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Lsi05G021640 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G021640
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAuxin-responsive family protein
Genome locationchr05:28364395..28365415
RNA-Seq ExpressionLsi05G021640
SyntenyLsi05G021640
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048857.1 auxin-responsive family protein [Cucumis melo var. makuwa]1.8e-5092.59Show/hide
Query:  MGGGERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHQHHNY---HH
        MGGGERRRQSGAAVPKGCLAV+VGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRH HH++   HH
Subjt:  MGGGERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHQHHNY---HH

Query:  VGCFRVSF
        +GCFRVSF
Subjt:  VGCFRVSF

KAE8650220.1 hypothetical protein Csa_011388 [Cucumis sativus]1.1e-4787.16Show/hide
Query:  MGGGERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHQH------HN
        MGGGERRRQS A VPKGCLAV+VGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRH H      H+
Subjt:  MGGGERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHQH------HN

Query:  YHHVGCFRV
        +HH+GCFR+
Subjt:  YHHVGCFRV

XP_004133791.1 auxin-responsive protein SAUR32 [Cucumis sativus]5.8e-4988.29Show/hide
Query:  MGGGERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHQH------HN
        MGGGERRRQS A VPKGCLAV+VGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRH H      H+
Subjt:  MGGGERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHQH------HN

Query:  YHHVGCFRVSF
        +HH+GCFRVSF
Subjt:  YHHVGCFRVSF

XP_022924405.1 auxin-responsive protein SAUR32-like [Cucurbita moschata]1.9e-4793.4Show/hide
Query:  MGGGERRRQ-SGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHQHHNYHHVG
        MGGGERRRQ SGA VPKGCLAVRVGQK EEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRH H   HHVG
Subjt:  MGGGERRRQ-SGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHQHHNYHHVG

Query:  CFRVSF
        CFRVSF
Subjt:  CFRVSF

XP_038900878.1 auxin-responsive protein SAUR32-like [Benincasa hispida]2.3e-5095.24Show/hide
Query:  MGGGERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHQHHNYHHVGC
        MGGGERRRQS AAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRH HH++HH+GC
Subjt:  MGGGERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHQHHNYHHVGC

Query:  FRVSF
        FRVSF
Subjt:  FRVSF

TrEMBL top hitse value%identityAlignment
A0A0A0L5S7 Uncharacterized protein2.8e-4988.29Show/hide
Query:  MGGGERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHQH------HN
        MGGGERRRQS A VPKGCLAV+VGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRH H      H+
Subjt:  MGGGERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHQH------HN

Query:  YHHVGCFRVSF
        +HH+GCFRVSF
Subjt:  YHHVGCFRVSF

A0A5D3DBZ9 Auxin-responsive family protein8.7e-5192.59Show/hide
Query:  MGGGERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHQHHNY---HH
        MGGGERRRQSGAAVPKGCLAV+VGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRH HH++   HH
Subjt:  MGGGERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHQHHNY---HH

Query:  VGCFRVSF
        +GCFRVSF
Subjt:  VGCFRVSF

A0A6J1EEX5 auxin-responsive protein SAUR32-like9.0e-4893.4Show/hide
Query:  MGGGERRRQ-SGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHQHHNYHHVG
        MGGGERRRQ SGA VPKGCLAVRVGQK EEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRH H   HHVG
Subjt:  MGGGERRRQ-SGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHQHHNYHHVG

Query:  CFRVSF
        CFRVSF
Subjt:  CFRVSF

A0A6J1ICI8 auxin-responsive protein SAUR32-like7.9e-4484.26Show/hide
Query:  MGGGER---RRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHQHHNYHH
        MGGGER   R+ S  AVP+GCLAV+VGQ+GE+QQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTI IPCHVEEFRHVQ MIDRENSFHRR  HHN+HH
Subjt:  MGGGER---RRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHQHHNYHH

