; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G022150 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G022150
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description60S acidic ribosomal protein P1-like
Genome locationchr05:28732849..28734483
RNA-Seq ExpressionLsi05G022150
SyntenyLsi05G022150
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0006414 - translational elongation (biological process)
GO:0032147 - activation of protein kinase activity (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0030295 - protein kinase activator activity (molecular function)
GO:0043021 - ribonucleoprotein complex binding (molecular function)
InterPro domainsIPR027534 - Ribosomal protein L12/P1/P2 family
IPR038716 - Ribosomal protein P1/P2, N-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597015.1 60S acidic ribosomal protein P1-2, partial [Cucurbita argyrosperma subsp. sororia]9.7e-4288.6Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGAGGGAAVAAAVPAGGAAGGAAAAAAAPPPEEKKEEP
        MS GEIACSYAALILYDDNIP+TAEK+ATLVK A V   +SYWFSLFAKLAEKRNIGDLI+NVGAGGGAAVAAAVPAGGA  G AAAAAAPPPEEKKEEP
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGAGGGAAVAAAVPAGGAAGGAAAAAAAPPPEEKKEEP

Query:  KEESDDDMGFSLFD
        KEESDDDMGFSLFD
Subjt:  KEESDDDMGFSLFD

XP_004133766.1 60S acidic ribosomal protein P1 [Cucumis sativus]1.8e-4390.35Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGAGGGAAVAAAVPAGGAAGGAAAAAAAPPPEEKKEEP
        MSTGEIACSYAALILYDDNIPITAEKIATLVK A V  V+SYW+ LFAKLAEKR+IGDLILNVGAGGGAAVAAA PAGGAAGG  AAAAAPPPEEKKEEP
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGAGGGAAVAAAVPAGGAAGGAAAAAAAPPPEEKKEEP

Query:  KEESDDDMGFSLFD
        KEESDDDMGFSLFD
Subjt:  KEESDDDMGFSLFD

XP_008437779.1 PREDICTED: 60S acidic ribosomal protein P1-like [Cucumis melo]5.5e-4592.98Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGAGGGAAVAAAVPAGGAAGGAAAAAAAPPPEEKKEEP
        MSTGEIACSYAALILYDDNIPITAEKIATLVK ANV  V+SYW+SLFAKLAEKRNIGDLILNVGAGGGAAVAAAVPAGGAA G  AAAAAPPPEEKKEEP
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGAGGGAAVAAAVPAGGAAGGAAAAAAAPPPEEKKEEP

Query:  KEESDDDMGFSLFD
        KEESDDDMGFSLFD
Subjt:  KEESDDDMGFSLFD

XP_022144008.1 60S acidic ribosomal protein P1-like [Momordica charantia]4.6e-4491.23Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGAGGGAAVAAAVPAGGAAGGAAAAAAAPPPEEKKEEP
        MST EIACSYAA+ILYDD I ITAEKIA LVK ANV GVDSYW+SLFAKLAEKRNIGDLI+NVGAGGGAAVAAAVPAGGAAGG AAAAAAPPPEEKKEEP
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGAGGGAAVAAAVPAGGAAGGAAAAAAAPPPEEKKEEP

Query:  KEESDDDMGFSLFD
        KEESDDDMGFSLFD
Subjt:  KEESDDDMGFSLFD

XP_038883955.1 60S acidic ribosomal protein P1-like [Benincasa hispida]1.4e-4592.98Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGAGGGAAVAAAVPAGGAAGGAAAAAAAPPPEEKKEEP
        MSTGEIACSYAALILYDDNIPITAEKIAT+VK ANVP V+SYWF LFAKLAEKRNIGDLILNVGAGGGAAVAAAVPA G AGG AAAAAAPPPEEKKEEP
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGAGGGAAVAAAVPAGGAAGGAAAAAAAPPPEEKKEEP

Query:  KEESDDDMGFSLFD
        KEESDDDMGFSLFD
Subjt:  KEESDDDMGFSLFD

TrEMBL top hitse value%identityAlignment
A0A0A0L5M7 Uncharacterized protein8.5e-4490.35Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGAGGGAAVAAAVPAGGAAGGAAAAAAAPPPEEKKEEP
        MSTGEIACSYAALILYDDNIPITAEKIATLVK A V  V+SYW+ LFAKLAEKR+IGDLILNVGAGGGAAVAAA PAGGAAGG  AAAAAPPPEEKKEEP
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGAGGGAAVAAAVPAGGAAGGAAAAAAAPPPEEKKEEP

