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Lsi05G021880 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G021880
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:28504375..28504859
RNA-Seq ExpressionLsi05G021880
SyntenyLsi05G021880
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048838.1 hypothetical protein E6C27_scaffold171G00510 [Cucumis melo var. makuwa]2.8e-6190.77Show/hide
Query:  MGTDEGFNNGADLNPNAKEWNPIYDCAPEEERCLFLTFSNGFPLTEHQIVTFFTRKYGACIERVYVHYPDGGKQPPLFGKVVFVASSIPAIILGGKEEAK
        MGT E F NGADLNPNAKEWNPIYDCAPEE+RCLFLTFSNGFPLTEHQIVTFFTRK+GACIERVYVHYP+GGKQ PLFGKVVFVASSIPAI+LGGKEEAK
Subjt:  MGTDEGFNNGADLNPNAKEWNPIYDCAPEEERCLFLTFSNGFPLTEHQIVTFFTRKYGACIERVYVHYPDGGKQPPLFGKVVFVASSIPAIILGGKEEAK

Query:  FFIDSKTMWCKKFEARKARTRPSAPLSRRR
        F IDSKTMWCKKFEARKAR+R SAP SRRR
Subjt:  FFIDSKTMWCKKFEARKARTRPSAPLSRRR

KAE8650218.1 hypothetical protein Csa_011746 [Cucumis sativus]9.0e-6088.46Show/hide
Query:  MGTDEGFNNGADLNPNAKEWNPIYDCAPEEERCLFLTFSNGFPLTEHQIVTFFTRKYGACIERVYVHYPDGGKQPPLFGKVVFVASSIPAIILGGKEEAK
        MGT E F NGADLNPNAKEWNPIYDCAPEE+RCLFLTFSNGFPLTE+QIVTFFTRK+GACIERVYVHYP+GGKQ PLFGKVVFVASSIPAI+LGGKEEAK
Subjt:  MGTDEGFNNGADLNPNAKEWNPIYDCAPEEERCLFLTFSNGFPLTEHQIVTFFTRKYGACIERVYVHYPDGGKQPPLFGKVVFVASSIPAIILGGKEEAK

Query:  FFIDSKTMWCKKFEARKARTRPSAPLSRRR
        F ID+KTMWCKKFE+RKAR+R SAP SRRR
Subjt:  FFIDSKTMWCKKFEARKARTRPSAPLSRRR

XP_022944781.1 uncharacterized protein LOC111449194 [Cucurbita moschata]8.4e-5077.69Show/hide
Query:  MGTDEGFNNGADLNPNAKEWNPIYDCAPEEERCLFLTFSNGFPLTEHQIVTFFTRKYGACIERVYVHYPDGGKQPPLFGKVVFVASSIPAIILGGKEEAK
        M + +GFN    LNP AKEWNP++DCAPEE+RCLFLTFSNG PL+EHQIV FFTR YG+CIERVYVHYPDGG Q PLFGKVVFVASSIPAIILGGK+EAK
Subjt:  MGTDEGFNNGADLNPNAKEWNPIYDCAPEEERCLFLTFSNGFPLTEHQIVTFFTRKYGACIERVYVHYPDGGKQPPLFGKVVFVASSIPAIILGGKEEAK

Query:  FFIDSKTMWCKKFEARKARTR
        F I+SKT+WCK++EARK R R
Subjt:  FFIDSKTMWCKKFEARKARTR

XP_023528303.1 uncharacterized protein LOC111791264 [Cucurbita pepo subsp. pepo]1.1e-4982.46Show/hide
Query:  NNGADLNPNAKEWNPIYDCAPEEERCLFLTFSNGFPLTEHQIVTFFTRKYGACIERVYVHYPDGGKQPPLFGKVVFVASSIPAIILGGKEEAKFFIDSKT
        N G DLNPNAKEW+PI+D APEE+RCLFLTFSNG+PLTEHQIV FFTRK+GACIERVYVHY +GGK+PPLFGKVVFVASSIPAIIL GK+EAKF I+S+T
Subjt:  NNGADLNPNAKEWNPIYDCAPEEERCLFLTFSNGFPLTEHQIVTFFTRKYGACIERVYVHYPDGGKQPPLFGKVVFVASSIPAIILGGKEEAKFFIDSKT