Query:  VGCFRVSF
        +GCFRVSF
Subjt:  VGCFRVSF

A0A6J1IWQ0 auxin-responsive protein SAUR32-like3.4e-4792.45Show/hide
Query:  MGGGERRR-QSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHQHHNYHHVG
        M GG+RRR  SGAAVPKGCLAVRVGQK EEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRH HH  HHVG
Subjt:  MGGGERRR-QSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHQHHNYHHVG

Query:  CFRVSF
        CFRVSF
Subjt:  CFRVSF

SwissProt top hitse value%identityAlignment
O22150 Auxin-responsive protein SAUR362.4e-1352.24Show/hide
Query:  VPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMI
        VP+G LA+ VGQK  +  R +VP++YFNHP F +LL+EAE+EYGF  +G I IPC   +F  V+  I
Subjt:  VPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMI

P33081 Auxin-induced protein 15A5.5e-1043.04Show/hide
Query:  GERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ-KGTIAIPCHVEEFRHVQGMID
        G R+    A  PKG LAV VG+K    +RFV+PV Y N P F  LL +AEEE+G+D   G + IPC  + F+ +   ++
Subjt:  GERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ-KGTIAIPCHVEEFRHVQGMID

P33082 Auxin-induced protein X153.2e-1045.95Show/hide
Query:  GERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ-KGTIAIPCHVEEFRHV
        G R+  +    PKG LAV VG+K    +RFV+PV Y N P F  LL +AEEE+G+D   G + IPC  E F+ +
Subjt:  GERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ-KGTIAIPCHVEEFRHV

Q41220 Auxin-responsive protein SAUR152.9e-1140.74Show/hide
Query:  MGGGERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ-KGTIAIPCHVEEFRHVQGMI
        +G  +  R+  ++ P+G +AV VG+  ++++R+VVPV Y N P F QLL ++EEE+G+D   G + IPCH   F  V   I
Subjt:  MGGGERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ-KGTIAIPCHVEEFRHVQGMI

Q9ZUZ3 Auxin-responsive protein SAUR324.6e-3362.5Show/hide
Query:  MGGGER--------RRQSGAA--VPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRH
        MG GE+        R+QS     VPKGCLA++VG +GEEQQRF+VPV+YFNHP FMQLLKEAE+EYGFDQKGTI IPCHVEEFR+VQ +ID E S +  +
Subjt:  MGGGER--------RRQSGAA--VPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRH

Query:  QHHN-------YHH-VGCFR
         HH+       YHH VGCFR
Subjt:  QHHN-------YHH-VGCFR

Arabidopsis top hitse value%identityAlignment
AT2G46690.1 SAUR-like auxin-responsive protein family3.3e-3462.5Show/hide
Query:  MGGGER--------RRQSGAA--VPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRH
        MG GE+        R+QS     VPKGCLA++VG +GEEQQRF+VPV+YFNHP FMQLLKEAE+EYGFDQKGTI IPCHVEEFR+VQ +ID E S +  +
Subjt:  MGGGER--------RRQSGAA--VPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRH

Query:  QHHN-------YHH-VGCFR
         HH+       YHH VGCFR
Subjt:  QHHN-------YHH-VGCFR

AT3G60690.1 SAUR-like auxin-responsive protein family6.2e-1748.81Show/hide
Query:  GGERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSF
        G E  R+    VPKG  AV +G+K  + QR +VP++YFNHP F +LL+EAEEE+GF Q+G I IPC   +F+ VQ  I+  + F
Subjt:  GGERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSF

AT3G61900.1 SAUR-like auxin-responsive protein family2.4e-2979.17Show/hide
Query:  VPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENS
        VPKGCLA++VG K EE+QRFVVPV YFNHP FMQLL+EAEEEYGF+QKGTI IPCHVE FR+VQ MI+RE S
Subjt:  VPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENS

AT4G00880.1 SAUR-like auxin-responsive protein family1.1e-3270.83Show/hide
Query:  VPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDREN------SFHRRHQHHNYHHVGCFRV
        VPKGCLAV+VGQ GEEQ+RFV+PVMYFNHP F QLLKEAEEE+GF QKGTI IPCHVEEFR+VQG+IDREN      +    H HH+ H + CFRV
Subjt:  VPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDREN------SFHRRHQHHNYHHVGCFRV

AT5G53590.1 SAUR-like auxin-responsive protein family3.7e-2252.53Show/hide
Query:  VPKGCLAVRVGQKGEEQ--QRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHQH-------HNYH--HVGCF
        VPKGC+A+ VG + +E+   RFVVP+++ +HP F+ LLKEAE+EYGF   G I IPC V+EF+HVQ +ID E   HRRH H       HN+H  H+ CF
Subjt:  VPKGCLAVRVGQKGEEQ--QRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHQH-------HNYH--HVGCF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGGCGGAGAGAGACGACGGCAGTCCGGCGCCGCCGTTCCGAAAGGGTGTTTGGCAGTGAGAGTGGGGCAGAAAGGGGAAGAGCAGCAGAGATTTGTGGTGCCGGT
GATGTACTTCAATCACCCGCGGTTCATGCAATTACTGAAAGAGGCGGAGGAAGAGTACGGATTTGATCAGAAGGGGACCATCGCGATTCCTTGTCACGTGGAGGAGTTTC
GGCACGTGCAGGGCATGATTGACCGTGAAAATTCATTCCACCGCCGTCATCAACACCACAACTACCACCACGTCGGTTGCTTTCGGGTTTCATTCTGA
mRNA sequenceShow/hide mRNA sequence
AATGAAATGAAAGAAGTGGATGCTTTGATGGGAAGGGCAGACCCACTTCCACTTTGTATGGTTTCTAATTGACTCCCAAATTCCTATATAACCAAACCCTAATTTCCTCT
CTGTGTAAAGTAATTTAATTAACAGAGACCAGAGTCATGGCAATCCCCAATTACTCTCCAAATCCGACGTCGTTTTACACTCTCTCACTTCCTCCCATTACTCCCTCAGA
TCCCTGGCCTTTTCCCCTCTGAACTTCAAATTCCCCAAAATTCCAAACCCCCTTCTCATTTTCTGATCCTTTTTATCCGATTATTTATAATATATTTATCGTCGTGAGAA
TGGGCGGCGGAGAGAGACGACGGCAGTCCGGCGCCGCCGTTCCGAAAGGGTGTTTGGCAGTGAGAGTGGGGCAGAAAGGGGAAGAGCAGCAGAGATTTGTGGTGCCGGTG
ATGTACTTCAATCACCCGCGGTTCATGCAATTACTGAAAGAGGCGGAGGAAGAGTACGGATTTGATCAGAAGGGGACCATCGCGATTCCTTGTCACGTGGAGGAGTTTCG
GCACGTGCAGGGCATGATTGACCGTGAAAATTCATTCCACCGCCGTCATCAACACCACAACTACCACCACGTCGGTTGCTTTCGGGTTTCATTCTGAGTCCTTTTGGGAG
TATTCCACTCTGTAATCCTAACAAAACTTCAATCTATATATACAAAATCAAATTTGCATTTGCTTAAGAAAGAAAAGAAAAAAACTTTGTGCAAATTTATCTTTGTTCAT
ATCTCCCAATACGAGCGTCGTTCAGTAATTAATTTTCATCAAAACTTATACCTCCATATCTTTGTTGACTGTTGTGCTTATACTTCAAGAAAAAAAAGGGAATGATCAGG
CATCGGTAACCTAATCATATGCATCTCTTTTTTTTTTTTTTATAAAAAAT
Protein sequenceShow/hide protein sequence
MGGGERRRQSGAAVPKGCLAVRVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHQHHNYHHVGCFRVSF