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Lsi05G022180 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G022180
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUvrABC system protein C
Genome locationchr05:28736617..28737111
RNA-Seq ExpressionLsi05G022180
SyntenyLsi05G022180
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7028490.1 hypothetical protein SDJN02_09671, partial [Cucurbita argyrosperma subsp. argyrosperma]7.6e-5667.78Show/hide
Query:  MVKVVTGNGGIMELYTPITAECITGEYPGHAIFKSRSIFSEALHHKEELQGGQVYYLLPLNP----SAVEPCTLLSNSTPYRMSTADTQTKAAD------
        +VKVVT +GGIMELY PITAECITGEYPGHAIFKSRSIFSE L HK+EL  GQVYYLLPLNP    + +E       STPYRMST ++Q   A       
Subjt:  MVKVVTGNGGIMELYTPITAECITGEYPGHAIFKSRSIFSEALHHKEELQGGQVYYLLPLNP----SAVEPCTLLSNSTPYRMSTADTQTKAAD------

Query:  --HVFPNYNNAGVWKVKLVICPQQLSQILSHHNRTEELIENVRTVAKCGNAVESAANSDHSSVAGSWK----DKPHYGFK
           VFP Y++ GVWKVKLVICP+QLS+IL   NRTEELIENVRTVAKCGN V SAA+SDHSSVAGSWK    DK  YG K
Subjt:  --HVFPNYNNAGVWKVKLVICPQQLSQILSHHNRTEELIENVRTVAKCGNAVESAANSDHSSVAGSWK----DKPHYGFK

XP_011650622.1 uncharacterized protein LOC105434805 [Cucumis sativus]3.3e-6779.88Show/hide
Query:  MVKVVTGNGGIMELYTPITAECITGEYPGHAIFKSRSIFSEALHHKEELQGGQVYYLLPLNPSAVEPCTLLSNSTPYRMSTADTQTKAADHVFPNYNNAG
        +VKVVT  GGIMELYTPITAECITGEYPGHAIFK+RSIFS+ALHHKEEL+GGQVYYLLPLN   +        STPYRMSTA++QTK    +FP YNNAG
Subjt:  MVKVVTGNGGIMELYTPITAECITGEYPGHAIFKSRSIFSEALHHKEELQGGQVYYLLPLNPSAVEPCTLLSNSTPYRMSTADTQTKAADHVFPNYNNAG

Query:  VWKVKLVICPQQLSQILSHHNRTEELIENVRTVAKCGNAVESAANSDHSSVAGSWKDKPHYGFK
        VWKV LVICPQQLSQILS +NRT+ELI+NVRTVAKCGNA+ESA+NSDHSSVAGSWKDKPHYGFK
Subjt:  VWKVKLVICPQQLSQILSHHNRTEELIENVRTVAKCGNAVESAANSDHSSVAGSWKDKPHYGFK

XP_016898947.1 PREDICTED: uncharacterized protein LOC107990386 [Cucumis melo]4.6e-6982.32Show/hide
Query:  MVKVVTGNGGIMELYTPITAECITGEYPGHAIFKSRSIFSEALHHKEELQGGQVYYLLPLNPSAVEPCTLLSNSTPYRMSTADTQTKAADHVFPNYNNAG
        MVKVVT  GGIMELYTPITAECITGEYPGHAIFKSRSIFSEALHHKEEL+GGQVYYLLPLN         +  STPYRMSTA++QTK    +FP YNNAG
Subjt:  MVKVVTGNGGIMELYTPITAECITGEYPGHAIFKSRSIFSEALHHKEELQGGQVYYLLPLNPSAVEPCTLLSNSTPYRMSTADTQTKAADHVFPNYNNAG

Query:  VWKVKLVICPQQLSQILSHHNRTEELIENVRTVAKCGNAVESAANSDHSSVAGSWKDKPHYGFK
        VWKV LVICPQQLSQILS HNRT+ELI+NVRTVAKCGNA+ESA+NSDHSSVAGSWKDKPHYGFK
Subjt:  VWKVKLVICPQQLSQILSHHNRTEELIENVRTVAKCGNAVESAANSDHSSVAGSWKDKPHYGFK