Query:  MWCKKFEARKARTR
        MWCK++EARKAR R
Subjt:  MWCKKFEARKARTR

XP_023540960.1 uncharacterized protein LOC111801189 [Cucurbita pepo subsp. pepo]2.2e-5078.51Show/hide
Query:  MGTDEGFNNGADLNPNAKEWNPIYDCAPEEERCLFLTFSNGFPLTEHQIVTFFTRKYGACIERVYVHYPDGGKQPPLFGKVVFVASSIPAIILGGKEEAK
        M + +GFN    LNP AKEWNP++DCAPEE+RCLFLTFSNG PL+EHQIV FFTRKYG+CIERVYVHYPDGG Q PLFGKVVFVASSIPAIILGGK+EAK
Subjt:  MGTDEGFNNGADLNPNAKEWNPIYDCAPEEERCLFLTFSNGFPLTEHQIVTFFTRKYGACIERVYVHYPDGGKQPPLFGKVVFVASSIPAIILGGKEEAK

Query:  FFIDSKTMWCKKFEARKARTR
        F I+SKT+WCK++EARK R R
Subjt:  FFIDSKTMWCKKFEARKARTR

TrEMBL top hitse value%identityAlignment
A0A0A0L3N4 Uncharacterized protein5.1e-5383.08Show/hide
Query:  MGTDEGFNNGADLNPNAKEWNPIYDCAPEEERCLFLTFSNGFPLTEHQIVTFFTRKYGACIERVYVHYPDGGKQPPLFGKVVFVASSIPAIILGGKEEAK
        MGT E F NGADLNPNAKEWNPIYDCAPEE+RCLFLTFSNGFPLTE+QIVTFFT        RVYVHYP+GGKQ PLFGKVVFVASSIPAI+LGGKEEAK
Subjt:  MGTDEGFNNGADLNPNAKEWNPIYDCAPEEERCLFLTFSNGFPLTEHQIVTFFTRKYGACIERVYVHYPDGGKQPPLFGKVVFVASSIPAIILGGKEEAK

Query:  FFIDSKTMWCKKFEARKARTRPSAPLSRRR
        F ID+KTMWCKKFE+RKAR+R SAP SRRR
Subjt:  FFIDSKTMWCKKFEARKARTRPSAPLSRRR

A0A5A7U0U8 Uncharacterized protein1.4e-6190.77Show/hide
Query:  MGTDEGFNNGADLNPNAKEWNPIYDCAPEEERCLFLTFSNGFPLTEHQIVTFFTRKYGACIERVYVHYPDGGKQPPLFGKVVFVASSIPAIILGGKEEAK
        MGT E F NGADLNPNAKEWNPIYDCAPEE+RCLFLTFSNGFPLTEHQIVTFFTRK+GACIERVYVHYP+GGKQ PLFGKVVFVASSIPAI+LGGKEEAK
Subjt:  MGTDEGFNNGADLNPNAKEWNPIYDCAPEEERCLFLTFSNGFPLTEHQIVTFFTRKYGACIERVYVHYPDGGKQPPLFGKVVFVASSIPAIILGGKEEAK

Query:  FFIDSKTMWCKKFEARKARTRPSAPLSRRR
        F IDSKTMWCKKFEARKAR+R SAP SRRR
Subjt:  FFIDSKTMWCKKFEARKARTRPSAPLSRRR

A0A6J1E9T6 uncharacterized protein LOC1114320885.3e-5082.46Show/hide
Query:  NNGADLNPNAKEWNPIYDCAPEEERCLFLTFSNGFPLTEHQIVTFFTRKYGACIERVYVHYPDGGKQPPLFGKVVFVASSIPAIILGGKEEAKFFIDSKT
        N G DLNPNAKEW+PI+D APEE+RCLFLTFSNG+PLTEHQIV FFTRK+GACIERVYVHY +GGK+PPLFGKVVFVASSIPAIIL GK+EAKF I+S+T
Subjt:  NNGADLNPNAKEWNPIYDCAPEEERCLFLTFSNGFPLTEHQIVTFFTRKYGACIERVYVHYPDGGKQPPLFGKVVFVASSIPAIILGGKEEAKFFIDSKT

