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Lsi05G022280 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G022280
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X2
Genome locationchr05:28840177..28840434
RNA-Seq ExpressionLsi05G022280
SyntenyLsi05G022280
Gene Ontology termsGO:0009723 - response to ethylene (biological process)
GO:0009751 - response to salicylic acid (biological process)
GO:0042742 - defense response to bacterium (biological process)
GO:0043069 - negative regulation of programmed cell death (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048806.1 protein VASCULAR ASSOCIATED DEATH 1 [Cucumis melo var. makuwa]5.0e-2784.34Show/hide
Query:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQVHTATSLHSKFAPVSENY
        AAA++AAA E IELPRPRDKLP NLSPDSASCYPPESSS SADRISDT+ESS  PDGFHEDVEIQVHTATSL  KFAP  ENY
Subjt:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQVHTATSLHSKFAPVSENY
XP_016899022.1 PREDICTED: protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X5 [Cucumis melo]1.0e-1986.36Show/hide
Query:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQV
        AAA++AAA E IELPRPRDKLP NLSPDSASCYPPESSS SADRISDT+ESS  PDGFHEDVEIQV
Subjt:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQV
XP_038874389.1 protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X1 [Benincasa hispida]4.5e-2087.69Show/hide
Query:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQ
        AAA++ AAAE IELPRPRDKLP+NLSPDSASCYPPESSS SADRISDTNESS  PDGFHEDVEIQ
Subjt:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQ
XP_038874398.1 protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X2 [Benincasa hispida]4.5e-2087.69Show/hide
Query:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQ
        AAA++ AAAE IELPRPRDKLP+NLSPDSASCYPPESSS SADRISDTNESS  PDGFHEDVEIQ
Subjt:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQ
XP_038874406.1 protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X3 [Benincasa hispida]4.5e-2087.69Show/hide
Query:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQ
        AAA++ AAAE IELPRPRDKLP+NLSPDSASCYPPESSS SADRISDTNESS  PDGFHEDVEIQ
Subjt:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQ
TrEMBL top hitse value%identityAlignment
A0A1S3AUF8 protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X31.9e-1986.15Show/hide
Query:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQ
        AAA++AAA E IELPRPRDKLP NLSPDSASCYPPESSS SADRISDT+ESS  PDGFHEDVEIQ
Subjt:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQ
A0A1S3AUS4 protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X11.9e-1986.15Show/hide
Query:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQ
        AAA++AAA E IELPRPRDKLP NLSPDSASCYPPESSS SADRISDT+ESS  PDGFHEDVEIQ
Subjt:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQ
A0A1S4DSQ3 protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X54.9e-2086.36Show/hide
Query:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQV
        AAA++AAA E IELPRPRDKLP NLSPDSASCYPPESSS SADRISDT+ESS  PDGFHEDVEIQV
Subjt:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQV
A0A1S4DSQ4 protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X41.9e-1986.15Show/hide
Query:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQ
        AAA++AAA E IELPRPRDKLP NLSPDSASCYPPESSS SADRISDT+ESS  PDGFHEDVEIQ
Subjt:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQ
A0A5D3DB36 Protein VASCULAR ASSOCIATED DEATH 12.4e-2784.34Show/hide
Query:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQVHTATSLHSKFAPVSENY
        AAA++AAA E IELPRPRDKLP NLSPDSASCYPPESSS SADRISDT+ESS  PDGFHEDVEIQVHTATSL  KFAP  ENY
Subjt:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQVHTATSLHSKFAPVSENY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCTGCGGCCTCAGCGGCGGCGGCGGCTGAGAGAATTGAACTGCCTCGACCACGGGACAAACTCCCAATGAACCTTTCTCCAGACTCTGCTTCCTGCTACCCCCC
CGAATCATCTTCTTTCTCAGCTGACCGCATATCCGATACCAACGAGTCATCTCCTTTGCCTGACGGTTTCCACGAGGACGTCGAAATTCAGGTACATACTGCCACCTCTC
TCCATTCTAAATTTGCACCCGTTTCCGAGAATTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCTGCGGCCTCAGCGGCGGCGGCGGCTGAGAGAATTGAACTGCCTCGACCACGGGACAAACTCCCAATGAACCTTTCTCCAGACTCTGCTTCCTGCTACCCCCC
CGAATCATCTTCTTTCTCAGCTGACCGCATATCCGATACCAACGAGTCATCTCCTTTGCCTGACGGTTTCCACGAGGACGTCGAAATTCAGGTACATACTGCCACCTCTC
TCCATTCTAAATTTGCACCCGTTTCCGAGAATTATTGA
Protein sequenceShow/hide protein sequence
MAAAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQVHTATSLHSKFAPVSENY