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Lsi05G021990 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G021990
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionsquamosa promoter-binding-like protein 7
Genome locationchr05:28564386..28567278
RNA-Seq ExpressionLsi05G021990
SyntenyLsi05G021990
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR044817 - Squamosa promoter-binding-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582716.1 Squamosa promoter-binding-like protein 7, partial [Cucurbita argyrosperma subsp. sororia]1.5e-6887.9Show/hide
Query:  RENKSMTGGIACIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLILDRDWHSNHTVAADDFGGCVVGFHQQQGLYWE---QQQ
        +ENKSMTG IA IPSPTGRALSLLSSK E+WATSSELSLRSSAALRELIAENRAAILARQLILDRDWH NH  A DDFGG  VGFHQQQGLY E   QQQ
Subjt:  RENKSMTGGIACIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLILDRDWHSNHTVAADDFGGCVVGFHQQQGLYWE---QQQ

Query:  QSWERMNENGGSHVTLDLMQAPSTAFGLLSVRGKSKEEDEECCELWNSFNDHDSHVV
        QSWE MNENGG+HVTLDLMQAPSTAFG+LSVRGKSKEEDEECCELWNSF+DHDSHVV
Subjt:  QSWERMNENGGSHVTLDLMQAPSTAFGLLSVRGKSKEEDEECCELWNSFNDHDSHVV

KAG7020690.1 Squamosa promoter-binding-like protein 7, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-6887.9Show/hide
Query:  RENKSMTGGIACIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLILDRDWHSNHTVAADDFGGCVVGFHQQQGLYWE---QQQ
        +ENKSMTG IA IPSPTGRALSLLSSK E+WATSSELSLRSSAALRELIAENRAAILARQLILDRDWH NH  A DDFGG  VGFHQQQGLY E   QQQ
Subjt:  RENKSMTGGIACIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLILDRDWHSNHTVAADDFGGCVVGFHQQQGLYWE---QQQ

Query:  QSWERMNENGGSHVTLDLMQAPSTAFGLLSVRGKSKEEDEECCELWNSFNDHDSHVV
        QSWE MNENGG+HVTLDLMQAPSTAFG+LSVRGKSKEEDEECCELWNSF+DHDSHVV
Subjt:  QSWERMNENGGSHVTLDLMQAPSTAFGLLSVRGKSKEEDEECCELWNSFNDHDSHVV

XP_022924306.1 squamosa promoter-binding-like protein 7 [Cucurbita moschata]3.6e-7089.61Show/hide
Query:  RENKSMTGGIACIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLILDRDWHSNHTVAADDFGGCVVGFHQQQGLYWEQQQQSW
        +ENKSMTG IA IPSPTGRALSLLSSK E+WATSSELSLRSSAALRELIAENRAAILARQLILDRDWH NH  A DDFGG  VGFHQQQGLY EQQQQSW
Subjt:  RENKSMTGGIACIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLILDRDWHSNHTVAADDFGGCVVGFHQQQGLYWEQQQQSW

Query:  ERMNENGGSHVTLDLMQAPSTAFGLLSVRGKSKEEDEECCELWNSFNDHDSHVV
        E MNENGG+HVTLDLMQAPSTAFG+LSVRGKSKEEDEECCELWNSF+DHDSHVV
Subjt:  ERMNENGGSHVTLDLMQAPSTAFGLLSVRGKSKEEDEECCELWNSFNDHDSHVV

XP_022980839.1 squamosa promoter-binding-like protein 7 [Cucurbita maxima]1.7e-6787.1Show/hide
Query:  RENKSMTGGIACIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLILDRDWHSNHTVAADDFGGCVVGFHQQQGLYWE-QQQQS
        +ENKSMTG IA IPSPTGRALSLLSSK E+WAT+SELSLRSSAALRELIAENRAAILARQLILDRDWH NH    DDFGG  VGFHQQQGLY E QQQQS
Subjt:  RENKSMTGGIACIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLILDRDWHSNHTVAADDFGGCVVGFHQQQGLYWE-QQQQS

Query:  WERMNENGGSHVTLDLMQAPSTAFGLLSVRGKSKEEDEECCELWNSFNDHDSHVV
        WE MNENGG+HVTLDLMQAPSTAFG+LSVRGKSKEE+EECCELWNSF+DHDSHVV
Subjt:  WERMNENGGSHVTLDLMQAPSTAFGLLSVRGKSKEEDEECCELWNSFNDHDSHVV

