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Lsi05G021710 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G021710
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:28387626..28388000
RNA-Seq ExpressionLsi05G021710
SyntenyLsi05G021710
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR032238 - Putative ATP-synthase-associated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048855.1 putative permease/transmembrane protein [Cucumis melo var. makuwa]1.1e-1145.1Show/hide
Query:  EAGFAMESAMKEEERDEKRNGNMKSYKTATCVVSMVVACLMGGLVFGWWVFQFHPTNRQLWMVPFSLILMIAPIFVLMSLLINAFCTSMDHNTTSAAPSS
        + G  +E  MK  E ++K+  N K      CVV +V+  + G  + GWW  +FH + +Q WMVPFSL+LMIAPIFVL+S+ I++FC SMD   +S   S 
Subjt:  EAGFAMESAMKEEERDEKRNGNMKSYKTATCVVSMVVACLMGGLVFGWWVFQFHPTNRQLWMVPFSLILMIAPIFVLMSLLINAFCTSMDHNTTSAAPSS

Query:  DH
        DH
Subjt:  DH

KAB1219726.1 hypothetical protein CJ030_MR3G019179 [Morella rubra]3.6e-1042.86Show/hide
Query:  EEERDEKRNGNMKSYKTATCVVSMVVACLMGGLVFGWWVFQFHPTNRQLWMVPFSLILMIAPIFVLMSLLINAFCTS
        +EE+DE +    +  K        ++ C++GGL  G+W F++HPTNRQLWMVPF LIL++ P+FV  S++++  C+S
Subjt:  EEERDEKRNGNMKSYKTATCVVSMVVACLMGGLVFGWWVFQFHPTNRQLWMVPFSLILMIAPIFVLMSLLINAFCTS

KAG6582696.1 hypothetical protein SDJN03_22698, partial [Cucurbita argyrosperma subsp. sororia]1.8e-2559.38Show/hide
Query:  QTWRFAKGGDEEAGFAMESAMKEEERDEKRNGNMKSYKTATCVVSMVVACLMGGLVFGWWVFQFHPTNRQLWMVPFSLILMIAPIFVLMSLLINAF----
        +TW FA GG EEAG  MESAMKE         NMKS K AT VVSM V  ++GG+VFGWW F+FHPTNRQLWMVPF LILM  P+FV+MSLLI+AF    
Subjt:  QTWRFAKGGDEEAGFAMESAMKEEERDEKRNGNMKSYKTATCVVSMVVACLMGGLVFGWWVFQFHPTNRQLWMVPFSLILMIAPIFVLMSLLINAF----

Query:  --CTSMDHNTTSAAPSSDHGIQQSVQIG
           TSMD N  + A      I++SVQIG
Subjt:  --CTSMDHNTTSAAPSSDHGIQQSVQIG

KGN56384.1 hypothetical protein Csa_011278 [Cucumis sativus]6.6e-5286.89Show/hide
Query:  MDQTWRFAKGGDEEAGFAMESAMKEEERDEKRNGNMKSYKTATCVVSMVVACLMGGLVFGWWVFQFHPTNRQLWMVPFSLILMIAPIFVLMSLLINAFCT
        MDQTWRFA+GGDEEAGF MESAMKEE+RD+KRNGNMKS K AT V+SMVVACL GGLVFGWWVFQFHPTNRQLWMVPFSL+LMIAPIFV+MSLLI+AFC 
Subjt:  MDQTWRFAKGGDEEAGFAMESAMKEEERDEKRNGNMKSYKTATCVVSMVVACLMGGLVFGWWVFQFHPTNRQLWMVPFSLILMIAPIFVLMSLLINAFCT

Query:  SMDHNTTSAAPSSDHGIQQSVQ
        SMD  TTSAAPSSDH IQQSVQ
Subjt:  SMDHNTTSAAPSSDHGIQQSVQ

KGN56386.1 hypothetical protein Csa_010779 [Cucumis sativus]6.6e-1245.1Show/hide
Query:  EAGFAMESAMKEEERDEKRNGNMKSYKTATCVVSMVVACLMGGLVFGWWVFQFHPTNRQLWMVPFSLILMIAPIFVLMSLLINAFCTSMDHNTTSAAPSS
        + G  +E  MK  E ++K+  N K      CVV +V+  + G  + GWW  +FH + +Q WMVPFSL+LMIAPIFVL+S+ I++FC SMD   +S   S 
Subjt:  EAGFAMESAMKEEERDEKRNGNMKSYKTATCVVSMVVACLMGGLVFGWWVFQFHPTNRQLWMVPFSLILMIAPIFVLMSLLINAFCTSMDHNTTSAAPSS

Query:  DH
        DH
Subjt:  DH

TrEMBL top hitse value%identityAlignment
A0A0A0L5S1 Uncharacterized protein3.2e-5286.89Show/hide
Query:  MDQTWRFAKGGDEEAGFAMESAMKEEERDEKRNGNMKSYKTATCVVSMVVACLMGGLVFGWWVFQFHPTNRQLWMVPFSLILMIAPIFVLMSLLINAFCT
        MDQTWRFA+GGDEEAGF MESAMKEE+RD+KRNGNMKS K AT V+SMVVACL GGLVFGWWVFQFHPTNRQLWMVPFSL+LMIAPIFV+MSLLI+AFC 
Subjt:  MDQTWRFAKGGDEEAGFAMESAMKEEERDEKRNGNMKSYKTATCVVSMVVACLMGGLVFGWWVFQFHPTNRQLWMVPFSLILMIAPIFVLMSLLINAFCT

