISKGFQS+RGRAFLFYEA+NV EG QQEKML+SG YIV DLFC 
Subjt:  KVDRLKGTTLHSFLSRERKKKKEGEAYPS-MADL-IRERLYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCC

Query:  ECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITN
        ECGQ+LGWKYIKAYD++Q+YKEGKVVLEKFKITN
Subjt:  ECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITN

A0A6J1E9T8 Protein yippee-like1.7e-4467.36Show/hide
Query:  KVDRLKGTTLHSFLSRERKKKKEG-----------EAYPSMADL-IRERLYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISG
        ++  LKGTTLH+F S   ++ + G            +   MADL I  RLYSCQNC N+VSRHDDIISKGFQS+RGRAFLFYEA+NV EG QQEKML+SG
Subjt:  KVDRLKGTTLHSFLSRERKKKKEG-----------EAYPSMADL-IRERLYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISG

Query:  RYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITN
         YIV DLFC ECGQ+LGWKYIKAYD++Q+YKEGKVVLEKFKITN
Subjt:  RYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITN

A0A6J1ISW6 Protein yippee-like2.4e-4673.13Show/hide
Query:  KVDRLKGTTLHSFLSRERKKKKEGEAYPS-MADL-IRERLYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCC
        ++  LKGTTLH+FL    ++ + G    S MADL I  RLYSCQNC N+VSRHDDIISKGFQS+RGRAFLFYEA+NV EG QQEKML+SG YIV DLFC 
Subjt:  KVDRLKGTTLHSFLSRERKKKKEGEAYPS-MADL-IRERLYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCC

Query:  ECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITN
        ECGQ+LGWKYIKAYD++Q+YKEGKVVLEKFKITN
Subjt:  ECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITN

SwissProt top hitse value%identityAlignment
P59234 Protein yippee-like3.3e-2146.32Show/hide
Query:  RLYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKIT
        ++YSC++C   ++  ++I+SK F    G+A+LF +  NV  G  + +M+++G + V D+FC  CG I+GWKY  A++ SQKYKEGK VLE+FKIT
Subjt:  RLYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKIT

Q9C777 Protein yippee-like At3g112302.0e-2144.57Show/hide
Query:  YSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKI
        YSC++C+  ++  DD++SK FQS  G+A+LF +  NV  G ++++M+++G + V D++C +CG  +GWKY  A++ +QKYKEGK VLE++K+
Subjt:  YSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKI

Q9FN32 Protein yippee-like At5g539404.4e-2144.79Show/hide
Query:  RLYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITN
        R Y C+ CR  ++  DD++S+ F   RG+A+LF  + N+  G  +E++++SG + V D+FCC CGQ +GWKY  A++ +QKYKEGK VLE+ +I +
Subjt:  RLYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITN

Q9SR97 Protein yippee-like At3g089902.0e-2148.39Show/hide
Query:  LYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKI
        +YSC+ C+   +  +DIISK F    GRA+LF    NV  G ++ +++I+G + V D+FC  CG ++GWKY  AYD SQKYKEGK +LE+FK+
Subjt:  LYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKI

Q9T096 Protein yippee-like At4g277453.4e-2655.45Show/hide
Query:  MADLIRERLYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFK
        MA  I  RLYSC NCRN V  HDDIISK FQ   GRAFLF  A N+  G ++++ L++G + V D+ C +C + LGWKY +AY+ SQKYKEGK + EK K
Subjt:  MADLIRERLYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFK

Query:  I
        I
Subjt:  I

Arabidopsis top hitse value%identityAlignment
AT2G40110.1 Yippee family putative zinc-binding protein3.3e-2446.32Show/hide
Query:  RLYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKIT
        ++YSC++C+  ++ ++DIISK F    G+A+LF +  NV  G  +E+++++G++ V D+FC  CG I+GWKY  A++ +QKYKEGK VLE+FKI+
Subjt:  RLYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKIT

AT2G40110.2 Yippee family putative zinc-binding protein4.8e-2345.65Show/hide
Query:  RLYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKF
        ++YSC++C+  ++ ++DIISK F    G+A+LF +  NV  G  +E+++++G++ V D+FC  CG I+GWKY  A++ +QKYKEGK VLE+F
Subjt:  RLYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKF

AT3G08990.1 Yippee family putative zinc-binding protein1.4e-2248.39Show/hide
Query:  LYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKI
        +YSC+ C+   +  +DIISK F    GRA+LF    NV  G ++ +++I+G + V D+FC  CG ++GWKY  AYD SQKYKEGK +LE+FK+
Subjt:  LYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKI

AT3G11230.1 Yippee family putative zinc-binding protein1.4e-2244.57Show/hide
Query:  YSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKI
        YSC++C+  ++  DD++SK FQS  G+A+LF +  NV  G ++++M+++G + V D++C +CG  +GWKY  A++ +QKYKEGK VLE++K+
Subjt:  YSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFKI

AT4G27745.1 Yippee family putative zinc-binding protein2.4e-2755.45Show/hide
Query:  MADLIRERLYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFK
        MA  I  RLYSC NCRN V  HDDIISK FQ   GRAFLF  A N+  G ++++ L++G + V D+ C +C + LGWKY +AY+ SQKYKEGK + EK K
Subjt:  MADLIRERLYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFCCECGQILGWKYIKAYDDSQKYKEGKVVLEKFK

Query:  I
        I
Subjt:  I


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACTCAAAATCCCTGAATGATCGGCACCAATTGGCAAAAGTTGATCGTTTAAAAGGAACAACTTTACATAGCTTTCTGAGTAGAGAAAGAAAGAAAAAGAAAGAAGG
TGAGGCATATCCATCAATGGCGGATTTGATCAGAGAACGGCTTTACAGTTGCCAGAATTGCAGAAATCAAGTGTCAAGACATGATGACATAATTTCAAAAGGGTTTCAGT
CAGTGAGAGGAAGAGCGTTCTTGTTCTATGAAGCAAAGAATGTAAGAGAAGGAATTCAACAGGAGAAGATGTTAATAAGTGGAAGATATATAGTTTGTGATTTGTTTTGT
TGTGAGTGTGGACAAATCTTGGGTTGGAAATACATCAAGGCTTATGATGATTCACAGAAGTACAAAGAAGGCAAAGTGGTTTTGGAGAAGTTCAAGATCACAAATGCTTC
TTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCACTCAAAATCCCTGAATGATCGGCACCAATTGGCAAAAGTTGATCGTTTAAAAGGAACAACTTTACATAGCTTTCTGAGTAGAGAAAGAAAGAAAAAGAAAGAAGG
TGAGGCATATCCATCAATGGCGGATTTGATCAGAGAACGGCTTTACAGTTGCCAGAATTGCAGAAATCAAGTGTCAAGACATGATGACATAATTTCAAAAGGGTTTCAGT
CAGTGAGAGGAAGAGCGTTCTTGTTCTATGAAGCAAAGAATGTAAGAGAAGGAATTCAACAGGAGAAGATGTTAATAAGTGGAAGATATATAGTTTGTGATTTGTTTTGT
TGTGAGTGTGGACAAATCTTGGGTTGGAAATACATCAAGGCTTATGATGATTCACAGAAGTACAAAGAAGGCAAAGTGGTTTTGGAGAAGTTCAAGATCACAAATGCTTC
TTCCTAA
Protein sequenceShow/hide protein sequence
MHSKSLNDRHQLAKVDRLKGTTLHSFLSRERKKKKEGEAYPSMADLIRERLYSCQNCRNQVSRHDDIISKGFQSVRGRAFLFYEAKNVREGIQQEKMLISGRYIVCDLFC
CECGQILGWKYIKAYDDSQKYKEGKVVLEKFKITNASS