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Lsi05G021790 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G021790
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionARABIDILLO-1
Genome locationchr05:28441897..28442797
RNA-Seq ExpressionLsi05G021790
SyntenyLsi05G021790
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR011989 - Armadillo-like helical
IPR044583 - Protein ARABIDILLO 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063670.1 cingulin [Cucumis melo var. makuwa]5.0e-1373.02Show/hide
Query:  MQPFLEHLDAIKISFTNKEKMVEEMKQRLETKPAEEWKKKSFFTIVTAAPTILVAVSAAYAAR
        MQPF+EHLDAIK SFTNKEK VEEM + LET+  E+ KKKSFFTIVTAA TIL AVSA Y ++
Subjt:  MQPFLEHLDAIKISFTNKEKMVEEMKQRLETKPAEEWKKKSFFTIVTAAPTILVAVSAAYAAR
KAG6597042.1 Protein ARABIDILLO 1, partial [Cucurbita argyrosperma subsp. sororia]6.5e-13100Show/hide
Query:  AARALANLAAHGDSNTNNSAVGQEAGALEALVQLTHSPHEGVR
        AARALANLAAHGDSNTNNSAVGQEAGALEALVQLTHSPHEGVR
Subjt:  AARALANLAAHGDSNTNNSAVGQEAGALEALVQLTHSPHEGVR
XP_008455286.1 PREDICTED: cingulin [Cucumis melo]5.0e-1373.02Show/hide
Query:  MQPFLEHLDAIKISFTNKEKMVEEMKQRLETKPAEEWKKKSFFTIVTAAPTILVAVSAAYAAR
        MQPF+EHLDAIK SFTNKEK VEEM + LET+  E+ KKKSFFTIVTAA TIL AVSA Y ++
Subjt:  MQPFLEHLDAIKISFTNKEKMVEEMKQRLETKPAEEWKKKSFFTIVTAAPTILVAVSAAYAAR
XP_038886791.1 protein ARABIDILLO 1 [Benincasa hispida]6.5e-13100Show/hide
Query:  AARALANLAAHGDSNTNNSAVGQEAGALEALVQLTHSPHEGVR
        AARALANLAAHGDSNTNNSAVGQEAGALEALVQLTHSPHEGVR
Subjt:  AARALANLAAHGDSNTNNSAVGQEAGALEALVQLTHSPHEGVR
XP_038889361.1 paramyosin-like [Benincasa hispida]1.2e-1476.19Show/hide
Query:  MQPFLEHLDAIKISFTNKEKMVEEMKQRLETKPAEEWKKKSFFTIVTAAPTILVAVSAAYAAR
        +QPF+EHLDAIK SFTNKEKMVEEMK++LE + AEE KKKSFFTIVTAA TIL AVSA Y ++
Subjt:  MQPFLEHLDAIKISFTNKEKMVEEMKQRLETKPAEEWKKKSFFTIVTAAPTILVAVSAAYAAR
TrEMBL top hitse value%identityAlignment
A0A1S3C0Q0 cingulin2.4e-1373.02Show/hide
Query:  MQPFLEHLDAIKISFTNKEKMVEEMKQRLETKPAEEWKKKSFFTIVTAAPTILVAVSAAYAAR
        MQPF+EHLDAIK SFTNKEK VEEM + LET+  E+ KKKSFFTIVTAA TIL AVSA Y ++
Subjt:  MQPFLEHLDAIKISFTNKEKMVEEMKQRLETKPAEEWKKKSFFTIVTAAPTILVAVSAAYAAR
A0A5D3D489 Cingulin2.4e-1373.02Show/hide
Query:  MQPFLEHLDAIKISFTNKEKMVEEMKQRLETKPAEEWKKKSFFTIVTAAPTILVAVSAAYAAR
        MQPF+EHLDAIK SFTNKEK VEEM + LET+  E+ KKKSFFTIVTAA TIL AVSA Y ++
Subjt:  MQPFLEHLDAIKISFTNKEKMVEEMKQRLETKPAEEWKKKSFFTIVTAAPTILVAVSAAYAAR
A0A6J1IBD5 protein ARABIDILLO 1-like3.2e-13100Show/hide
Query:  AARALANLAAHGDSNTNNSAVGQEAGALEALVQLTHSPHEGVR
        AARALANLAAHGDSNTNNSAVGQEAGALEALVQLTHSPHEGVR
Subjt:  AARALANLAAHGDSNTNNSAVGQEAGALEALVQLTHSPHEGVR
A0A6J1IGC6 protein ARABIDILLO 1-like3.2e-13100Show/hide
Query:  AARALANLAAHGDSNTNNSAVGQEAGALEALVQLTHSPHEGVR
        AARALANLAAHGDSNTNNSAVGQEAGALEALVQLTHSPHEGVR