Query:  MWCKKFEARKARTR
        MWCK++EARKAR R
Subjt:  MWCKKFEARKARTR

A0A6J1FZ16 uncharacterized protein LOC1114491944.1e-5077.69Show/hide
Query:  MGTDEGFNNGADLNPNAKEWNPIYDCAPEEERCLFLTFSNGFPLTEHQIVTFFTRKYGACIERVYVHYPDGGKQPPLFGKVVFVASSIPAIILGGKEEAK
        M + +GFN    LNP AKEWNP++DCAPEE+RCLFLTFSNG PL+EHQIV FFTR YG+CIERVYVHYPDGG Q PLFGKVVFVASSIPAIILGGK+EAK
Subjt:  MGTDEGFNNGADLNPNAKEWNPIYDCAPEEERCLFLTFSNGFPLTEHQIVTFFTRKYGACIERVYVHYPDGGKQPPLFGKVVFVASSIPAIILGGKEEAK

Query:  FFIDSKTMWCKKFEARKARTR
        F I+SKT+WCK++EARK R R
Subjt:  FFIDSKTMWCKKFEARKARTR

A0A6J1IWW8 uncharacterized protein LOC1114792141.5e-4981.58Show/hide
Query:  NNGADLNPNAKEWNPIYDCAPEEERCLFLTFSNGFPLTEHQIVTFFTRKYGACIERVYVHYPDGGKQPPLFGKVVFVASSIPAIILGGKEEAKFFIDSKT
        N G DLNPNAKEW+PI+D APEE+RCLFLTFSNG+PLTEHQIV FFTR++GACIERVYVHY +GGK+PPLFGKVVFVASSIPAIIL GK+EAKF I+S+T
Subjt:  NNGADLNPNAKEWNPIYDCAPEEERCLFLTFSNGFPLTEHQIVTFFTRKYGACIERVYVHYPDGGKQPPLFGKVVFVASSIPAIILGGKEEAKFFIDSKT

Query:  MWCKKFEARKARTR
        MWCK++EARKAR R
Subjt:  MWCKKFEARKARTR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49290.1 unknown protein1.8e-1036.05Show/hide
Query:  EERCLFLTFSNGFPLTEHQIVTFFTRKYGACIERVYVHYPDGGKQPPLFGKVV--FVASSIPAIILGGKEEAKFFIDSKTMWCKKF
        ++R +FLTFS G+P++E ++  +FTR++G  IE V +   +  +Q PLF K+V     +S+   I+  +   KF ID K +W +K+
Subjt:  EERCLFLTFSNGFPLTEHQIVTFFTRKYGACIERVYVHYPDGGKQPPLFGKVV--FVASSIPAIILGGKEEAKFFIDSKTMWCKKF

AT1G64870.1 unknown protein1.5e-1236.94Show/hide
Query:  WNPIYDCAPEEERCLFLTFSNGFPLTEHQIVTFFTRKYGA-CIERVYVHYPDGG------------KQPPLFGKVVFVASSIPAIILGGKEEAKFFIDSK
        WN  +  A ++ER +FLTFS GFP++  +++  FT  YG  C+E VY+   DGG            +Q PLF K+V  +      IL G+E+ K+ I+ K
Subjt:  WNPIYDCAPEEERCLFLTFSNGFPLTEHQIVTFFTRKYGA-CIERVYVHYPDGG------------KQPPLFGKVVFVASSIPAIILGGKEEAKFFIDSK

Query:  TMWCKKFEARK
         +W +KF+  K
Subjt:  TMWCKKFEARK

AT3G45200.1 unknown protein1.4e-1030.33Show/hide
Query:  NNGADLNPNAKEWNPIYDC-APEEERCLFLTFSNGFPLTEHQIVTFFTRKYGA-CIERVYVHYPD----------GGKQPPLFGKVVFVASSIPAIILGG
        NN     PN   W    +C A E +R LFLTFS G+P+T  +I+  FT++YG  C+E VY+ + +            +Q  LF ++V  + +    +L  
Subjt:  NNGADLNPNAKEWNPIYDC-APEEERCLFLTFSNGFPLTEHQIVTFFTRKYGA-CIERVYVHYPD----------GGKQPPLFGKVVFVASSIPAIILGG

