; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G021660 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G021660
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionrho GTPase-activating protein 5
Genome locationchr05:28377187..28377666
RNA-Seq ExpressionLsi05G021660
SyntenyLsi05G021660
Gene Ontology termsGO:0007165 - signal transduction (biological process)
GO:0009664 - plant-type cell wall organization (biological process)
GO:0050790 - regulation of catalytic activity (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0009531 - secondary cell wall (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005096 - GTPase activator activity (molecular function)
GO:0019706 - protein-cysteine S-palmitoyltransferase activity (molecular function)
InterPro domainsIPR000095 - CRIB domain
IPR036936 - CRIB domain superfamily
IPR044785 - Rho GTPase-activating protein 1-5


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048856.1 rho GTPase-activating protein 5 [Cucumis melo var. makuwa]8.9e-7894.3Show/hide
Query:  MTRLFRSKSCGHVRVAEFKPPPPPPTSYYDSDDEEEEEEEEEEEEDDYYGDGVAIGVNENGYGLVLRNSVCDSDEDKQEGATRHSNNGNQFPILDILVTA
        MTRLFRSKSCGHVRV+EFKPPPPPP+SYYDSDDEEEEEEEEEEE+DDYYGDGV I VNEN +GLVLRNSVCDSDE+KQEGATR SNNGNQFPILDILVTA
Subjt:  MTRLFRSKSCGHVRVAEFKPPPPPPTSYYDSDDEEEEEEEEEEEEDDYYGDGVAIGVNENGYGLVLRNSVCDSDEDKQEGATRHSNNGNQFPILDILVTA

Query:  LRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA
        LRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA
Subjt:  LRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA

XP_008437842.1 PREDICTED: rho GTPase-activating protein 5 [Cucumis melo]8.9e-7894.3Show/hide
Query:  MTRLFRSKSCGHVRVAEFKPPPPPPTSYYDSDDEEEEEEEEEEEEDDYYGDGVAIGVNENGYGLVLRNSVCDSDEDKQEGATRHSNNGNQFPILDILVTA
        MTRLFRSKSCGHVRV+EFKPPPPPP+SYYDSDDEEEEEEEEEEE+DDYYGDGV I VNEN +GLVLRNSVCDSDE+KQEGATR SNNGNQFPILDILVTA
Subjt:  MTRLFRSKSCGHVRVAEFKPPPPPPTSYYDSDDEEEEEEEEEEEEDDYYGDGVAIGVNENGYGLVLRNSVCDSDEDKQEGATRHSNNGNQFPILDILVTA

Query:  LRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA
        LRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA
Subjt:  LRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA

XP_022925659.1 rho GTPase-activating protein 3-like [Cucurbita moschata]3.3e-7289.38Show/hide
Query:  MTRLFRSKSCGHVRVAEFKPPPPPPTSYYDSDDEEEEEEEEEEEE--DDYYGDGVAIGVNENGYGLVLRNSVCDSDEDKQEGATRHSNNGNQFPILDILV
        MTRLFRSKSCGHV   +FKPPPPPP+SYYDSDDEEEEEEEEEEEE  DDYYGDGV + VNENGYGLVLRNS+ DSDEDKQE AT+HSNNGNQF ILDILV
Subjt:  MTRLFRSKSCGHVRVAEFKPPPPPPTSYYDSDDEEEEEEEEEEEE--DDYYGDGVAIGVNENGYGLVLRNSVCDSDEDKQEGATRHSNNGNQFPILDILV

Query:  TALRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA
        TALRKSLVTCSVE DDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTR PSA
Subjt:  TALRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA

XP_031738976.1 rho GTPase-activating protein 5 [Cucumis sativus]1.1e-7894.94Show/hide
Query:  MTRLFRSKSCGHVRVAEFKPPPPPPTSYYDSDDEEEEEEEEEEEEDDYYGDGVAIGVNENGYGLVLRNSVCDSDEDKQEGATRHSNNGNQFPILDILVTA
        MTRLFRSKSCGHVRV+EFKPPPPPP+SYYDSDDEEEEEEEEEEE+DDYYGDGV I VNENG+GLVLRNSVCDSDE+KQEGATR SNNGNQFPILDILVTA
Subjt:  MTRLFRSKSCGHVRVAEFKPPPPPPTSYYDSDDEEEEEEEEEEEEDDYYGDGVAIGVNENGYGLVLRNSVCDSDEDKQEGATRHSNNGNQFPILDILVTA

Query:  LRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA
        LRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA
Subjt:  LRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA

XP_038874641.1 rho GTPase-activating protein 5-like [Benincasa hispida]2.8e-7995.62Show/hide
Query:  MTRLFRSKSCGHVRVAEFKPPPPPPTSYYDSDDEEEEEEEEEEEE--DDYYGDGVAIGVNENGYGLVLRNSVCDSDEDKQEGATRHSNNGNQFPILDILV
        MTRLFRSKSCGHVRVAEFKPPPPPP+SYYDSDDEEEEEEEEEEEE  DDYYGDGV IGVNE+G+GLVLRNSVCDSDEDKQEGATRH+NNGNQFPILDILV
Subjt:  MTRLFRSKSCGHVRVAEFKPPPPPPTSYYDSDDEEEEEEEEEEEE--DDYYGDGVAIGVNENGYGLVLRNSVCDSDEDKQEGATRHSNNGNQFPILDILV

Query:  TALRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA
        TALRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA
Subjt:  TALRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA

TrEMBL top hitse value%identityAlignment
A0A0A0L3Q8 Uncharacterized protein5.1e-7994.94Show/hide
Query:  MTRLFRSKSCGHVRVAEFKPPPPPPTSYYDSDDEEEEEEEEEEEEDDYYGDGVAIGVNENGYGLVLRNSVCDSDEDKQEGATRHSNNGNQFPILDILVTA
        MTRLFRSKSCGHVRV+EFKPPPPPP+SYYDSDDEEEEEEEEEEE+DDYYGDGV I VNENG+GLVLRNSVCDSDE+KQEGATR SNNGNQFPILDILVTA
Subjt:  MTRLFRSKSCGHVRVAEFKPPPPPPTSYYDSDDEEEEEEEEEEEEDDYYGDGVAIGVNENGYGLVLRNSVCDSDEDKQEGATRHSNNGNQFPILDILVTA

Query:  LRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA
        LRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA
Subjt:  LRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA

A0A1S3AUL8 rho GTPase-activating protein 54.3e-7894.3Show/hide
Query:  MTRLFRSKSCGHVRVAEFKPPPPPPTSYYDSDDEEEEEEEEEEEEDDYYGDGVAIGVNENGYGLVLRNSVCDSDEDKQEGATRHSNNGNQFPILDILVTA
        MTRLFRSKSCGHVRV+EFKPPPPPP+SYYDSDDEEEEEEEEEEE+DDYYGDGV I VNEN +GLVLRNSVCDSDE+KQEGATR SNNGNQFPILDILVTA
Subjt:  MTRLFRSKSCGHVRVAEFKPPPPPPTSYYDSDDEEEEEEEEEEEEDDYYGDGVAIGVNENGYGLVLRNSVCDSDEDKQEGATRHSNNGNQFPILDILVTA

Query:  LRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA
        LRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA
Subjt:  LRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA

A0A5A7U3N8 S-acyltransferase4.3e-7894.3Show/hide
Query:  MTRLFRSKSCGHVRVAEFKPPPPPPTSYYDSDDEEEEEEEEEEEEDDYYGDGVAIGVNENGYGLVLRNSVCDSDEDKQEGATRHSNNGNQFPILDILVTA
        MTRLFRSKSCGHVRV+EFKPPPPPP+SYYDSDDEEEEEEEEEEE+DDYYGDGV I VNEN +GLVLRNSVCDSDE+KQEGATR SNNGNQFPILDILVTA
Subjt:  MTRLFRSKSCGHVRVAEFKPPPPPPTSYYDSDDEEEEEEEEEEEEDDYYGDGVAIGVNENGYGLVLRNSVCDSDEDKQEGATRHSNNGNQFPILDILVTA

Query:  LRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA
        LRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA
Subjt:  LRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA

A0A6J1CZR5 rho GTPase-activating protein 3-like1.3e-6986.08Show/hide
Query:  MTRLFRSKSCGHVRVAEFKPPPPPPTSYYDSDDEEEEEEEEEEEEDDYYGDGVAIGVNENGYGLVLRNSVCDSDEDKQEGATRHSNNGNQFPILDILVTA
        MTRLFRSKSCGHVR+AEFKPPPPPP+SYYDSDDE+E EE+EEEEEDDYY DGV  GVNENGYG++LRNSV D++++K+E ATRH NNGNQFPILDILVTA
Subjt:  MTRLFRSKSCGHVRVAEFKPPPPPPTSYYDSDDEEEEEEEEEEEEDDYYGDGVAIGVNENGYGLVLRNSVCDSDEDKQEGATRHSNNGNQFPILDILVTA

Query:  LRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA
        LRKSL+TCSVE DDV SMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPE+PTRVPSA
Subjt:  LRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA

A0A6J1ECU1 rho GTPase-activating protein 3-like1.6e-7289.38Show/hide
Query:  MTRLFRSKSCGHVRVAEFKPPPPPPTSYYDSDDEEEEEEEEEEEE--DDYYGDGVAIGVNENGYGLVLRNSVCDSDEDKQEGATRHSNNGNQFPILDILV
        MTRLFRSKSCGHV   +FKPPPPPP+SYYDSDDEEEEEEEEEEEE  DDYYGDGV + VNENGYGLVLRNS+ DSDEDKQE AT+HSNNGNQF ILDILV
Subjt:  MTRLFRSKSCGHVRVAEFKPPPPPPTSYYDSDDEEEEEEEEEEEE--DDYYGDGVAIGVNENGYGLVLRNSVCDSDEDKQEGATRHSNNGNQFPILDILV

Query:  TALRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA
        TALRKSLVTCSVE DDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTR PSA
Subjt:  TALRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA

SwissProt top hitse value%identityAlignment
F4JI46 Rho GTPase-activating protein 25.9e-1644.23Show/hide
Query:  RNSVCDSDEDKQEGATRHSNNGNQFPILDILVTALRKSLVTCSVE--PDD----------VSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTR
        R S  + +E++++       N  Q  +++ L+TALRKS+V+C V+   DD          V  M+I  P NVRH++HVTFDRF+GFLGLP E + E+P R
Subjt:  RNSVCDSDEDKQEGATRHSNNGNQFPILDILVTALRKSLVTCSVE--PDD----------VSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTR

Query:  VPSA
        VPSA
Subjt:  VPSA

Q6NKT5 Rho GTPase-activating protein 52.3e-1273.17Show/hide
Query:  MDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA
        MDI  P N+RHV+HVTFDRF+GFLGLP+EFEP+VP + PSA
Subjt:  MDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA

Q8GYY5 Rho GTPase-activating protein 33.6e-2141.72Show/hide
Query:  MTRLFRSKSCGHVRVAEFKPPPPPPTSYYD-SDDEEEEEEEEEEEEDDYYGDGVAIGVNENGYGLVLRNSVCDSDEDKQEGATRHSNNGNQFPILDILVT
        MT   RSKS G +   EFKP  P P  Y +  +D++E EE       DYY     +  + +  G                    + +   Q  ++D+L  
Subjt:  MTRLFRSKSCGHVRVAEFKPPPPPPTSYYD-SDDEEEEEEEEEEEEDDYYGDGVAIGVNENGYGLVLRNSVCDSDEDKQEGATRHSNNGNQFPILDILVT

Query:  ALRKSLV-TCSV---EPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA
         LRKSLV +C++   E D V+SMDI  P  V+HVSHVTFDRFNGFLGLP+E EPEVP R PSA
Subjt:  ALRKSLV-TCSV---EPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA

Q9CAX8 Rho GTPase-activating protein 43.7e-1849.43Show/hide
Query:  DSDEDKQEGATRHSNNGNQFPILDILVTALRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA
        + +E+++E + +          L+ILV+A+R+S++   V  +D+ SM+I  P +VRHV+HVTFDRF+GFLGLP EFEPEVP R PSA
Subjt:  DSDEDKQEGATRHSNNGNQFPILDILVTALRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA

Q9FMR1 Rho GTPase-activating protein 11.3e-1853.75Show/hide
Query:  EGATRHSNNGNQFPILDILVTALRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA
        +G        +Q  +L +LV   R+SL++C     ++ SM+I  P NVRHV+HVTFDRFNGFLGLP EFEPEVP R PSA
Subjt:  EGATRHSNNGNQFPILDILVTALRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA

Arabidopsis top hitse value%identityAlignment
AT1G08340.1 Rho GTPase activating protein with PAK-box/P21-Rho-binding domain1.7e-1373.17Show/hide
Query:  MDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA
        MDI  P N+RHV+HVTFDRF+GFLGLP+EFEP+VP + PSA
Subjt:  MDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA

AT2G46710.1 Rho GTPase activating protein with PAK-box/P21-Rho-binding domain2.5e-2241.72Show/hide
Query:  MTRLFRSKSCGHVRVAEFKPPPPPPTSYYD-SDDEEEEEEEEEEEEDDYYGDGVAIGVNENGYGLVLRNSVCDSDEDKQEGATRHSNNGNQFPILDILVT
        MT   RSKS G +   EFKP  P P  Y +  +D++E EE       DYY     +  + +  G                    + +   Q  ++D+L  
Subjt:  MTRLFRSKSCGHVRVAEFKPPPPPPTSYYD-SDDEEEEEEEEEEEEDDYYGDGVAIGVNENGYGLVLRNSVCDSDEDKQEGATRHSNNGNQFPILDILVT