XP_022962561.1 uncharacterized protein LOC111462928 [Cucurbita moschata]4.5e-5668.33Show/hide
Query:  MVKVVTGNGGIMELYTPITAECITGEYPGHAIFKSRSIFSEALHHKEELQGGQVYYLLPLNP----SAVEPCTLLSNSTPYRMSTADTQTKAAD------
        MVKVVT +GGIMELY PITAECITGEYPGHAIFKSRSIFSE L HK+EL  GQVYYLLPLNP    + +E       STPYRMST ++Q   A       
Subjt:  MVKVVTGNGGIMELYTPITAECITGEYPGHAIFKSRSIFSEALHHKEELQGGQVYYLLPLNP----SAVEPCTLLSNSTPYRMSTADTQTKAAD------

Query:  --HVFPNYNNAGVWKVKLVICPQQLSQILSHHNRTEELIENVRTVAKCGNAVESAANSDHSSVAGSWK----DKPHYGFK
           VFP Y++ GVWKVKLVICP+QLS+IL   NRTEELIENVRTVAKCGN V SAA+SDHSSVAGSWK    DK  YG K
Subjt:  --HVFPNYNNAGVWKVKLVICPQQLSQILSHHNRTEELIENVRTVAKCGNAVESAANSDHSSVAGSWK----DKPHYGFK

XP_023540170.1 uncharacterized protein LOC111800623 [Cucurbita pepo subsp. pepo]2.6e-5667.78Show/hide
Query:  MVKVVTGNGGIMELYTPITAECITGEYPGHAIFKSRSIFSEALHHKEELQGGQVYYLLPLNP----SAVEPCTLLSNSTPYRMSTADTQTKAAD------
        +VKVVT +GGIMELY PITAECITGEYPGHAIF SRSIFSE L HK+EL  GQVYYLLPLNP    + +E       STPYRMST ++Q   A       
Subjt:  MVKVVTGNGGIMELYTPITAECITGEYPGHAIFKSRSIFSEALHHKEELQGGQVYYLLPLNP----SAVEPCTLLSNSTPYRMSTADTQTKAAD------

Query:  --HVFPNYNNAGVWKVKLVICPQQLSQILSHHNRTEELIENVRTVAKCGNAVESAANSDHSSVAGSWK----DKPHYGFK
           VFP Y++ GVWKVKLVICP+QLS+IL   NRTEELIENVRTVAKCGN V SAA+SDHSSVAGSWK    DKP YG K
Subjt:  --HVFPNYNNAGVWKVKLVICPQQLSQILSHHNRTEELIENVRTVAKCGNAVESAANSDHSSVAGSWK----DKPHYGFK

TrEMBL top hitse value%identityAlignment
A0A0A0L3K9 Uncharacterized protein1.6e-6779.88Show/hide
Query:  MVKVVTGNGGIMELYTPITAECITGEYPGHAIFKSRSIFSEALHHKEELQGGQVYYLLPLNPSAVEPCTLLSNSTPYRMSTADTQTKAADHVFPNYNNAG
        +VKVVT  GGIMELYTPITAECITGEYPGHAIFK+RSIFS+ALHHKEEL+GGQVYYLLPLN   +        STPYRMSTA++QTK    +FP YNNAG
Subjt:  MVKVVTGNGGIMELYTPITAECITGEYPGHAIFKSRSIFSEALHHKEELQGGQVYYLLPLNPSAVEPCTLLSNSTPYRMSTADTQTKAADHVFPNYNNAG

Query:  VWKVKLVICPQQLSQILSHHNRTEELIENVRTVAKCGNAVESAANSDHSSVAGSWKDKPHYGFK
        VWKV LVICPQQLSQILS +NRT+ELI+NVRTVAKCGNA+ESA+NSDHSSVAGSWKDKPHYGFK
Subjt:  VWKVKLVICPQQLSQILSHHNRTEELIENVRTVAKCGNAVESAANSDHSSVAGSWKDKPHYGFK

A0A1S4DSH2 uncharacterized protein LOC1079903862.2e-6982.32Show/hide
Query:  MVKVVTGNGGIMELYTPITAECITGEYPGHAIFKSRSIFSEALHHKEELQGGQVYYLLPLNPSAVEPCTLLSNSTPYRMSTADTQTKAADHVFPNYNNAG
        MVKVVT  GGIMELYTPITAECITGEYPGHAIFKSRSIFSEALHHKEEL+GGQVYYLLPLN         +  STPYRMSTA++QTK    +FP YNNAG
Subjt:  MVKVVTGNGGIMELYTPITAECITGEYPGHAIFKSRSIFSEALHHKEELQGGQVYYLLPLNPSAVEPCTLLSNSTPYRMSTADTQTKAADHVFPNYNNAG

