CuGenDBv2

Gene ID	Lsi05G021560
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	DNA-directed RNA polymerase II subunit 1-like
Genome location	chr05:28279247..28282118
RNA-Seq Expression	Lsi05G021560
Synteny	Lsi05G021560
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7028529.1 hypothetical protein SDJN02_09710 [Cucurbita argyrosperma subsp. argyrosperma]

8.7e-77

58.73

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Query:  MANLPRIGRTRQRPSAVAPPVPAAAQPTAEPKSEILPFAPTIQTIQHLEPTSTPAPASPLRESRRPLPSPSKKATSPFASPKYGASLTRVDSPPAAKATR
        M+N PR G +RQRPS  APPV     P AE K E  PF    Q++Q                       P++K TSP ASPKYG S+TRV SPP  K   
Subjt:  MANLPRIGRTRQRPSAVAPPVPAAAQPTAEPKSEILPFAPTIQTIQHLEPTSTPAPASPLRESRRPLPSPSKKATSPFASPKYGASLTRVDSPPAAKATR

Query:  SPPDSPTNKYLERRKNGETTPPQSPAKSRQTKTPPLSPLALPRSQVISG-NGTTAQPRTQPVVETKGIVYNKAVEKPAKYDRPSEYGSGKSHQKQQAAAE
        SPP SP  KY +R    +T+P QSP++S +T  PP  PLALP +   +  N TT QPR QP VE K IVYNK VE+P K DR SEYGSGK H+KQ+ AAE
Subjt:  SPPDSPTNKYLERRKNGETTPPQSPAKSRQTKTPPLSPLALPRSQVISG-NGTTAQPRTQPVVETKGIVYNKAVEKPAKYDRPSEYGSGKSHQKQQAAAE

Query:  VINLNGHNVGAVMEINKSSDGYRLGGENVKKNETEGGG-GRHGHEEKKTGAKKEP--------PMTAFMNSNFQSVNNSVLYDSSCNHRDPGLHLAFSDA
         INL GHNVGAVMEI+KSS G+RLGGE V+KNETEGG  GR G EEKK   KKE         PMTAFMNSNFQSVNNSVLYDSSC+HRDPGLHL F+DA
Subjt:  VINLNGHNVGAVMEINKSSDGYRLGGENVKKNETEGGG-GRHGHEEKKTGAKKEP--------PMTAFMNSNFQSVNNSVLYDSSCNHRDPGLHLAFSDA

Query:  ADGDGATVDGHKTYK
        ADGDGA VDG K YK
Subjt:  ADGDGATVDGHKTYK

XP_004133797.1 uncharacterized protein LOC101205942 [Cucumis sativus]

4.6e-102

71.7

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Query:  MANLPRIGRTRQRPSAVAPPVPAAAQPTAEPKSEILPFAPTIQTIQHLEPTSTPAPASPLRESRRPLPSPSKKATSPFASPKYGASLTRVDSPPAAKATR
        MANLPR+GRTRQR S+V PPVPAAAQP  EPK E +P+A +I         +TPAPASP RES RPL SPSKKATSPFAS        RVDS PAAKATR
Subjt:  MANLPRIGRTRQRPSAVAPPVPAAAQPTAEPKSEILPFAPTIQTIQHLEPTSTPAPASPLRESRRPLPSPSKKATSPFASPKYGASLTRVDSPPAAKATR

Query:  SPPDSPTNKYLERRKNGETTPPQSPAKSRQTKTPPLSPLALPRSQVISGNGTTAQPRTQPVVETKGIVYNKAV-EKPAKYDRPSEYGSGKS-HQKQQAAA
        SPPDS  +KYLERR NGETTPP +PAKSR  KT PLSPLALPRSQVI+GNGTTAQPR QP VETKGIVYNKA  EKP+K +R SE+GSGKS HQKQQ   
Subjt:  SPPDSPTNKYLERRKNGETTPPQSPAKSRQTKTPPLSPLALPRSQVISGNGTTAQPRTQPVVETKGIVYNKAV-EKPAKYDRPSEYGSGKS-HQKQQAAA