XP_038874951.1 squamosa promoter-binding-like protein 7 isoform X1 [Benincasa hispida]6.8e-6989.17Show/hide
Query:  RENKSMTGGIACIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLILDRDWHSNH--TVAADDFGGCVVGFHQQQGLY-WEQQQ
        +ENKSMTGGIA  PSPTGRALSLLSSKN+SW  SSELSLRSSAALRELIAENRAAILARQLILDRDWHSNH    AADDFGG  VGFHQQQGLY  +QQQ
Subjt:  RENKSMTGGIACIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLILDRDWHSNH--TVAADDFGGCVVGFHQQQGLY-WEQQQ

Query:  QSWERMNENGGSHVTLDLMQAPSTAFGLLSVRGKSKEEDEECCELWNSFNDHDSHVV
        QSWERM+ENGGSHVTLDLMQAPSTAFGLLS+RGKSKEEDEECCELWNSFNDHDSHVV
Subjt:  QSWERMNENGGSHVTLDLMQAPSTAFGLLSVRGKSKEEDEECCELWNSFNDHDSHVV

TrEMBL top hitse value%identityAlignment
A0A1S3AUU7 squamosa promoter-binding-like protein 7 isoform X22.2e-6588.96Show/hide
Query:  RENKSMTGGIACIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLILDRDWHSNHTVAADDFGGCVVGFHQQQGLYWEQQQQSW
        +ENKSMT GIA +PSPTGRALSLLSSKNESWA SSELS RSSAALRELIAENRAAILARQLILDRDWHSNH  A DDFGG  VGF QQQGLY E QQ SW
Subjt:  RENKSMTGGIACIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLILDRDWHSNHTVAADDFGGCVVGFHQQQGLYWEQQQQSW

Query:  ERMNENGGSHVTLDLMQAPSTAFGLLSVRGKSKEEDEECCELWNSFNDHDSHVV
        ERMNENGGSHVTLDLMQAPS+AFGLLSVRGKSKEEDEECCELWNSFNDHD HVV
Subjt:  ERMNENGGSHVTLDLMQAPSTAFGLLSVRGKSKEEDEECCELWNSFNDHDSHVV

A0A1S3AUZ3 squamosa promoter-binding-like protein 7 isoform X12.9e-6589.54Show/hide
Query:  ENKSMTGGIACIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLILDRDWHSNHTVAADDFGGCVVGFHQQQGLYWEQQQQSWE
        ENKSMT GIA +PSPTGRALSLLSSKNESWA SSELS RSSAALRELIAENRAAILARQLILDRDWHSNH  A DDFGG  VGF QQQGLY E QQ SWE
Subjt:  ENKSMTGGIACIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLILDRDWHSNHTVAADDFGGCVVGFHQQQGLYWEQQQQSWE

Query:  RMNENGGSHVTLDLMQAPSTAFGLLSVRGKSKEEDEECCELWNSFNDHDSHVV
        RMNENGGSHVTLDLMQAPS+AFGLLSVRGKSKEEDEECCELWNSFNDHD HVV
Subjt:  RMNENGGSHVTLDLMQAPSTAFGLLSVRGKSKEEDEECCELWNSFNDHDSHVV

A0A5A7TYZ3 Squamosa promoter-binding-like protein 7 isoform X12.9e-6589.54Show/hide
Query:  ENKSMTGGIACIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLILDRDWHSNHTVAADDFGGCVVGFHQQQGLYWEQQQQSWE
        ENKSMT GIA +PSPTGRALSLLSSKNESWA SSELS RSSAALRELIAENRAAILARQLILDRDWHSNH  A DDFGG  VGF QQQGLY E QQ SWE
Subjt:  ENKSMTGGIACIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLILDRDWHSNHTVAADDFGGCVVGFHQQQGLYWEQQQQSWE

Query:  RMNENGGSHVTLDLMQAPSTAFGLLSVRGKSKEEDEECCELWNSFNDHDSHVV
        RMNENGGSHVTLDLMQAPS+AFGLLSVRGKSKEEDEECCELWNSFNDHD HVV
Subjt:  RMNENGGSHVTLDLMQAPSTAFGLLSVRGKSKEEDEECCELWNSFNDHDSHVV

A0A6J1E967 squamosa promoter-binding-like protein 71.8e-7089.61Show/hide
Query:  RENKSMTGGIACIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLILDRDWHSNHTVAADDFGGCVVGFHQQQGLYWEQQQQSW
        +ENKSMTG IA IPSPTGRALSLLSSK E+WATSSELSLRSSAALRELIAENRAAILARQLILDRDWH NH  A DDFGG  VGFHQQQGLY EQQQQSW
Subjt:  RENKSMTGGIACIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLILDRDWHSNHTVAADDFGGCVVGFHQQQGLYWEQQQQSW