Query:  VWKVKLVICPQQLSQILSHHNRTEELIENVRTVAKCGNAVESAANSDHSSVAGSWKDKPHYGFK
        VWKV LVICPQQLSQILS HNRT+ELI+NVRTVAKCGNA+ESA+NSDHSSVAGSWKDKPHYGFK
Subjt:  VWKVKLVICPQQLSQILSHHNRTEELIENVRTVAKCGNAVESAANSDHSSVAGSWKDKPHYGFK

A0A5D3DB01 Uncharacterized protein2.2e-6982.32Show/hide
Query:  MVKVVTGNGGIMELYTPITAECITGEYPGHAIFKSRSIFSEALHHKEELQGGQVYYLLPLNPSAVEPCTLLSNSTPYRMSTADTQTKAADHVFPNYNNAG
        MVKVVT  GGIMELYTPITAECITGEYPGHAIFKSRSIFSEALHHKEEL+GGQVYYLLPLN         +  STPYRMSTA++QTK    +FP YNNAG
Subjt:  MVKVVTGNGGIMELYTPITAECITGEYPGHAIFKSRSIFSEALHHKEELQGGQVYYLLPLNPSAVEPCTLLSNSTPYRMSTADTQTKAADHVFPNYNNAG

Query:  VWKVKLVICPQQLSQILSHHNRTEELIENVRTVAKCGNAVESAANSDHSSVAGSWKDKPHYGFK
        VWKV LVICPQQLSQILS HNRT+ELI+NVRTVAKCGNA+ESA+NSDHSSVAGSWKDKPHYGFK
Subjt:  VWKVKLVICPQQLSQILSHHNRTEELIENVRTVAKCGNAVESAANSDHSSVAGSWKDKPHYGFK

A0A6J1HDL7 uncharacterized protein LOC1114629282.2e-5668.33Show/hide
Query:  MVKVVTGNGGIMELYTPITAECITGEYPGHAIFKSRSIFSEALHHKEELQGGQVYYLLPLNP----SAVEPCTLLSNSTPYRMSTADTQTKAAD------
        MVKVVT +GGIMELY PITAECITGEYPGHAIFKSRSIFSE L HK+EL  GQVYYLLPLNP    + +E       STPYRMST ++Q   A       
Subjt:  MVKVVTGNGGIMELYTPITAECITGEYPGHAIFKSRSIFSEALHHKEELQGGQVYYLLPLNP----SAVEPCTLLSNSTPYRMSTADTQTKAAD------

Query:  --HVFPNYNNAGVWKVKLVICPQQLSQILSHHNRTEELIENVRTVAKCGNAVESAANSDHSSVAGSWK----DKPHYGFK
           VFP Y++ GVWKVKLVICP+QLS+IL   NRTEELIENVRTVAKCGN V SAA+SDHSSVAGSWK    DK  YG K
Subjt:  --HVFPNYNNAGVWKVKLVICPQQLSQILSHHNRTEELIENVRTVAKCGNAVESAANSDHSSVAGSWK----DKPHYGFK

A0A6J1IAU7 uncharacterized protein LOC1114728896.3e-5667.78Show/hide
Query:  MVKVVTGNGGIMELYTPITAECITGEYPGHAIFKSRSIFSEALHHKEELQGGQVYYLLPLNP----SAVEPCTLLSNSTPYRMSTADTQ--------TKA
        +VKVVT +GGIMELY PITAECITGEYPGHAIFKSRSIFSE L HK+EL  GQVYYLLPLNP    + +E       STPYRMST ++Q         +A
Subjt:  MVKVVTGNGGIMELYTPITAECITGEYPGHAIFKSRSIFSEALHHKEELQGGQVYYLLPLNP----SAVEPCTLLSNSTPYRMSTADTQ--------TKA

Query:  ADHVFPNYNNAGVWKVKLVICPQQLSQILSHHNRTEELIENVRTVAKCGNAVESAANSDHSSVAGSWK----DKPHYGFK
           VFP Y++ GVWKVKLVICP+QLS+IL   NRTEELIENVRTVAKCGN V SAA+SDHSSVAGSWK    DK  YG K
Subjt:  ADHVFPNYNNAGVWKVKLVICPQQLSQILSHHNRTEELIENVRTVAKCGNAVESAANSDHSSVAGSWK----DKPHYGFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64700.1 unknown protein9.7e-1732.22Show/hide
Query:  MVKVVTGNGGIMELYTPITAECITGEYPGHAIFKSRSIFSEALHHKEELQGGQVYYLLPLNPS-----AVEPCTLLSNS------TPYRMS---TADTQT
        ++KV+  +GG++E Y+P+TA  ++  + GHA+F +  +  + L H   L  GQ YYL P   S      V  C + SNS      TPYRMS         
Subjt:  MVKVVTGNGGIMELYTPITAECITGEYPGHAIFKSRSIFSEALHHKEELQGGQVYYLLPLNPS-----AVEPCTLLSNS------TPYRMS---TADTQT