Query:  EVINLNGHNVGAVMEINKSSDGYRLGGENVKKNETEGGG--GRHGHEEKKTGAKKEPPMTAFMNSNFQSVNNSVLYDSSCNHRDPGLHLAFSDAADGDGA
         V+ L GHNVGAVME+NKSS GYRLGGE +KK ETE  G    +GHE+KKTG KK+PP++AFMNSNFQSVNNS+L+DSSC HRDPGLHL+F +AADG GA
Subjt:  EVINLNGHNVGAVMEINKSSDGYRLGGENVKKNETEGGG--GRHGHEEKKTGAKKEPPMTAFMNSNFQSVNNSVLYDSSCNHRDPGLHLAFSDAADGDGA

Query:  TVDGHKTYKPK
         VDG K+YKPK
Subjt:  TVDGHKTYKPK

XP_008437851.1 PREDICTED: zyxin-like [Cucumis melo]

2.3e-109

74.92

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Query:  MANLPRIGRTRQRPSAVAPPVPAAAQPTAEPKSEILPFAPTIQTIQHLEPTSTPAPASPLRESRRPLPSPSKKATSPFASPKYGASLTRVDSPPAAKATR
        MANLPR GR RQR  AV PPVPAAAQP  EP+ +ILPFA TI         +TPAPASP RES RPL SP KKATSPFASPKYG S TR+D  PAAKAT 
Subjt:  MANLPRIGRTRQRPSAVAPPVPAAAQPTAEPKSEILPFAPTIQTIQHLEPTSTPAPASPLRESRRPLPSPSKKATSPFASPKYGASLTRVDSPPAAKATR

Query:  SPPDSPTNKYLERRKNGETTPPQSPAKSRQTKTPPLSPLALPRSQVISGNGTTAQPRTQPVVETKGIVYNKAVEKPAKYDRPS-EYGSGKSHQKQQAAAE
        SPPDS  +KY ERR NGETTPP SPAKSR+ KTPPLSPLALPR+QV +GNGTTAQPR QP VETKGIVYNK VEKP+K +R S EYGS KSHQK+Q   E
Subjt:  SPPDSPTNKYLERRKNGETTPPQSPAKSRQTKTPPLSPLALPRSQVISGNGTTAQPRTQPVVETKGIVYNKAVEKPAKYDRPS-EYGSGKSHQKQQAAAE

Query:  VINLNGHNVGAVMEINKSSDGYRLGGENVKKNETEGGGGRH--GHEEKKTGA-KKEPPMTAFMNSNFQSVNNSVLYDSSCNHRDPGLHLAFSDAADGDGA
        VI L GHNVGAVMEINKSS GYRLGGE +KKNETE  G  H  GHE+KKT   KKEPP+TAFMNSNFQSVNNS+L+DSSCNHRDPGLHLAF DA DGDGA
Subjt:  VINLNGHNVGAVMEINKSSDGYRLGGENVKKNETEGGGGRH--GHEEKKTGA-KKEPPMTAFMNSNFQSVNNSVLYDSSCNHRDPGLHLAFSDAADGDGA

Query:  TVDGHKTYKPK
         VDG K+YKPK
Subjt:  TVDGHKTYKPK

XP_022974816.1 wiskott-Aldrich syndrome protein family member 2-like [Cucurbita maxima]

6.4e-80

59.81

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Query:  MANLPRIGRTRQRPSAVAPPVPAAAQPTAEPKSEILPFAPTIQTIQHLEPTSTPAPASPLRESRRPLPSPSKKATSPFASPKYGASLTRVDSPPAAKATR
        M+N PR GR RQRPS  APPV     P AE K E LPF  T QT+Q                       P++K TSP ASPKYG S+T V SPP AK   
Subjt:  MANLPRIGRTRQRPSAVAPPVPAAAQPTAEPKSEILPFAPTIQTIQHLEPTSTPAPASPLRESRRPLPSPSKKATSPFASPKYGASLTRVDSPPAAKATR

