; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G022300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G022300
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionethylene-responsive transcription factor 13-like
Genome locationchr05:28858778..28860206
RNA-Seq ExpressionLsi05G022300
SyntenyLsi05G022300
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009873 - ethylene-activated signaling pathway (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily
IPR044808 - Ethylene-responsive transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048804.1 putative Ethylene-responsive element binding factor 13 [Cucumis melo var. makuwa]7.5e-4366.87Show/hide
Query:  SNSNSSSLEG-SSDLFVLERIRRHLLEDELG----NNVDEEGRWEWGNNSTGGG-SKSNDNNNNMVMVELGEEMRGKSGKGSSIIWSSDDQRDQIRARGL
        S+S+SSSLEG SSDLF+LE+IRRHLLED+LG    NN  E+G   +  + +G G   SN+NNNNMV     ++M       SSII   D+  ++ R RGL
Subjt:  SNSNSSSLEG-SSDLFVLERIRRHLLEDELG----NNVDEEGRWEWGNNSTGGG-SKSNDNNNNMVMVELGEEMRGKSGKGSSIIWSSDDQRDQIRARGL

Query:  QFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTS
        QFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPH+I+S +
Subjt:  QFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTS

KAE8650208.1 hypothetical protein Csa_010866 [Cucumis sativus]3.6e-3761.25Show/hide
Query:  NSNSSSLEG-SSDLFVLERIRRHLLEDELGNNVDEEGRWEWGNNSTGGGSKSNDNNNNMVMVELGEEMRGKSGKGSSIIWSSDDQRDQIRARGLQFRGVR
        +S+SSSLEG SSDLF LE+IRRHLLED+LG                    K + +NN    VE G            II  + +++ Q R RGLQFRGVR
Subjt:  NSNSSSLEG-SSDLFVLERIRRHLLEDELGNNVDEEGRWEWGNNSTGGGSKSNDNNNNMVMVELGEEMRGKSGKGSSIIWSSDDQRDQIRARGLQFRGVR

Query:  RRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTS
        RRPWGKYAAEIRDPS+KGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPH+I+S +
Subjt:  RRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTS

XP_004134277.2 ethylene-responsive transcription factor 1 [Cucumis sativus]1.2e-4562.3Show/hide
Query:  DTECGSSKL-----RQKRIRSRKMWSNSNSSSLEG-SSDLFVLERIRRHLLEDELG-----NNVDEEGRWEWGNNSTGGGSKSNDNNNNMVMVELGEEMR
        +T+C S  L     + K+IRSRKM S S+SSSLEG SSDLF LE+IRRHLLED+LG     NNV E+G   +  + +G G + ++NNNNMV     ++M 
Subjt:  DTECGSSKL-----RQKRIRSRKMWSNSNSSSLEG-SSDLFVLERIRRHLLEDELG-----NNVDEEGRWEWGNNSTGGGSKSNDNNNNMVMVELGEEMR

Query:  GKSGKGSSIIWSSDDQRDQIRARGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTS
              S II  + +++ Q R RGLQFRGVRRRPWGKYAAEIRDPS+KGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPH+I+S +
Subjt:  GKSGKGSSIIWSSDDQRDQIRARGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTS

XP_022950239.1 ethylene-responsive transcription factor 1-like [Cucurbita moschata]7.6e-3553.61Show/hide
Query:  MWSNSNSSSLEGSSDLFVLERIRRHLLEDELGNNVDEEGRWEWGNNSTGGGSKSNDNNNNMVMVELGEEMRGKSGKGSSIIWSSDDQRDQIRARGLQFRG
        M SNSN S    SS++F+LE IRRHLLEDEL    D  G         G  + S  +++ +  +E         GKGSSI             RGLQFRG
Subjt:  MWSNSNSSSLEGSSDLFVLERIRRHLLEDELGNNVDEEGRWEWGNNSTGGGSKSNDNNNNMVMVELGEEMRGKSGKGSSIIWSSDDQRDQIRARGLQFRG

Query:  VRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTS-----NNDYPRRSCKRSSPNCNSPRTPPPLFN
        VRRRPWGKYAAEIRDP+RKGARIWLGTY TA++AALAYDRAAFQMRGAKAKLNFPHMI S          YP+R+         SP +PPPLF+
Subjt:  VRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTS-----NNDYPRRSCKRSSPNCNSPRTPPPLFN