Query:  KAADHVFPNYNN------------------AGVWKVKLVICPQQLSQILSHHNRTEELIENVRTVAKCGNAVESAANSDH
        ++   VF   ++                    +WKV L+I  ++L QILS   RT ELIE+VR VAK   +  ++++S++
Subjt:  KAADHVFPNYNN------------------AGVWKVKLVICPQQLSQILSHHNRTEELIENVRTVAKCGNAVESAANSDH

AT3G61920.1 unknown protein2.5e-3351.19Show/hide
Query:  MVKVVTGNGGIMELYTPITAECITGEYPGHAIFKSRSI--FSEALHHKEELQGGQVYYLLPLNPSAVEPCTLLSN---STPYRMSTADTQTKAADHVFPN
        ++KVVT NGG+MEL+ PI AE IT E+PGH I  S S+   S  L H EEL  G +YYLLPL+ SA     L S+   STPYRMS   T   AA     +
Subjt:  MVKVVTGNGGIMELYTPITAECITGEYPGHAIFKSRSI--FSEALHHKEELQGGQVYYLLPLNPSAVEPCTLLSN---STPYRMSTADTQTKAADHVFPN

Query:  YNNAGVWKVKLVICPQQLSQILSHHNRTEELIENVRTVAK-----CGNAVESAANSDHSSVAGSWKDK
            GVWKV+LVI P+QL++IL+    TE L+E+VRTVAK     CG  V S ANSD  SV  S+K K
Subjt:  YNNAGVWKVKLVICPQQLSQILSHHNRTEELIENVRTVAK-----CGNAVESAANSDHSSVAGSWKDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAAGTAGTGACCGGTAATGGCGGAATAATGGAGTTGTACACGCCAATAACGGCGGAGTGCATTACGGGTGAATATCCAGGGCACGCCATTTTCAAAAGCCGAAG
CATATTCTCAGAGGCCCTTCACCACAAGGAGGAGCTTCAGGGCGGCCAAGTCTACTATCTCCTCCCGCTCAACCCCTCCGCCGTAGAACCCTGCACCCTTCTATCCAACT
CCACGCCCTATCGCATGTCCACCGCCGACACCCAAACCAAGGCCGCAGATCATGTGTTTCCAAACTACAACAACGCAGGTGTGTGGAAGGTCAAGTTGGTGATTTGCCCC
CAACAACTCTCCCAAATTTTATCTCACCACAATCGAACGGAGGAGTTGATCGAAAACGTCAGGACCGTAGCCAAGTGTGGAAACGCCGTCGAATCTGCTGCCAACTCCGA
CCATTCCAGCGTCGCAGGTAGTTGGAAGGATAAGCCTCACTATGGATTCAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAAAGTAGTGACCGGTAATGGCGGAATAATGGAGTTGTACACGCCAATAACGGCGGAGTGCATTACGGGTGAATATCCAGGGCACGCCATTTTCAAAAGCCGAAG
CATATTCTCAGAGGCCCTTCACCACAAGGAGGAGCTTCAGGGCGGCCAAGTCTACTATCTCCTCCCGCTCAACCCCTCCGCCGTAGAACCCTGCACCCTTCTATCCAACT
CCACGCCCTATCGCATGTCCACCGCCGACACCCAAACCAAGGCCGCAGATCATGTGTTTCCAAACTACAACAACGCAGGTGTGTGGAAGGTCAAGTTGGTGATTTGCCCC
CAACAACTCTCCCAAATTTTATCTCACCACAATCGAACGGAGGAGTTGATCGAAAACGTCAGGACCGTAGCCAAGTGTGGAAACGCCGTCGAATCTGCTGCCAACTCCGA
CCATTCCAGCGTCGCAGGTAGTTGGAAGGATAAGCCTCACTATGGATTCAAATGA
Protein sequenceShow/hide protein sequence
MVKVVTGNGGIMELYTPITAECITGEYPGHAIFKSRSIFSEALHHKEELQGGQVYYLLPLNPSAVEPCTLLSNSTPYRMSTADTQTKAADHVFPNYNNAGVWKVKLVICP
QQLSQILSHHNRTEELIENVRTVAKCGNAVESAANSDHSSVAGSWKDKPHYGFK