Query:  SPPDSPTNKYLERRKNGETTPPQSPAKSRQTKTPPLSPLALPRSQVISGNGTTAQPRTQPVVETKGIVYNKAVEKPAKYDRPSEYGSGKSHQKQQAAAEV
        SPP SP  KY +R    +T+P QSP++S +T  PP  PLALP +   + +G T QPR Q  VE K IVYNK VEKP K DRP EYGSGKSH+KQ+  AE 
Subjt:  SPPDSPTNKYLERRKNGETTPPQSPAKSRQTKTPPLSPLALPRSQVISGNGTTAQPRTQPVVETKGIVYNKAVEKPAKYDRPSEYGSGKSHQKQQAAAEV

Query:  INLNGHNVGAVMEINKSSDGYRLGGENVKKNETEGG-GGRHGHEEKKTGAKKEP-----PMTAFMNSNFQSVNNSVLYDSSCNHRDPGLHLAFSDAADGD
        INL GHNVGAVMEI+K S  +RLGGE V+KN+TEGG GGR G+EEKK   KK+      PMTAFMNSNFQSVNNSVLYDSSCNHRDPGLHL F+DAADGD
Subjt:  INLNGHNVGAVMEINKSSDGYRLGGENVKKNETEGG-GGRHGHEEKKTGAKKEP-----PMTAFMNSNFQSVNNSVLYDSSCNHRDPGLHLAFSDAADGD

Query:  GATVDGHKTYK
        GA VDG K YK
Subjt:  GATVDGHKTYK

XP_038879417.1 proline-rich receptor-like protein kinase PERK8 [Benincasa hispida]

1.7e-125

81.05

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Query:  MANLPRIGRTRQRPSAVAPPVPAAAQPTAEPKSEILPFAPTIQTIQHLEPTSTPAPASPLRESRRPLPSPSKKATSPFASPKYGASLTRVDSPPAAKATR
        MANLPRIGRTRQRPSAVAPP+ AA QPTAEPK EI PFAPT    Q +EPT TPAPASPLR+S R + SP KKATSPFASPKYG SLTRVDSPPAAKATR
Subjt:  MANLPRIGRTRQRPSAVAPPVPAAAQPTAEPKSEILPFAPTIQTIQHLEPTSTPAPASPLRESRRPLPSPSKKATSPFASPKYGASLTRVDSPPAAKATR

Query:  SPPDSPTNKYLERRKNGETTPPQSPAKSRQTKTPPLSPLALPRSQVISGNGTTAQPRTQPVVETKGIVYNKAVEKPAKYDRPSEYGSGKSHQKQQAAAEV
        SPPDSPTNKYLE R NGETTPP SPAKSR+TKTPPLSPL LPR+ VIS + TTA PRTQPVVETKGIVYNKAVEKP K DRPSEYGSGK HQKQQA AEV
Subjt:  SPPDSPTNKYLERRKNGETTPPQSPAKSRQTKTPPLSPLALPRSQVISGNGTTAQPRTQPVVETKGIVYNKAVEKPAKYDRPSEYGSGKSHQKQQAAAEV

Query:  INLNGHNVGAVMEINKSSDGYRLGGENVKKNETEGGGGRHGHEEKKTGAKKEPPMTAFMNSNFQSVNNSVLYDSSCNHRDPGLHLAFSDAADGDGATVDG
        INLNGHNVGAVMEINKSSDGYRLGGE VK  ET+GGG  HGH+EK  GAK  PP+TAFMN+NFQS+NNS+LYDSSCNH DPGLHL+  ++ DGDGATV G
Subjt:  INLNGHNVGAVMEINKSSDGYRLGGENVKKNETEGGGGRHGHEEKKTGAKKEPPMTAFMNSNFQSVNNSVLYDSSCNHRDPGLHLAFSDAADGDGATVDG