XP_022974259.1 ethylene-responsive transcription factor 13-like [Cucurbita maxima]4.0e-3653.57Show/hide
Query:  MWSNSNSSSLEGSSDLFVLERIRRHLLEDELGNNVDEEGRWEWGNNSTGGGSKSNDNNNNMVMVELGEEMRG--KSGKGSSIIWSSDDQRDQIRARGLQF
        M SNSN S    SS++F+LE IRRHLLEDEL              +S GG  K      N   ++ G+ +      GKGSSI             RGLQF
Subjt:  MWSNSNSSSLEGSSDLFVLERIRRHLLEDELGNNVDEEGRWEWGNNSTGGGSKSNDNNNNMVMVELGEEMRG--KSGKGSSIIWSSDDQRDQIRARGLQF

Query:  RGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTS-----NNDYPRRSCKRSSPNCNSPRTPPPLFN
        RGVRRRPWGKYAAEIRDP+RKGARIWLGTY TA++AALAYDRAAFQMRGAKAKLNFPHMI S          YP+R+         SP +PPPLF+
Subjt:  RGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTS-----NNDYPRRSCKRSSPNCNSPRTPPPLFN

TrEMBL top hitse value%identityAlignment
A0A0A0L893 AP2/ERF domain-containing protein1.1e-4264.85Show/hide
Query:  NSNSSSLEG-SSDLFVLERIRRHLLEDELG-----NNVDEEGRWEWGNNSTGGGSKSNDNNNNMVMVELGEEMRGKSGKGSSIIWSSDDQRDQIRARGLQ
        +S+SSSLEG SSDLF LE+IRRHLLED+LG     NNV E+G   +  + +G G + ++NNNNMV     ++M       S II  + +++ Q R RGLQ
Subjt:  NSNSSSLEG-SSDLFVLERIRRHLLEDELG-----NNVDEEGRWEWGNNSTGGGSKSNDNNNNMVMVELGEEMRGKSGKGSSIIWSSDDQRDQIRARGLQ

Query:  FRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTS
        FRGVRRRPWGKYAAEIRDPS+KGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPH+I+S +
Subjt:  FRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTS

A0A5D2I7H1 AP2/ERF domain-containing protein4.8e-2757.72Show/hide
Query:  VMVELGEEMRGKSGKGSSIIWSSDDQRDQIRARGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIAST
        V+V  GEE  G       I+    +    +R RG+ F+GVRRRPWGKYAAEIRDP R GARIWLGTY T +DAALAYDRAAF+MRGAKAKLNFPH+I S 
Subjt:  VMVELGEEMRGKSGKGSSIIWSSDDQRDQIRARGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIAST

Query:  SNNDYPRRSCKRSSPNCNSPRTP
        + +D  R   +R SP  ++  TP
Subjt:  SNNDYPRRSCKRSSPNCNSPRTP

A0A5D3DAY8 Putative Ethylene-responsive element binding factor 133.6e-4366.87Show/hide
Query:  SNSNSSSLEG-SSDLFVLERIRRHLLEDELG----NNVDEEGRWEWGNNSTGGG-SKSNDNNNNMVMVELGEEMRGKSGKGSSIIWSSDDQRDQIRARGL
        S+S+SSSLEG SSDLF+LE+IRRHLLED+LG    NN  E+G   +  + +G G   SN+NNNNMV     ++M       SSII   D+  ++ R RGL
Subjt:  SNSNSSSLEG-SSDLFVLERIRRHLLEDELG----NNVDEEGRWEWGNNSTGGG-SKSNDNNNNMVMVELGEEMRGKSGKGSSIIWSSDDQRDQIRARGL

Query:  QFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTS
        QFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPH+I+S +
Subjt:  QFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTS

A0A6J1GF81 ethylene-responsive transcription factor 1-like3.7e-3553.61Show/hide
Query:  MWSNSNSSSLEGSSDLFVLERIRRHLLEDELGNNVDEEGRWEWGNNSTGGGSKSNDNNNNMVMVELGEEMRGKSGKGSSIIWSSDDQRDQIRARGLQFRG
        M SNSN S    SS++F+LE IRRHLLEDEL    D  G         G  + S  +++ +  +E         GKGSSI             RGLQFRG
Subjt:  MWSNSNSSSLEGSSDLFVLERIRRHLLEDELGNNVDEEGRWEWGNNSTGGGSKSNDNNNNMVMVELGEEMRGKSGKGSSIIWSSDDQRDQIRARGLQFRG

Query:  VRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTS-----NNDYPRRSCKRSSPNCNSPRTPPPLFN
        VRRRPWGKYAAEIRDP+RKGARIWLGTY TA++AALAYDRAAFQMRGAKAKLNFPHMI S          YP+R+         SP +PPPLF+
Subjt:  VRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTS-----NNDYPRRSCKRSSPNCNSPRTPPPLFN