Query:  ERMNENGGSHVTLDLMQAPSTAFGLLSVRGKSKEEDEECCELWNSFNDHDSHVV
        E MNENGG+HVTLDLMQAPSTAFG+LSVRGKSKEEDEECCELWNSF+DHDSHVV
Subjt:  ERMNENGGSHVTLDLMQAPSTAFGLLSVRGKSKEEDEECCELWNSFNDHDSHVV

A0A6J1J0C2 squamosa promoter-binding-like protein 78.1e-6887.1Show/hide
Query:  RENKSMTGGIACIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLILDRDWHSNHTVAADDFGGCVVGFHQQQGLYWE-QQQQS
        +ENKSMTG IA IPSPTGRALSLLSSK E+WAT+SELSLRSSAALRELIAENRAAILARQLILDRDWH NH    DDFGG  VGFHQQQGLY E QQQQS
Subjt:  RENKSMTGGIACIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLILDRDWHSNHTVAADDFGGCVVGFHQQQGLYWE-QQQQS

Query:  WERMNENGGSHVTLDLMQAPSTAFGLLSVRGKSKEEDEECCELWNSFNDHDSHVV
        WE MNENGG+HVTLDLMQAPSTAFG+LSVRGKSKEE+EECCELWNSF+DHDSHVV
Subjt:  WERMNENGGSHVTLDLMQAPSTAFGLLSVRGKSKEEDEECCELWNSFNDHDSHVV

SwissProt top hitse value%identityAlignment
Q01JD1 Squamosa promoter-binding-like protein 75.5e-0537.93Show/hide
Query:  IPSPTGRALSLLSSKNES--W-ATSSELSLRSSAALRELIAENRAAILARQLILDRD-WHSNHTVAADDFGGCVVGFHQQQGLYWEQQQQSWERMNENGG
        +P+ +  ALSLLSS   +  W   + ++S RSSAAL ELIAENRAA+L+ Q   DR    +              G+H    L            +E+  
Subjt:  IPSPTGRALSLLSSKNES--W-ATSSELSLRSSAALRELIAENRAAILARQLILDRD-WHSNHTVAADDFGGCVVGFHQQQGLYWEQQQQSWERMNENGG

Query:  SHVTLDLMQAPSTAFG
         HVTLDLMQA + A G
Subjt:  SHVTLDLMQAPSTAFG

Q7XT42 Squamosa promoter-binding-like protein 71.5e-0538.79Show/hide
Query:  IPSPTGRALSLLSSKNES--W-ATSSELSLRSSAALRELIAENRAAILARQLILDRD-WHSNHTVAADDFGGCVVGFHQQQGLYWEQQQQSWERMNENGG
        +P+ +  ALSLLSS   +  W   + ++S RSSAAL ELIAENRAA+L+ Q   DR    +              G+H    L            +EN  
Subjt:  IPSPTGRALSLLSSKNES--W-ATSSELSLRSSAALRELIAENRAAILARQLILDRD-WHSNHTVAADDFGGCVVGFHQQQGLYWEQQQQSWERMNENGG