Query:  HKTYKP
        HK+YKP
Subjt:  HKTYKP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L320 Uncharacterized protein

2.2e-102

71.7

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Query:  MANLPRIGRTRQRPSAVAPPVPAAAQPTAEPKSEILPFAPTIQTIQHLEPTSTPAPASPLRESRRPLPSPSKKATSPFASPKYGASLTRVDSPPAAKATR
        MANLPR+GRTRQR S+V PPVPAAAQP  EPK E +P+A +I         +TPAPASP RES RPL SPSKKATSPFAS        RVDS PAAKATR
Subjt:  MANLPRIGRTRQRPSAVAPPVPAAAQPTAEPKSEILPFAPTIQTIQHLEPTSTPAPASPLRESRRPLPSPSKKATSPFASPKYGASLTRVDSPPAAKATR

Query:  SPPDSPTNKYLERRKNGETTPPQSPAKSRQTKTPPLSPLALPRSQVISGNGTTAQPRTQPVVETKGIVYNKAV-EKPAKYDRPSEYGSGKS-HQKQQAAA
        SPPDS  +KYLERR NGETTPP +PAKSR  KT PLSPLALPRSQVI+GNGTTAQPR QP VETKGIVYNKA  EKP+K +R SE+GSGKS HQKQQ   
Subjt:  SPPDSPTNKYLERRKNGETTPPQSPAKSRQTKTPPLSPLALPRSQVISGNGTTAQPRTQPVVETKGIVYNKAV-EKPAKYDRPSEYGSGKS-HQKQQAAA

Query:  EVINLNGHNVGAVMEINKSSDGYRLGGENVKKNETEGGG--GRHGHEEKKTGAKKEPPMTAFMNSNFQSVNNSVLYDSSCNHRDPGLHLAFSDAADGDGA
         V+ L GHNVGAVME+NKSS GYRLGGE +KK ETE  G    +GHE+KKTG KK+PP++AFMNSNFQSVNNS+L+DSSC HRDPGLHL+F +AADG GA
Subjt:  EVINLNGHNVGAVMEINKSSDGYRLGGENVKKNETEGGG--GRHGHEEKKTGAKKEPPMTAFMNSNFQSVNNSVLYDSSCNHRDPGLHLAFSDAADGDGA

Query:  TVDGHKTYKPK
         VDG K+YKPK
Subjt:  TVDGHKTYKPK

A0A1S3AV38 zyxin-like

1.1e-109

74.92

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Query:  MANLPRIGRTRQRPSAVAPPVPAAAQPTAEPKSEILPFAPTIQTIQHLEPTSTPAPASPLRESRRPLPSPSKKATSPFASPKYGASLTRVDSPPAAKATR
        MANLPR GR RQR  AV PPVPAAAQP  EP+ +ILPFA TI         +TPAPASP RES RPL SP KKATSPFASPKYG S TR+D  PAAKAT 
Subjt:  MANLPRIGRTRQRPSAVAPPVPAAAQPTAEPKSEILPFAPTIQTIQHLEPTSTPAPASPLRESRRPLPSPSKKATSPFASPKYGASLTRVDSPPAAKATR

Query:  SPPDSPTNKYLERRKNGETTPPQSPAKSRQTKTPPLSPLALPRSQVISGNGTTAQPRTQPVVETKGIVYNKAVEKPAKYDRPS-EYGSGKSHQKQQAAAE
        SPPDS  +KY ERR NGETTPP SPAKSR+ KTPPLSPLALPR+QV +GNGTTAQPR QP VETKGIVYNK VEKP+K +R S EYGS KSHQK+Q   E
Subjt:  SPPDSPTNKYLERRKNGETTPPQSPAKSRQTKTPPLSPLALPRSQVISGNGTTAQPRTQPVVETKGIVYNKAVEKPAKYDRPS-EYGSGKSHQKQQAAAE