Query:  ALRKSLV-TCSV---EPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA
         LRKSLV +C++   E D V+SMDI  P  V+HVSHVTFDRFNGFLGLP+E EPEVP R PSA
Subjt:  ALRKSLV-TCSV---EPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA

AT3G11490.1 rac GTPase activating protein2.6e-1949.43Show/hide
Query:  DSDEDKQEGATRHSNNGNQFPILDILVTALRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA
        + +E+++E + +          L+ILV+A+R+S++   V  +D+ SM+I  P +VRHV+HVTFDRF+GFLGLP EFEPEVP R PSA
Subjt:  DSDEDKQEGATRHSNNGNQFPILDILVTALRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA

AT4G03100.1 Rho GTPase activating protein with PAK-box/P21-Rho-binding domain4.2e-1744.23Show/hide
Query:  RNSVCDSDEDKQEGATRHSNNGNQFPILDILVTALRKSLVTCSVE--PDD----------VSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTR
        R S  + +E++++       N  Q  +++ L+TALRKS+V+C V+   DD          V  M+I  P NVRH++HVTFDRF+GFLGLP E + E+P R
Subjt:  RNSVCDSDEDKQEGATRHSNNGNQFPILDILVTALRKSLVTCSVE--PDD----------VSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTR

Query:  VPSA
        VPSA
Subjt:  VPSA

AT5G22400.1 Rho GTPase activating protein with PAK-box/P21-Rho-binding domain9.1e-2053.75Show/hide
Query:  EGATRHSNNGNQFPILDILVTALRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA
        +G        +Q  +L +LV   R+SL++C     ++ SM+I  P NVRHV+HVTFDRFNGFLGLP EFEPEVP R PSA
Subjt:  EGATRHSNNGNQFPILDILVTALRKSLVTCSVEPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCGCTTATTTCGATCCAAATCGTGCGGACACGTCAGAGTTGCGGAATTCAAGCCACCGCCGCCACCGCCGACCTCTTATTACGACAGTGATGATGAGGAGGAAGA
GGAAGAAGAGGAAGAGGAAGAAGAGGACGATTATTATGGAGATGGGGTTGCGATTGGGGTAAATGAAAATGGGTATGGCTTGGTTTTGAGAAATTCAGTCTGCGATAGTG
ATGAGGACAAGCAAGAGGGAGCTACGAGGCATAGTAATAACGGGAATCAGTTTCCGATACTTGACATTTTGGTAACGGCATTGAGGAAATCGTTGGTTACTTGCAGTGTG
GAACCGGATGATGTTTCTTCCATGGATATTAGCTCGCCTGTGAATGTGAGGCATGTTTCTCATGTTACGTTTGATAGGTTCAATGGGTTTCTGGGTTTGCCTACAGAGTT
CGAGCCTGAGGTGCCAACCAGAGTGCCAAGCGCCAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTCGCTTATTTCGATCCAAATCGTGCGGACACGTCAGAGTTGCGGAATTCAAGCCACCGCCGCCACCGCCGACCTCTTATTACGACAGTGATGATGAGGAGGAAGA
GGAAGAAGAGGAAGAGGAAGAAGAGGACGATTATTATGGAGATGGGGTTGCGATTGGGGTAAATGAAAATGGGTATGGCTTGGTTTTGAGAAATTCAGTCTGCGATAGTG
ATGAGGACAAGCAAGAGGGAGCTACGAGGCATAGTAATAACGGGAATCAGTTTCCGATACTTGACATTTTGGTAACGGCATTGAGGAAATCGTTGGTTACTTGCAGTGTG
GAACCGGATGATGTTTCTTCCATGGATATTAGCTCGCCTGTGAATGTGAGGCATGTTTCTCATGTTACGTTTGATAGGTTCAATGGGTTTCTGGGTTTGCCTACAGAGTT
CGAGCCTGAGGTGCCAACCAGAGTGCCAAGCGCCAGGTGA
Protein sequenceShow/hide protein sequence
MTRLFRSKSCGHVRVAEFKPPPPPPTSYYDSDDEEEEEEEEEEEEDDYYGDGVAIGVNENGYGLVLRNSVCDSDEDKQEGATRHSNNGNQFPILDILVTALRKSLVTCSV
EPDDVSSMDISSPVNVRHVSHVTFDRFNGFLGLPTEFEPEVPTRVPSAR