Query:  KEEAKFFIDSKTMWCKKFEARK
        +++ +  I  K +W +K++ R+
Subjt:  KEEAKFFIDSKTMWCKKFEARK

AT5G11220.1 unknown protein8.2e-1133.67Show/hide
Query:  APEEERCLFLTFSNGFPLTEHQIVTFFTRKYGA-CIERVYV----------HYPDGGKQPPLFGKVVFVASSIPAIILGGKEEAKFFIDSKTMWCKKF
        A + ER +F+TFS GFP+++ ++  FFT+ YG  C+E VY+          +  D G+Q  LF K+V  + +    IL G++  +F  + K +W +K+
Subjt:  APEEERCLFLTFSNGFPLTEHQIVTFFTRKYGA-CIERVYV----------HYPDGGKQPPLFGKVVFVASSIPAIILGGKEEAKFFIDSKTMWCKKF

AT5G13620.1 unknown protein5.1e-1335.35Show/hide
Query:  APEEERCLFLTFSNGFPLTEHQIVTFFTRKYGACIERVYVHYPDGGKQPPLFGKVVFVASSIPAIILGGKEEAKFFIDSKTMWCKKFEARKARTRPSAP
        A E++R +FLTFS G+PL+E ++  +FTR++G  IE + +   +G +Q      V+  A+ IP I+  G E  K+ I+ K +W +K+  R +     AP
Subjt:  APEEERCLFLTFSNGFPLTEHQIVTFFTRKYGACIERVYVHYPDGGKQPPLFGKVVFVASSIPAIILGGKEEAKFFIDSKTMWCKKFEARKARTRPSAP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCACAGATGAGGGCTTTAATAATGGTGCTGATTTGAACCCTAATGCAAAAGAGTGGAACCCTATTTACGATTGCGCTCCGGAGGAAGAACGATGCCTCTTTCTCAC
TTTCTCCAATGGCTTCCCGCTTACCGAGCACCAAATCGTCACCTTCTTCACCCGAAAATATGGAGCGTGCATCGAAAGGGTATATGTGCATTATCCGGACGGAGGGAAAC
AACCGCCATTGTTTGGGAAAGTGGTGTTTGTTGCGTCTTCAATTCCAGCAATCATTCTGGGAGGAAAAGAAGAAGCTAAGTTTTTTATTGATAGCAAGACCATGTGGTGT
AAGAAATTTGAGGCTCGTAAAGCTCGCACTAGGCCTTCCGCCCCACTCTCTCGCCGACGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCACAGATGAGGGCTTTAATAATGGTGCTGATTTGAACCCTAATGCAAAAGAGTGGAACCCTATTTACGATTGCGCTCCGGAGGAAGAACGATGCCTCTTTCTCAC
TTTCTCCAATGGCTTCCCGCTTACCGAGCACCAAATCGTCACCTTCTTCACCCGAAAATATGGAGCGTGCATCGAAAGGGTATATGTGCATTATCCGGACGGAGGGAAAC
AACCGCCATTGTTTGGGAAAGTGGTGTTTGTTGCGTCTTCAATTCCAGCAATCATTCTGGGAGGAAAAGAAGAAGCTAAGTTTTTTATTGATAGCAAGACCATGTGGTGT
AAGAAATTTGAGGCTCGTAAAGCTCGCACTAGGCCTTCCGCCCCACTCTCTCGCCGACGCTGA
Protein sequenceShow/hide protein sequence
MGTDEGFNNGADLNPNAKEWNPIYDCAPEEERCLFLTFSNGFPLTEHQIVTFFTRKYGACIERVYVHYPDGGKQPPLFGKVVFVASSIPAIILGGKEEAKFFIDSKTMWC
KKFEARKARTRPSAPLSRRR