Query:  VINLNGHNVGAVMEINKSSDGYRLGGENVKKNETEGGGGRH--GHEEKKTGA-KKEPPMTAFMNSNFQSVNNSVLYDSSCNHRDPGLHLAFSDAADGDGA
        VI L GHNVGAVMEINKSS GYRLGGE +KKNETE  G  H  GHE+KKT   KKEPP+TAFMNSNFQSVNNS+L+DSSCNHRDPGLHLAF DA DGDGA
Subjt:  VINLNGHNVGAVMEINKSSDGYRLGGENVKKNETEGGGGRH--GHEEKKTGA-KKEPPMTAFMNSNFQSVNNSVLYDSSCNHRDPGLHLAFSDAADGDGA

Query:  TVDGHKTYKPK
         VDG K+YKPK
Subjt:  TVDGHKTYKPK

A0A5A7TZ24 Zyxin-like

1.1e-109

74.92

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Query:  MANLPRIGRTRQRPSAVAPPVPAAAQPTAEPKSEILPFAPTIQTIQHLEPTSTPAPASPLRESRRPLPSPSKKATSPFASPKYGASLTRVDSPPAAKATR
        MANLPR GR RQR  AV PPVPAAAQP  EP+ +ILPFA TI         +TPAPASP RES RPL SP KKATSPFASPKYG S TR+D  PAAKAT 
Subjt:  MANLPRIGRTRQRPSAVAPPVPAAAQPTAEPKSEILPFAPTIQTIQHLEPTSTPAPASPLRESRRPLPSPSKKATSPFASPKYGASLTRVDSPPAAKATR

Query:  SPPDSPTNKYLERRKNGETTPPQSPAKSRQTKTPPLSPLALPRSQVISGNGTTAQPRTQPVVETKGIVYNKAVEKPAKYDRPS-EYGSGKSHQKQQAAAE
        SPPDS  +KY ERR NGETTPP SPAKSR+ KTPPLSPLALPR+QV +GNGTTAQPR QP VETKGIVYNK VEKP+K +R S EYGS KSHQK+Q   E
Subjt:  SPPDSPTNKYLERRKNGETTPPQSPAKSRQTKTPPLSPLALPRSQVISGNGTTAQPRTQPVVETKGIVYNKAVEKPAKYDRPS-EYGSGKSHQKQQAAAE

Query:  VINLNGHNVGAVMEINKSSDGYRLGGENVKKNETEGGGGRH--GHEEKKTGA-KKEPPMTAFMNSNFQSVNNSVLYDSSCNHRDPGLHLAFSDAADGDGA
        VI L GHNVGAVMEINKSS GYRLGGE +KKNETE  G  H  GHE+KKT   KKEPP+TAFMNSNFQSVNNS+L+DSSCNHRDPGLHLAF DA DGDGA
Subjt:  VINLNGHNVGAVMEINKSSDGYRLGGENVKKNETEGGGGRH--GHEEKKTGA-KKEPPMTAFMNSNFQSVNNSVLYDSSCNHRDPGLHLAFSDAADGDGA

Query:  TVDGHKTYKPK
         VDG K+YKPK
Subjt:  TVDGHKTYKPK

A0A6J1GHE5 sulfated surface glycoprotein 185-like

9.4e-77

58.79

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Query:  MANLPRIGRTRQRPSAVAPPVPAAAQPTAEPKSEILPFAPTIQTIQHLEPTSTPAPASPLRESRRPLPSPSKKATSPFASPKYGASLTRVDSPPAAKATR
        M+N PR G +RQRPS  APPV     P AE K E  PF    Q++Q                       P++K TSP ASPKYG S+TRV SPP  K   
Subjt:  MANLPRIGRTRQRPSAVAPPVPAAAQPTAEPKSEILPFAPTIQTIQHLEPTSTPAPASPLRESRRPLPSPSKKATSPFASPKYGASLTRVDSPPAAKATR