Query:  KEESDDDMGFSLFD
        KEESDDDMGFSLFD
Subjt:  KEESDDDMGFSLFD

A0A1S3AUG9 60S acidic ribosomal protein P1-like2.7e-4592.98Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGAGGGAAVAAAVPAGGAAGGAAAAAAAPPPEEKKEEP
        MSTGEIACSYAALILYDDNIPITAEKIATLVK ANV  V+SYW+SLFAKLAEKRNIGDLILNVGAGGGAAVAAAVPAGGAA G  AAAAAPPPEEKKEEP
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGAGGGAAVAAAVPAGGAAGGAAAAAAAPPPEEKKEEP

Query:  KEESDDDMGFSLFD
        KEESDDDMGFSLFD
Subjt:  KEESDDDMGFSLFD

A0A5D3DB57 60S acidic ribosomal protein P1-like2.7e-4592.98Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGAGGGAAVAAAVPAGGAAGGAAAAAAAPPPEEKKEEP
        MSTGEIACSYAALILYDDNIPITAEKIATLVK ANV  V+SYW+SLFAKLAEKRNIGDLILNVGAGGGAAVAAAVPAGGAA G  AAAAAPPPEEKKEEP
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGAGGGAAVAAAVPAGGAAGGAAAAAAAPPPEEKKEEP

Query:  KEESDDDMGFSLFD
        KEESDDDMGFSLFD
Subjt:  KEESDDDMGFSLFD

A0A6J1CS45 60S acidic ribosomal protein P1-like2.2e-4491.23Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGAGGGAAVAAAVPAGGAAGGAAAAAAAPPPEEKKEEP
        MST EIACSYAA+ILYDD I ITAEKIA LVK ANV GVDSYW+SLFAKLAEKRNIGDLI+NVGAGGGAAVAAAVPAGGAAGG AAAAAAPPPEEKKEEP
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGAGGGAAVAAAVPAGGAAGGAAAAAAAPPPEEKKEEP

Query:  KEESDDDMGFSLFD
        KEESDDDMGFSLFD
Subjt:  KEESDDDMGFSLFD

A0A6J1ICK4 60S acidic ribosomal protein P1-like4.7e-4288.6Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGAGGGAAVAAAVPAGGAAGGAAAAAAAPPPEEKKEEP
        MS GEIACSYAALILYDDNIP+TAEK+ATLVK A V   +SYWFSLFAKLAEKRNIGDLI+NVGAGGGAAVAAAVPAGGA  G AAAAAAPPPEEKKEEP
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGAGGGAAVAAAVPAGGAAGGAAAAAAAPPPEEKKEEP

Query:  KEESDDDMGFSLFD
        KEESDDDMGFSLFD
Subjt:  KEESDDDMGFSLFD

SwissProt top hitse value%identityAlignment
O23095 60S acidic ribosomal protein P1-22.4e-2766.95Show/hide
Query:  MST-GEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGA---GGGAAVAAAVPAGGAAGGAAAAAAAPPPEEK
        MST GE+ACSYA +IL D+ I IT++KIATLVK A V  ++SYW  LFAK+AEKRN+ DLI+NVGA   GGGA V+AA PA  AAGG  AAAAAP  EEK
Subjt:  MST-GEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGA---GGGAAVAAAVPAGGAAGGAAAAAAAPPPEEK

Query:  KEEPKEESDDDMGFSLFD
        K+EP EESD D+GF LFD
Subjt:  KEEPKEESDDDMGFSLFD

P52855 60S acidic ribosomal protein P11.5e-3273.91Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGAGGGAA-VAAAVPAGGAAGGAAAAAAAPPPEEKKEE
        M++GE+AC YAALIL DD I ITAEKIAT+VK AN+  V+SYW +LFAKL EKRN+ DLIL+VG+GGGAA VAAA PAGG     AAAAAAP  EEKKEE
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGAGGGAA-VAAAVPAGGAAGGAAAAAAAPPPEEKKEE