Query:  SHVTLDLMQAPSTAFG
         HVTLDLMQA + A G
Subjt:  SHVTLDLMQAPSTAFG

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGAAGAAGGAAGAGCTCTCATGAATCTGTTGCAGCAAGGAACTGCAACCAAGGGTTTTGTAAGTATTGTGTGTAATAAGAAAGTTGAGGTGAAAAGAGAAAACAA
GTCGATGACAGGTGGAATTGCATGCATACCATCCCCGACGGGACGTGCTCTCTCTCTTCTGTCATCGAAGAACGAATCATGGGCCACCTCCTCGGAGCTCTCCCTGAGGT
CGAGCGCAGCGCTCCGGGAACTTATAGCGGAGAATCGCGCCGCCATCCTCGCTCGGCAGTTGATTCTCGACAGAGATTGGCATTCAAACCACACGGTGGCGGCGGATGAT
TTCGGAGGATGCGTCGTTGGATTCCATCAGCAGCAGGGATTGTATTGGGAGCAGCAGCAACAGAGCTGGGAGAGGATGAATGAAAATGGCGGTTCGCACGTGACGCTGGA
TCTGATGCAGGCGCCGAGCACGGCGTTTGGGCTGCTGTCTGTGAGAGGGAAATCGAAAGAAGAAGATGAAGAATGTTGCGAGCTATGGAACTCCTTCAACGATCACGACT
CTCATGTCGTTTAA
mRNA sequenceShow/hide mRNA sequence
TTAGAAAGAAAGCATATAGGATTTAGAGAGGTAGAATTAAGGAAAAATGAAAGGAAGTCACATATTGAGGATATTTGTTAGTTGTTATGTTAATGGTAAGTGGTAAGGCA
TTTGTTGTCGCCAGTTTCCCCCTGTACTGGCCTCTACTCTCTCTGTCTGTGCAATGGTGCAGCAGCTTTTCTTCCACTCACTTTAACCCTTCCCATTGGGGATTTACAAT
TATATCACAGAAGACTCTTCACTGCTTCTCTCTCTCTGACTCTGTTTTTCCCGACATCAACCTCTTCTTTCCCTCTTTTGGTATAAATTCCCCAACCCCATCTCCCTCTT
TCTCCTGTCACCATAACACAACCCAATCCCACCATTATTCACTGCTCTCTTTTCCTTGAACTTCCTTCCTTCCTTCCTCCCTCTTTTCCTGCCAATTCCTAAAATGGAGA
TGGAGATTTGCGGCAACTTGATGGGACACTCCAATCCCACCAGAGACCATAATCCCAACGCCACTAATCTTTCCTGGCCCAATACTAACATTTGGGAGCTCAATTCCGAA
CCCATCTCCTCCTCTGCCCACGCCCTCTGGCTCCAACCCCACGACGCCGGCCACCGCCAGTTTCTCTACGCCGGAGACCATCAGCCCCCCCATTTCCACCCAGACCCCCA
TCTCATGTGCTTGAAGCTCGGCAAGAGGCACTACTTCGAGGACGCCAACGCGCCCTCCGTCGTCGGAGGTTTCGCCGCCGTGGGGAAGAGAGGGAAGGCGTTTTACGGCG
GCGATGGAGGGGGTTACGGGCCAGTTCCGAGCAGTGTACCCCGGTGCCAAGTGGAGGGATGCCACGTGGCGCTGGTGAACGCTAAGGACTACCACCGTAGGCATAGGGTT
TGTGAGATGCACTCAAAGGCTCCCAAAGTCGTGGTGGTTGGCTTAGAGCAGAGGTTCTGCCAGCAGTGTAGCAGGTTTCATGTGATTTCTGAATTTGATGATTCGAAGAG
GAGCTGTAGGAGGAGACTAGCAGGCCACAATGAGAGAAGAAGGAAGAGCTCTCATGAATCTGTTGCAGCAAGGAACTGCAACCAAGGGTTTTGTAAGTATTGTGTGTAAT
AAGAAAGTTGAGGTGAAAAGAGAAAACAAGTCGATGACAGGTGGAATTGCATGCATACCATCCCCGACGGGACGTGCTCTCTCTCTTCTGTCATCGAAGAACGAATCATG
GGCCACCTCCTCGGAGCTCTCCCTGAGGTCGAGCGCAGCGCTCCGGGAACTTATAGCGGAGAATCGCGCCGCCATCCTCGCTCGGCAGTTGATTCTCGACAGAGATTGGC
ATTCAAACCACACGGTGGCGGCGGATGATTTCGGAGGATGCGTCGTTGGATTCCATCAGCAGCAGGGATTGTATTGGGAGCAGCAGCAACAGAGCTGGGAGAGGATGAAT
GAAAATGGCGGTTCGCACGTGACGCTGGATCTGATGCAGGCGCCGAGCACGGCGTTTGGGCTGCTGTCTGTGAGAGGGAAATCGAAAGAAGAAGATGAAGAATGTTGCGA
GCTATGGAACTCCTTCAACGATCACGACTCTCATGTCGTTTAAAATTATATTATAATTTATAATTATAAATGTATATGGTTGTGGAATCATTAACATTTGGAAGCTCTAT
AATTCTTTTTTCATCACTCGCATCATTTCTTTTCTTTTCCCACCTATTTTTCTACACTTTTTTTATTTTTCATTTTTCATTTTTCATTTTTGTTGCTGATGAATTCAACC
ATTG
Protein sequenceShow/hide protein sequence
MREEGRALMNLLQQGTATKGFVSIVCNKKVEVKRENKSMTGGIACIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLILDRDWHSNHTVAADD
FGGCVVGFHQQQGLYWEQQQQSWERMNENGGSHVTLDLMQAPSTAFGLLSVRGKSKEEDEECCELWNSFNDHDSHVV