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Lsi05G021530 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G021530
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:28261434..28262414
RNA-Seq ExpressionLsi05G021530
SyntenyLsi05G021530
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4350388.1 hypothetical protein G4B88_030906 [Cannabis sativa]3.7e-0545.45Show/hide
Query:  MKFSSADRLN-----ADDFSVRNRSRSSTTIIDLPVQKKLEIRVIGDFEEVDIVYIIGEEIRHSGDEARFSSSGRAV
        MKFS+ D+L      A  F V+N SRSSTT+ D  V      R++GDF ++DIV+++ E+  H G+EA FSS+G +V
Subjt:  MKFSSADRLN-----ADDFSVRNRSRSSTTIIDLPVQKKLEIRVIGDFEEVDIVYIIGEEIRHSGDEARFSSSGRAV
KAF4350395.1 hypothetical protein G4B88_030913 [Cannabis sativa]8.0e-0847.83Show/hide
Query:  LFSLHNTPPDSTDSATDFLDPQSL--------SRRTTLPTLRRSPSVCNAEMTDLIARLGEFRFAIISSPISAGLKLAPRNRRVENGYERRY
        +FS   T   STDS+   + P+ L        S     P     P +C AEMTD  ARLG+ RF II+SPISA L+LAPRNRR ENG E R+
Subjt:  LFSLHNTPPDSTDSATDFLDPQSL--------SRRTTLPTLRRSPSVCNAEMTDLIARLGEFRFAIISSPISAGLKLAPRNRRVENGYERRY
TrEMBL top hitse value%identityAlignment
A0A7J6DW90 Uncharacterized protein3.9e-0847.83Show/hide
Query:  LFSLHNTPPDSTDSATDFLDPQSL--------SRRTTLPTLRRSPSVCNAEMTDLIARLGEFRFAIISSPISAGLKLAPRNRRVENGYERRY
        +FS   T   STDS+   + P+ L        S     P     P +C AEMTD  ARLG+ RF II+SPISA L+LAPRNRR ENG E R+
Subjt:  LFSLHNTPPDSTDSATDFLDPQSL--------SRRTTLPTLRRSPSVCNAEMTDLIARLGEFRFAIISSPISAGLKLAPRNRRVENGYERRY
A0A7J6DW91 Uncharacterized protein1.8e-0545.45Show/hide
Query:  MKFSSADRLN-----ADDFSVRNRSRSSTTIIDLPVQKKLEIRVIGDFEEVDIVYIIGEEIRHSGDEARFSSSGRAV
        MKFS+ D+L      A  F V+N SRSSTT+ D  V      R++GDF ++DIV+++ E+  H G+EA FSS+G +V
Subjt:  MKFSSADRLN-----ADDFSVRNRSRSSTTIIDLPVQKKLEIRVIGDFEEVDIVYIIGEEIRHSGDEARFSSSGRAV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGTTTTCGCTGCATAATACGCCGCCCGATTCGACGGATTCGGCGACGGACTTCCTCGACCCGCAGTCGCTCAGCCGCCGGACGACGTTGCCGACTCTCCGCCGGTC
GCCGTCGGTTTGCAACGCTGAGATGACCGATTTAATCGCTCGGCTAGGCGAGTTTCGGTTCGCGATCATCAGTTCGCCGATCTCGGCGGGGCTCAAACTGGCGCCGAGAA
ATCGCAGAGTGGAAAATGGATATGAACGTCGATACGGCCCGGTCGGAGAATCGCCGCACGATGTTAATATTCCGTCCATGAAGTTCAGCAGCGCTGATAGGCTCAACGCC
GACGATTTCTCGGTGAGAAACCGATCGAGATCCTCGACGACGATTATTGACTTGCCTGTGCAGAAGAAACTTGAGATCAGAGTCATCGGAGACTTTGAAGAGGTCGATAT
CGTATACATCATAGGAGAGGAAATTCGCCATAGCGGCGACGAAGCTCGATTTTCCAGTTCCGGAAGGGCCGTATAG
mRNA sequenceShow/hide mRNA sequence
ATGCTGTTTTCGCTGCATAATACGCCGCCCGATTCGACGGATTCGGCGACGGACTTCCTCGACCCGCAGTCGCTCAGCCGCCGGACGACGTTGCCGACTCTCCGCCGGTC
GCCGTCGGTTTGCAACGCTGAGATGACCGATTTAATCGCTCGGCTAGGCGAGTTTCGGTTCGCGATCATCAGTTCGCCGATCTCGGCGGGGCTCAAACTGGCGCCGAGAA
ATCGCAGAGTGGAAAATGGATATGAACGTCGATACGGCCCGGTCGGAGAATCGCCGCACGATGTTAATATTCCGTCCATGAAGTTCAGCAGCGCTGATAGGCTCAACGCC
GACGATTTCTCGGTGAGAAACCGATCGAGATCCTCGACGACGATTATTGACTTGCCTGTGCAGAAGAAACTTGAGATCAGAGTCATCGGAGACTTTGAAGAGGTCGATAT
CGTATACATCATAGGAGAGGAAATTCGCCATAGCGGCGACGAAGCTCGATTTTCCAGTTCCGGAAGGGCCGTATAG
Protein sequenceShow/hide protein sequence
MLFSLHNTPPDSTDSATDFLDPQSLSRRTTLPTLRRSPSVCNAEMTDLIARLGEFRFAIISSPISAGLKLAPRNRRVENGYERRYGPVGESPHDVNIPSMKFSSADRLNA
DDFSVRNRSRSSTTIIDLPVQKKLEIRVIGDFEEVDIVYIIGEEIRHSGDEARFSSSGRAV