Query:  PKEESDDDMGFSLFD
         KEESDDDMGFSLFD
Subjt:  PKEESDDDMGFSLFD

Q8LCW9 60S acidic ribosomal protein P1-14.1e-2767.52Show/hide
Query:  MST-GEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGA--GGGAAVAAAVPAGGAAGGAAAAAAAPPPEEKK
        MST GE+ACSYA +IL D+ I ITA+KIATLVK A V  ++SYW  LFAK+AEKRN+ DLI+NVGA  GGGA VAAA PA G  GGAAAA AA   E+KK
Subjt:  MST-GEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGA--GGGAAVAAAVPAGGAAGGAAAAAAAPPPEEKK

Query:  EEPKEESDDDMGFSLFD
        +EP EESD D+GF LFD
Subjt:  EEPKEESDDDMGFSLFD

Q8LEQ0 60S acidic ribosomal protein P1-31.8e-2766.67Show/hide
Query:  MST-GEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGA--GGGAAVAAAVPAGGAAGGAAAAAAAPPPEEKK
        MST GE+ACSYA +IL D+ I ITA+KIATLVK A V  ++SYW  LFAK+AEKRN+ DLI+NVGA  GGGA VAAA P   AAGG AAAAA    E+KK
Subjt:  MST-GEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGA--GGGAAVAAAVPAGGAAGGAAAAAAAPPPEEKK

Query:  EEPKEESDDDMGFSLFD
        +EP EESD D+GF LFD
Subjt:  EEPKEESDDDMGFSLFD

Q9HGV0 60S acidic ribosomal protein P11.3e-2563.16Show/hide
Query:  MSTGEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGAGGGAAVAAAVPAGGAAGGAAAAAAAPPPEEKKEEP
        MST E+ACSYAALIL DD + ITA+KI TL+  A V  V+  W SLFAK  E ++I DL+ NVG+GG AA AA    GGAA GAAA A A   EEKKEE 
Subjt:  MSTGEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGAGGGAAVAAAVPAGGAAGGAAAAAAAPPPEEKKEEP

Query:  KEESDDDMGFSLFD
        KEESD+DMGF LFD
Subjt:  KEESDDDMGFSLFD

Arabidopsis top hitse value%identityAlignment
AT1G01100.1 60S acidic ribosomal protein family2.9e-2867.52Show/hide
Query:  MST-GEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGA--GGGAAVAAAVPAGGAAGGAAAAAAAPPPEEKK
        MST GE+ACSYA +IL D+ I ITA+KIATLVK A V  ++SYW  LFAK+AEKRN+ DLI+NVGA  GGGA VAAA PA G  GGAAAA AA   E+KK
Subjt:  MST-GEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGA--GGGAAVAAAVPAGGAAGGAAAAAAAPPPEEKK

Query:  EEPKEESDDDMGFSLFD
        +EP EESD D+GF LFD
Subjt:  EEPKEESDDDMGFSLFD

AT4G00810.1 60S acidic ribosomal protein family1.7e-2866.95Show/hide
Query:  MST-GEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGA---GGGAAVAAAVPAGGAAGGAAAAAAAPPPEEK
        MST GE+ACSYA +IL D+ I IT++KIATLVK A V  ++SYW  LFAK+AEKRN+ DLI+NVGA   GGGA V+AA PA  AAGG  AAAAAP  EEK
Subjt:  MST-GEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGA---GGGAAVAAAVPAGGAAGGAAAAAAAPPPEEK

Query:  KEEPKEESDDDMGFSLFD
        K+EP EESD D+GF LFD
Subjt:  KEEPKEESDDDMGFSLFD

AT4G00810.2 60S acidic ribosomal protein family1.7e-2866.95Show/hide
Query:  MST-GEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGA---GGGAAVAAAVPAGGAAGGAAAAAAAPPPEEK
        MST GE+ACSYA +IL D+ I IT++KIATLVK A V  ++SYW  LFAK+AEKRN+ DLI+NVGA   GGGA V+AA PA  AAGG  AAAAAP  EEK
Subjt:  MST-GEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGA---GGGAAVAAAVPAGGAAGGAAAAAAAPPPEEK

Query:  KEEPKEESDDDMGFSLFD
        K+EP EESD D+GF LFD
Subjt:  KEEPKEESDDDMGFSLFD

AT5G47700.1 60S acidic ribosomal protein family1.3e-2866.67Show/hide
Query:  MST-GEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGA--GGGAAVAAAVPAGGAAGGAAAAAAAPPPEEKK
        MST GE+ACSYA +IL D+ I ITA+KIATLVK A V  ++SYW  LFAK+AEKRN+ DLI+NVGA  GGGA VAAA P   AAGG AAAAA    E+KK
Subjt:  MST-GEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGA--GGGAAVAAAVPAGGAAGGAAAAAAAPPPEEKK

Query:  EEPKEESDDDMGFSLFD
        +EP EESD D+GF LFD
Subjt:  EEPKEESDDDMGFSLFD

AT5G47700.2 60S acidic ribosomal protein family1.3e-2866.67Show/hide
Query:  MST-GEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGA--GGGAAVAAAVPAGGAAGGAAAAAAAPPPEEKK
        MST GE+ACSYA +IL D+ I ITA+KIATLVK A V  ++SYW  LFAK+AEKRN+ DLI+NVGA  GGGA VAAA P   AAGG AAAAA    E+KK
Subjt:  MST-GEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGA--GGGAAVAAAVPAGGAAGGAAAAAAAPPPEEKK

Query:  EEPKEESDDDMGFSLFD
        +EP EESD D+GF LFD
Subjt:  EEPKEESDDDMGFSLFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGACCGGAGAAATTGCTTGCTCCTATGCTGCTCTCATCCTCTACGACGACAATATCCCTATTACCGCGGAAAAGATTGCTACGCTTGTAAAGACAGCTAATGTGCC
CGGTGTGGACTCTTACTGGTTCAGTCTTTTTGCTAAGCTGGCTGAGAAGCGTAACATTGGAGATTTGATCCTCAATGTTGGGGCTGGTGGCGGTGCCGCAGTTGCTGCTG
CTGTCCCAGCTGGCGGAGCTGCTGGTGGCGCTGCTGCTGCAGCAGCTGCTCCTCCACCAGAAGAGAAAAAGGAAGAACCTAAGGAAGAGAGTGACGATGATATGGGATTC
AGTTTGTTTGATTAG
mRNA sequenceShow/hide mRNA sequence
TATAGCGACACGTGTCACATTCCTCTTAAGAAATTGTTAGGTCTTTTTCATTGTATATGTGCCTCCAACTTTTCAGCTTCTTTAGTTGGTTGTTTTGACGATTTCAACGC
TCTCGGACCAGCTAAGCTAGGTTGGCTTCTATTGGGCCGTGTATTCTGTTTGGGCCTGTCGCTCCAGAAATAATCAAGCCCATATCTGGAGCTTCAATAAAAACCAAGTT
TGAGGGATTTCTCAAACCCTAGAACGCTTCATATTGCGCAGCGAAGAAGAGCCGTTTCATCTGTGAAAAATGTCGACCGGAGAAATTGCTTGCTCCTATGCTGCTCTCAT
CCTCTACGACGACAATATCCCTATTACCGCGGAAAAGATTGCTACGCTTGTAAAGACAGCTAATGTGCCCGGTGTGGACTCTTACTGGTTCAGTCTTTTTGCTAAGCTGG
CTGAGAAGCGTAACATTGGAGATTTGATCCTCAATGTTGGGGCTGGTGGCGGTGCCGCAGTTGCTGCTGCTGTCCCAGCTGGCGGAGCTGCTGGTGGCGCTGCTGCTGCA
GCAGCTGCTCCTCCACCAGAAGAGAAAAAGGAAGAACCTAAGGAAGAGAGTGACGATGATATGGGATTCAGTTTGTTTGATTAGGTCGAGAAATGTCTTCGCATATTTTG
TTCTAGGTTGATTATCTTTTAAATGCCCGAGGGGGCCTTGTTATTTTACAGATATGTAATTTTGAACATCCGCGACATATTTGCCAGAAGTTTTGATTTGAATATGATCT
GATTTCATCCTTTGTTCGTTATTTTTCTGTAGTTGCGATGTGACGATATGTTGTTGCATCTCCTTAGCATGCTTCCTCTGAATCTTTTACTTTTTGTTGCTCAAATTCTT
CCATGCTGTGAGTTTAGACTGTAACTGGCGATAATTGCATCGTTTTAGATTGTAGTTGACTTCTAATATCAAGTAACATTTGACAAAGG
Protein sequenceShow/hide protein sequence
MSTGEIACSYAALILYDDNIPITAEKIATLVKTANVPGVDSYWFSLFAKLAEKRNIGDLILNVGAGGGAAVAAAVPAGGAAGGAAAAAAAPPPEEKKEEPKEESDDDMGF
SLFD