Subjt:  AARALANLAAHGDSNTNNSAVGQEAGALEALVQLTHSPHEGVR
A0A6J1IWH4 protein ARABIDILLO 13.2e-13100Show/hide
Query:  AARALANLAAHGDSNTNNSAVGQEAGALEALVQLTHSPHEGVR
        AARALANLAAHGDSNTNNSAVGQEAGALEALVQLTHSPHEGVR
Subjt:  AARALANLAAHGDSNTNNSAVGQEAGALEALVQLTHSPHEGVR
SwissProt top hitse value%identityAlignment
O22161 Protein ARABIDILLO 18.0e-1493.02Show/hide
Query:  AARALANLAAHGDSNTNNSAVGQEAGALEALVQLTHSPHEGVR
        AARALANLAAHGDSN NN+AVGQEAGALEALVQLT SPHEGVR
Subjt:  AARALANLAAHGDSNTNNSAVGQEAGALEALVQLTHSPHEGVR
Q9M224 Protein ARABIDILLO 22.3e-1390.7Show/hide
Query:  AARALANLAAHGDSNTNNSAVGQEAGALEALVQLTHSPHEGVR
        AARALANLAAHGDSN NN+AVGQEAGALEALVQLT SPHEGV+
Subjt:  AARALANLAAHGDSNTNNSAVGQEAGALEALVQLTHSPHEGVR
Arabidopsis top hitse value%identityAlignment
AT2G44900.1 ARABIDILLO-15.7e-1593.02Show/hide
Query:  AARALANLAAHGDSNTNNSAVGQEAGALEALVQLTHSPHEGVR
        AARALANLAAHGDSN NN+AVGQEAGALEALVQLT SPHEGVR
Subjt:  AARALANLAAHGDSNTNNSAVGQEAGALEALVQLTHSPHEGVR
AT3G05130.1 BEST Arabidopsis thaliana protein match is: Prefoldin chaperone subunit family protein (TAIR:AT5G27330.1)8.2e-0640.91Show/hide
Query:  QPFLEHLDAIKISFTNKEKMVEEMKQRLE---TKPAEEWKKKSFFTIVTAAPTILVAVSAAYAARA
        +P+   L++I+ +F NKE ++EEMK+  E       E  KK++F+T+V++  T+  A S AYAARA
Subjt:  QPFLEHLDAIKISFTNKEKMVEEMKQRLE---TKPAEEWKKKSFFTIVTAAPTILVAVSAAYAARA
AT3G60350.1 ARABIDILLO-21.7e-1490.7Show/hide
Query:  AARALANLAAHGDSNTNNSAVGQEAGALEALVQLTHSPHEGVR
        AARALANLAAHGDSN NN+AVGQEAGALEALVQLT SPHEGV+
Subjt:  AARALANLAAHGDSNTNNSAVGQEAGALEALVQLTHSPHEGVR
AT5G27330.1 Prefoldin chaperone subunit family protein2.8e-0644.62Show/hide
Query:  MQPFLEHLDAIKISFTNKEKMVEEMKQ---RLETKPAEEWKKKSFFTIVTAAPTILVAVSAAYAA
        M  +   L+AIK +F NKE MVEEMK+   +++    +  KKKSF+T+V++  ++L+A S AYAA
Subjt:  MQPFLEHLDAIKISFTNKEKMVEEMKQ---RLETKPAEEWKKKSFFTIVTAAPTILVAVSAAYAA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCCCTTTCTTGAACATCTGGATGCAATAAAAATATCCTTCACAAACAAGGAGAAAATGGTGGAAGAAATGAAGCAACGACTCGAGACCAAACCAGCGGAGGAATG
GAAGAAGAAGAGCTTCTTCACCATTGTGACTGCAGCACCAACAATTTTGGTGGCTGTTTCTGCTGCTTATGCCGCTCGGGCATTGGCTAATTTAGCTGCCCATGGGGATA
GCAACACAAACAACTCTGCTGTTGGACAAGAGGCAGGTGCACTTGAAGCACTTGTTCAACTTACACATTCTCCTCATGAAGGTGTCAGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGCCCTTTCTTGAACATCTGGATGCAATAAAAATATCCTTCACAAACAAGGAGAAAATGGTGGAAGAAATGAAGCAACGACTCGAGACCAAACCAGCGGAGGAATG
GAAGAAGAAGAGCTTCTTCACCATTGTGACTGCAGCACCAACAATTTTGGTGGCTGTTTCTGCTGCTTATGCCGCTCGGGCATTGGCTAATTTAGCTGCCCATGGGGATA
GCAACACAAACAACTCTGCTGTTGGACAAGAGGCAGGTGCACTTGAAGCACTTGTTCAACTTACACATTCTCCTCATGAAGGTGTCAGGTAG
Protein sequenceShow/hide protein sequence
MQPFLEHLDAIKISFTNKEKMVEEMKQRLETKPAEEWKKKSFFTIVTAAPTILVAVSAAYAARALANLAAHGDSNTNNSAVGQEAGALEALVQLTHSPHEGVR