Query:  SPPDSPTNKYLERRKNGETTPPQSPAKS-RQTKTPPLSPLALPRSQVISGNGTTAQPRTQPVVETKGIVYNKAVEKPAKYDRPSEYGSGKSHQKQQAAAE
        SPP SP  KY +R    +T+P QSP++S R +  PP  PLALP +Q  + N TT QPR QP VE K IVYNK VEK  K DRPSEYGSGK ++KQ+ A E
Subjt:  SPPDSPTNKYLERRKNGETTPPQSPAKS-RQTKTPPLSPLALPRSQVISGNGTTAQPRTQPVVETKGIVYNKAVEKPAKYDRPSEYGSGKSHQKQQAAAE

Query:  VINLNGHNVGAVMEINKSSDGYRLGGENVKKNETEGGGGRHGHEEKKTGAKKEP-------PMTAFMNSNFQSVNNSVLYDSSCNHRDPGLHLAFSDAAD
         INL GHNVGAVMEI+KSS G+RLGGE V+KNETE GGGR G+EEKK   KK+        PMTAFMNSNFQSVNNSVLYDSSC+HRDPGLHL F+DAAD
Subjt:  VINLNGHNVGAVMEINKSSDGYRLGGENVKKNETEGGGGRHGHEEKKTGAKKEP-------PMTAFMNSNFQSVNNSVLYDSSCNHRDPGLHLAFSDAAD

Query:  GDGATVDGHKTYK
        GDGA VDG K+YK
Subjt:  GDGATVDGHKTYK

A0A6J1ICG8 wiskott-Aldrich syndrome protein family member 2-like

3.1e-80

59.81

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Query:  MANLPRIGRTRQRPSAVAPPVPAAAQPTAEPKSEILPFAPTIQTIQHLEPTSTPAPASPLRESRRPLPSPSKKATSPFASPKYGASLTRVDSPPAAKATR
        M+N PR GR RQRPS  APPV     P AE K E LPF  T QT+Q                       P++K TSP ASPKYG S+T V SPP AK   
Subjt:  MANLPRIGRTRQRPSAVAPPVPAAAQPTAEPKSEILPFAPTIQTIQHLEPTSTPAPASPLRESRRPLPSPSKKATSPFASPKYGASLTRVDSPPAAKATR

Query:  SPPDSPTNKYLERRKNGETTPPQSPAKSRQTKTPPLSPLALPRSQVISGNGTTAQPRTQPVVETKGIVYNKAVEKPAKYDRPSEYGSGKSHQKQQAAAEV
        SPP SP  KY +R    +T+P QSP++S +T  PP  PLALP +   + +G T QPR Q  VE K IVYNK VEKP K DRP EYGSGKSH+KQ+  AE 
Subjt:  SPPDSPTNKYLERRKNGETTPPQSPAKSRQTKTPPLSPLALPRSQVISGNGTTAQPRTQPVVETKGIVYNKAVEKPAKYDRPSEYGSGKSHQKQQAAAEV

Query:  INLNGHNVGAVMEINKSSDGYRLGGENVKKNETEGG-GGRHGHEEKKTGAKKEP-----PMTAFMNSNFQSVNNSVLYDSSCNHRDPGLHLAFSDAADGD
        INL GHNVGAVMEI+K S  +RLGGE V+KN+TEGG GGR G+EEKK   KK+      PMTAFMNSNFQSVNNSVLYDSSCNHRDPGLHL F+DAADGD
Subjt:  INLNGHNVGAVMEINKSSDGYRLGGENVKKNETEGG-GGRHGHEEKKTGAKKEP-----PMTAFMNSNFQSVNNSVLYDSSCNHRDPGLHLAFSDAADGD

Query:  GATVDGHKTYK
        GA VDG K YK
Subjt:  GATVDGHKTYK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G46630.1 unknown protein