A0A6J1IH30 ethylene-responsive transcription factor 13-like1.9e-3653.57Show/hide
Query:  MWSNSNSSSLEGSSDLFVLERIRRHLLEDELGNNVDEEGRWEWGNNSTGGGSKSNDNNNNMVMVELGEEMRG--KSGKGSSIIWSSDDQRDQIRARGLQF
        M SNSN S    SS++F+LE IRRHLLEDEL              +S GG  K      N   ++ G+ +      GKGSSI             RGLQF
Subjt:  MWSNSNSSSLEGSSDLFVLERIRRHLLEDELGNNVDEEGRWEWGNNSTGGGSKSNDNNNNMVMVELGEEMRG--KSGKGSSIIWSSDDQRDQIRARGLQF

Query:  RGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTS-----NNDYPRRSCKRSSPNCNSPRTPPPLFN
        RGVRRRPWGKYAAEIRDP+RKGARIWLGTY TA++AALAYDRAAFQMRGAKAKLNFPHMI S          YP+R+         SP +PPPLF+
Subjt:  RGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTS-----NNDYPRRSCKRSSPNCNSPRTPPPLFN

SwissProt top hitse value%identityAlignment
O04681 Pathogenesis-related genes transcriptional activator PTI51.2e-2273.53Show/hide
Query:  GLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTS
        G ++RGVRRRPWGKYAAEIRD +R GAR+WLGT+ TA++AALAYDRAAF+MRGAKA LNFP  I + S
Subjt:  GLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTS

Q40476 Ethylene-responsive transcription factor 11.2e-2259.04Show/hide
Query:  RGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTSNNDYPRRSCKRSSP
        RG  +RGVRRRPWGK+AAEIRDP++ GAR+WLGTY T ++AA+AYD+AA++MRG+KA LNFPH I           + +R+SP
Subjt:  RGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTSNNDYPRRSCKRSSP

Q40479 Ethylene-responsive transcription factor 26.9e-2361.45Show/hide
Query:  RGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTSNNDYPRRSCKRSSP
        +G  +RGVR+RPWGK+AAEIRDP++ GAR+WLGTY TA++AALAYD+AA++MRG+KA LNFPH I   +  +  R + KR SP
Subjt:  RGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTSNNDYPRRSCKRSSP

Q8L9K1 Ethylene-responsive transcription factor 133.9e-2666.27Show/hide
Query:  RARGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTSNNDYPRRSCKRS
        R +G+Q+RGVRRRPWGK+AAEIRDP + GAR+WLGTY T +DAA+AYDRAAFQ+RG+KAKLNFPH+I S        R  +RS
Subjt:  RARGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTSNNDYPRRSCKRS

Q9LW50 Ethylene-responsive transcription factor 22.6e-2257.61Show/hide
Query:  RGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTSNNDYPRRSCKRSSPNCNSPRTPP
        +G  +RGVR+RPWGK+AAEIRDP++ GAR+WLGTY TA++AALAYD+AA++MRG+KA LNFPH I   +  +  R + KR SP   S    P
Subjt:  RGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTSNNDYPRRSCKRSSPNCNSPRTPP

Arabidopsis top hitse value%identityAlignment
AT2G33710.1 Integrase-type DNA-binding superfamily protein2.7e-2248.72Show/hide
Query:  GSSIIWSSDDQ------RDQIRARGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTSNNDYPRRS
        G  I  S DDQ      +++  +R   +RGVR+RPWGK+AAEIRDP+ K AR+WLGT+ TA++AALAYD+AAF+ RG KAKLNFP  I       YP  +
Subjt:  GSSIIWSSDDQ------RDQIRARGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTSNNDYPRRS

Query:  CKRSSPNCNSPRTPPPL
                  P  PPP+
Subjt:  CKRSSPNCNSPRTPPPL

AT2G33710.2 Integrase-type DNA-binding superfamily protein2.7e-2248.72Show/hide
Query:  GSSIIWSSDDQ------RDQIRARGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTSNNDYPRRS
        G  I  S DDQ      +++  +R   +RGVR+RPWGK+AAEIRDP+ K AR+WLGT+ TA++AALAYD+AAF+ RG KAKLNFP  I       YP  +
Subjt:  GSSIIWSSDDQ------RDQIRARGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTSNNDYPRRS

Query:  CKRSSPNCNSPRTPPPL
                  P  PPP+
Subjt:  CKRSSPNCNSPRTPPPL

AT2G44840.1 ethylene-responsive element binding factor 132.8e-2766.27Show/hide
Query:  RARGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTSNNDYPRRSCKRS
        R +G+Q+RGVRRRPWGK+AAEIRDP + GAR+WLGTY T +DAA+AYDRAAFQ+RG+KAKLNFPH+I S        R  +RS
Subjt:  RARGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTSNNDYPRRSCKRS

AT3G23220.1 Integrase-type DNA-binding superfamily protein6.0e-2273.77Show/hide
Query:  LQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPH
        +++RGVR+RPWGKYAAEIRD +R GAR+WLGT++TA+DAA AYDRAAF MRG +A LNFPH
Subjt:  LQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPH

AT4G17500.1 ethylene responsive element binding factor 14.1e-2356.99Show/hide
Query:  ARGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTSNNDYPRRSCKRSSPNCNSPRTPP
        A+G  +RGVR+RPWGK+AAEIRDP++ GAR+WLGT+ TA+DAALAYDRAAF+MRG++A LNFP +  ++   D  R   KRSS + ++    P
Subjt:  ARGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTSNNDYPRRSCKRSSPNCNSPRTPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGCGGGTAGAGATGATGGGGATACAGAGTGTGGTTCCAGTAAGCTAAGGCAGAAGAGAATTAGAAGCAGAAAAATGTGGAGTAACAGCAACAGCAGTAGCTTGGA
AGGGTCGTCGGATTTGTTTGTGTTGGAGCGGATTCGGCGGCATCTTCTGGAAGACGAATTAGGGAATAATGTTGATGAGGAGGGAAGGTGGGAGTGGGGGAATAATAGTA
CTGGAGGAGGTTCGAAGAGTAATGATAATAATAATAATATGGTCATGGTAGAACTGGGCGAAGAGATGAGAGGGAAGTCAGGGAAGGGATCAAGTATTATATGGTCGTCA
GATGATCAGAGGGATCAAATCAGGGCGAGGGGTTTACAGTTCAGAGGAGTTAGGAGGAGGCCGTGGGGGAAGTACGCGGCAGAAATCAGAGACCCGAGCAGAAAAGGGGC
TCGAATATGGCTTGGGACTTACCACACCGCCCAAGATGCGGCTTTAGCTTACGATCGAGCTGCTTTCCAGATGCGAGGGGCCAAAGCCAAGCTCAACTTCCCTCACATGA
TTGCTTCCACTTCCAACAACGACTACCCACGTCGTAGCTGTAAGCGTAGTTCGCCTAATTGTAATTCCCCCCGGACCCCTCCGCCCCTATTCAACTTCAACAACTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGCGGGTAGAGATGATGGGGATACAGAGTGTGGTTCCAGTAAGCTAAGGCAGAAGAGAATTAGAAGCAGAAAAATGTGGAGTAACAGCAACAGCAGTAGCTTGGA
AGGGTCGTCGGATTTGTTTGTGTTGGAGCGGATTCGGCGGCATCTTCTGGAAGACGAATTAGGGAATAATGTTGATGAGGAGGGAAGGTGGGAGTGGGGGAATAATAGTA
CTGGAGGAGGTTCGAAGAGTAATGATAATAATAATAATATGGTCATGGTAGAACTGGGCGAAGAGATGAGAGGGAAGTCAGGGAAGGGATCAAGTATTATATGGTCGTCA
GATGATCAGAGGGATCAAATCAGGGCGAGGGGTTTACAGTTCAGAGGAGTTAGGAGGAGGCCGTGGGGGAAGTACGCGGCAGAAATCAGAGACCCGAGCAGAAAAGGGGC
TCGAATATGGCTTGGGACTTACCACACCGCCCAAGATGCGGCTTTAGCTTACGATCGAGCTGCTTTCCAGATGCGAGGGGCCAAAGCCAAGCTCAACTTCCCTCACATGA
TTGCTTCCACTTCCAACAACGACTACCCACGTCGTAGCTGTAAGCGTAGTTCGCCTAATTGTAATTCCCCCCGGACCCCTCCGCCCCTATTCAACTTCAACAACTACTGA
Protein sequenceShow/hide protein sequence
MSAGRDDGDTECGSSKLRQKRIRSRKMWSNSNSSSLEGSSDLFVLERIRRHLLEDELGNNVDEEGRWEWGNNSTGGGSKSNDNNNNMVMVELGEEMRGKSGKGSSIIWSS
DDQRDQIRARGLQFRGVRRRPWGKYAAEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTSNNDYPRRSCKRSSPNCNSPRTPPPLFNFNNY