Query:  SMDHNTTSAAPSSDHGIQQSVQ
        SMD  TTSAAPSSDH IQQSVQ
Subjt:  SMDHNTTSAAPSSDHGIQQSVQ

A0A0A0L8F5 Uncharacterized protein3.2e-1245.1Show/hide
Query:  EAGFAMESAMKEEERDEKRNGNMKSYKTATCVVSMVVACLMGGLVFGWWVFQFHPTNRQLWMVPFSLILMIAPIFVLMSLLINAFCTSMDHNTTSAAPSS
        + G  +E  MK  E ++K+  N K      CVV +V+  + G  + GWW  +FH + +Q WMVPFSL+LMIAPIFVL+S+ I++FC SMD   +S   S 
Subjt:  EAGFAMESAMKEEERDEKRNGNMKSYKTATCVVSMVVACLMGGLVFGWWVFQFHPTNRQLWMVPFSLILMIAPIFVLMSLLINAFCTSMDHNTTSAAPSS

Query:  DH
        DH
Subjt:  DH

A0A2N9FJR8 Uncharacterized protein3.0e-1042.05Show/hide
Query:  EEERDEKRNGNMKSYKTATCVVSMVVACLMGGLVFGWWVFQFHPTNRQLWMVPFSLILMIAPIFVLMSLLINAFCTS-MDHNTTSAAP
        +E RDE      +  KT        +  ++GGL F WW F++HPTN QLWMVPFSLIL++ P+FV  S+ ++  C+S MD    ++ P
Subjt:  EEERDEKRNGNMKSYKTATCVVSMVVACLMGGLVFGWWVFQFHPTNRQLWMVPFSLILMIAPIFVLMSLLINAFCTS-MDHNTTSAAP

A0A5D3DB24 Putative permease/transmembrane protein5.5e-1245.1Show/hide
Query:  EAGFAMESAMKEEERDEKRNGNMKSYKTATCVVSMVVACLMGGLVFGWWVFQFHPTNRQLWMVPFSLILMIAPIFVLMSLLINAFCTSMDHNTTSAAPSS
        + G  +E  MK  E ++K+  N K      CVV +V+  + G  + GWW  +FH + +Q WMVPFSL+LMIAPIFVL+S+ I++FC SMD   +S   S 
Subjt:  EAGFAMESAMKEEERDEKRNGNMKSYKTATCVVSMVVACLMGGLVFGWWVFQFHPTNRQLWMVPFSLILMIAPIFVLMSLLINAFCTSMDHNTTSAAPSS

Query:  DH
        DH
Subjt:  DH

A0A6A1W5X8 Uncharacterized protein1.8e-1042.86Show/hide
Query:  EEERDEKRNGNMKSYKTATCVVSMVVACLMGGLVFGWWVFQFHPTNRQLWMVPFSLILMIAPIFVLMSLLINAFCTS
        +EE+DE +    +  K        ++ C++GGL  G+W F++HPTNRQLWMVPF LIL++ P+FV  S++++  C+S
Subjt:  EEERDEKRNGNMKSYKTATCVVSMVVACLMGGLVFGWWVFQFHPTNRQLWMVPFSLILMIAPIFVLMSLLINAFCTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCAAACATGGAGATTTGCAAAGGGTGGAGATGAAGAAGCTGGATTTGCGATGGAGTCAGCAATGAAAGAAGAAGAGAGAGATGAGAAGAGGAATGGGAATATGAA
GAGTTATAAGACAGCAACTTGCGTGGTTTCAATGGTAGTGGCATGCCTGATGGGAGGGCTTGTTTTTGGTTGGTGGGTGTTTCAGTTTCATCCAACAAATAGACAACTAT
GGATGGTACCTTTTAGTCTTATTTTGATGATTGCACCCATATTTGTTTTGATGTCTCTTCTCATCAATGCTTTCTGCACTTCCATGGATCACAATACTACTTCTGCAGCT
CCATCCTCAGACCATGGCATCCAACAATCTGTTCAAATTGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCAAACATGGAGATTTGCAAAGGGTGGAGATGAAGAAGCTGGATTTGCGATGGAGTCAGCAATGAAAGAAGAAGAGAGAGATGAGAAGAGGAATGGGAATATGAA
GAGTTATAAGACAGCAACTTGCGTGGTTTCAATGGTAGTGGCATGCCTGATGGGAGGGCTTGTTTTTGGTTGGTGGGTGTTTCAGTTTCATCCAACAAATAGACAACTAT
GGATGGTACCTTTTAGTCTTATTTTGATGATTGCACCCATATTTGTTTTGATGTCTCTTCTCATCAATGCTTTCTGCACTTCCATGGATCACAATACTACTTCTGCAGCT
CCATCCTCAGACCATGGCATCCAACAATCTGTTCAAATTGGATGA
Protein sequenceShow/hide protein sequence
MDQTWRFAKGGDEEAGFAMESAMKEEERDEKRNGNMKSYKTATCVVSMVVACLMGGLVFGWWVFQFHPTNRQLWMVPFSLILMIAPIFVLMSLLINAFCTSMDHNTTSAA
PSSDHGIQQSVQIG