3.1e-16

29.12

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Query:  RPSAVAPPVPAAAQPTAEPKSEILPFAPTIQTIQHLEPTSTPAPASPLRESRRPLPSPSKKATSPFASPKYGA-----SLTRVDSPPAAKAT------RS
        RP A  P  P   QP + P+ +  P +P  Q  Q L P    AP +   + R P  SP  +  SP   PK          +   SPP+ K        R 
Subjt:  RPSAVAPPVPAAAQPTAEPKSEILPFAPTIQTIQHLEPTSTPAPASPLRESRRPLPSPSKKATSPFASPKYGA-----SLTRVDSPPAAKAT------RS

Query:  PPDSPTNKYLERRKNGETTPPQSPAKSRQTKTPP----LSPLALPRSQVISGNGTTAQ-----PRTQPVVETK--GIVYNKAVEKPAKYDRPSEYGSGKS
        P   P+  +  R    E+   +SP++S   +  P    LSP +LP S + S   TT +      +T    ET      +N    +   Y++   Y   ++
Subjt:  PPDSPTNKYLERRKNGETTPPQSPAKSRQTKTPP----LSPLALPRSQVISGNGTTAQ-----PRTQPVVETK--GIVYNKAVEKPAKYDRPSEYGSGKS

Query:  HQ--------KQQAAAE--------VINLNGHNVGAVMEINKSSDGYRLGGENVKKNETEGGGGRHGH-------------EEKKTGAKKEP-------P
        HQ        +Q ++++        VI + G N GAVMEI +S  G + GG     +    G G  G              E KK   K  P       P
Subjt:  HQ--------KQQAAAE--------VINLNGHNVGAVMEINKSSDGYRLGGENVKKNETEGGGGRHGH-------------EEKKTGAKKEP-------P

Query:  MTAFMNSNFQSVNNSVLYDSSCNHRDPGLHLAFSDAADGD
        M AFMNSN Q +NNS++Y+S+ +H DPG+HL  S     D
Subjt:  MTAFMNSNFQSVNNSVLYDSSCNHRDPGLHLAFSDAADGD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCAAATCTTCCTCGCATTGGCCGTACACGGCAACGTCCTTCTGCGGTGGCGCCGCCTGTTCCCGCCGCCGCACAGCCTACTGCAGAACCGAAGTCTGAAATTCTGCC
GTTTGCTCCGACCATTCAAACTATTCAACATTTAGAACCCACCAGTACGCCGGCACCGGCTTCTCCTCTGAGAGAATCCCGCCGCCCGCTTCCCTCTCCGTCGAAGAAAG
CCACGTCACCTTTTGCGTCGCCAAAATATGGAGCTTCTCTCACACGTGTGGACAGCCCGCCGGCGGCGAAGGCCACACGGTCGCCTCCGGATTCGCCTACGAACAAATAT
TTGGAGAGGAGGAAAAATGGGGAAACAACTCCACCTCAGTCGCCGGCCAAGTCCCGGCAAACAAAGACGCCGCCACTTTCTCCGCTTGCGCTGCCACGTAGCCAAGTGAT
CTCCGGGAATGGGACTACGGCTCAACCCAGGACTCAACCGGTGGTAGAGACGAAAGGCATTGTATACAACAAGGCCGTTGAGAAGCCGGCAAAGTATGATCGCCCATCGG
AGTACGGCTCCGGCAAGTCACACCAAAAGCAGCAGGCGGCCGCGGAGGTTATAAATCTCAATGGACATAACGTCGGCGCCGTCATGGAAATAAATAAGTCATCCGACGGC
TACCGTTTGGGCGGAGAAAACGTAAAAAAGAACGAAACAGAAGGCGGCGGCGGCCGCCATGGACATGAAGAGAAGAAAACGGGGGCAAAGAAGGAACCACCGATGACCGC
ATTTATGAACAGTAACTTTCAGAGTGTAAACAATTCGGTTCTGTACGACTCGTCGTGCAACCACCGTGATCCCGGCCTGCATCTCGCGTTTTCCGATGCAGCAGACGGCG
ACGGAGCTACTGTTGACGGCCATAAAACTTACAAGCCCAAGCCCAAGCCCCAGTGA

mRNA sequence

Show/hide mRNA sequence

CTTCTCTCATAATTTTCAACTTCCACAATATAAATAAATTGCTAAGACATAAGGCTTTTTAATATATCTCTAATTCTCTGCCACCTTTTTTTCTTTCTTTCTATTCTATT
CTATTTGAATTTTCATTTTCTTTTCTACAAAAATATTATGGCAAATCTTCCTCGCATTGGCCGTACACGGCAACGTCCTTCTGCGGTGGCGCCGCCTGTTCCCGCCGCCG
CACAGCCTACTGCAGAACCGAAGTCTGAAATTCTGCCGTTTGCTCCGACCATTCAAACTATTCAACATTTAGAACCCACCAGTACGCCGGCACCGGCTTCTCCTCTGAGA
GAATCCCGCCGCCCGCTTCCCTCTCCGTCGAAGAAAGCCACGTCACCTTTTGCGTCGCCAAAATATGGAGCTTCTCTCACACGTGTGGACAGCCCGCCGGCGGCGAAGGC
CACACGGTCGCCTCCGGATTCGCCTACGAACAAATATTTGGAGAGGAGGAAAAATGGGGAAACAACTCCACCTCAGTCGCCGGCCAAGTCCCGGCAAACAAAGACGCCGC
CACTTTCTCCGCTTGCGCTGCCACGTAGCCAAGTGATCTCCGGGAATGGGACTACGGCTCAACCCAGGACTCAACCGGTGGTAGAGACGAAAGGCATTGTATACAACAAG
GCCGTTGAGAAGCCGGCAAAGTATGATCGCCCATCGGAGTACGGCTCCGGCAAGTCACACCAAAAGCAGCAGGCGGCCGCGGAGGTTATAAATCTCAATGGACATAACGT
CGGCGCCGTCATGGAAATAAATAAGTCATCCGACGGCTACCGTTTGGGCGGAGAAAACGTAAAAAAGAACGAAACAGAAGGCGGCGGCGGCCGCCATGGACATGAAGAGA
AGAAAACGGGGGCAAAGAAGGAACCACCGATGACCGCATTTATGAACAGTAACTTTCAGAGTGTAAACAATTCGGTTCTGTACGACTCGTCGTGCAACCACCGTGATCCC
GGCCTGCATCTCGCGTTTTCCGATGCAGCAGACGGCGACGGAGCTACTGTTGACGGCCATAAAACTTACAAGCCCAAGCCCAAGCCCCAGTGAGGATTGGACCGAAAAGT
ACTATTTATATGAAATAAGCTGATTATGGGTTGTATCGATAATTATGCAAGCATTAATAAAATATATATTATGAGAAATTTCCTTTTAAAAATACATAGGTTAAATTATA
AAAAATAATTTTGTATTTTGTTTA

Protein sequence

Show/hide protein sequence

MANLPRIGRTRQRPSAVAPPVPAAAQPTAEPKSEILPFAPTIQTIQHLEPTSTPAPASPLRESRRPLPSPSKKATSPFASPKYGASLTRVDSPPAAKATRSPPDSPTNKY
LERRKNGETTPPQSPAKSRQTKTPPLSPLALPRSQVISGNGTTAQPRTQPVVETKGIVYNKAVEKPAKYDRPSEYGSGKSHQKQQAAAEVINLNGHNVGAVMEINKSSDG
YRLGGENVKKNETEGGGGRHGHEEKKTGAKKEPPMTAFMNSNFQSVNNSVLYDSSCNHRDPGLHLAFSDAADGDGATVDGHKTYKPKPKPQ

Lsi05G021560 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome