CuGenDBv2

Gene ID	Lsi06G000040
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Eukaryotic peptide chain release factor subunit 1-1
Genome location	chr06:31286..32379
RNA-Seq Expression	Lsi06G000040
Synteny	Lsi06G000040
Gene Ontology terms	GO:0006415 - translational termination (biological process) GO:0005737 - cytoplasm (cellular component) GO:0003747 - translation release factor activity (molecular function)
InterPro domains	IPR004403 - Peptide chain release factor eRF1/aRF1 IPR005141 - eRF1 domain 2 IPR024049 - eRF1, domain 1 IPR029064 - 50S ribosomal protein L30e-like IPR042226 - eRF1, domain 2 superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

CBI19672.3 unnamed protein product, partial [Vitis vinifera]

6.1e-99

61.71

Show/hide

Query:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID
        MLGDEFGT SNIKSRVNRQ VLG ITSAQQRLKLYNK                                INASLYL +NKFHTEALNELLESDDKFGFI 
Subjt:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID

Query:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA
        MDGNGTLFGTLSGNTREVLHKF+V+LPKKHGRGGQ ALRFARLRMEKRH+YVRKT +LATQFFINP TSQPNVAGLIL GS DFKTELSQSDMFDPRLQA
Subjt:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA

Query:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------
        KILNVVDVSYGGENGFNQAI+LSSEILSN                                                                       
Subjt:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------

Query:  -----------EGSQFCKGFGGIGGILRYQLDIRSFDELS-DGEEYDDSE
                   EGSQFC+GFGGIGGILRYQLD+RSFDELS DGE YDDSE
Subjt:  -----------EGSQFCKGFGGIGGILRYQLDIRSFDELS-DGEEYDDSE

CDP05419.1 unnamed protein product [Coffea canephora]

6.8e-98

61.21

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Query:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID
        MLGDEFGT SNIKSRVNRQ VL  ITSAQQRLKLYNK                                INASLYL +NKFHTEALNELLESDDKFGFI 
Subjt:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID

Query:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA
        MDGNGTLFGTLSGNTREVLHKFSV+LPKKHGRGGQ ALRFARLRMEKRH+YVRKT +LATQF+INP+TSQPNV+GLIL GS DFKTELSQSDMFDPRLQA
Subjt:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA

Query:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------
        KILNVVDVSYGGENGFNQAI+LSSEILSN                                                                       
Subjt:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------

Query:  ---------EGSQFCKGFGGIGGILRYQLDIRSFDELSD-GEEYDDSE
                 EGSQFC+GFGGIGGILRYQLD+R+FDELSD GE YDDSE
Subjt:  ---------EGSQFCKGFGGIGGILRYQLDIRSFDELSD-GEEYDDSE

XP_004140563.1 eukaryotic peptide chain release factor subunit 1-3 [Cucumis sativus]

3.4e-97

56.59

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Query:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID
        MLGDEFGT SNIKSRVNRQ VLG ITSAQQRLKLYNK                                INASLYL +NKFHTEALNELLESDDKFGFI 
Subjt:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID

Query:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA
        MDGNGTLFGTLSGNTREVLHKFSV+LPKKHGRGGQ ALRFARLRMEKRH+YVRKT +LATQFFINP TSQPNVAGLIL GS DFKTELSQSDMFDPRLQA
Subjt:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA

Query:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------
        KILNVVDVSYGGENGFNQAI+LSSEILSN                                                                       
Subjt:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------

Query:  -------------------------------------------------EGSQFCKGFGGIGGILRYQLDIRSFDELSDGEEYDDSE
                                                         EGSQFC+GFGGIGGILRYQLDIRSFDELSDGEEYDDSE
Subjt:  -------------------------------------------------EGSQFCKGFGGIGGILRYQLDIRSFDELSDGEEYDDSE

XP_004142086.1 eukaryotic peptide chain release factor subunit 1-3 [Cucumis sativus]

3.4e-97

56.59

Show/hide

Query:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID
        MLGDEFGT SNIKSRVNRQ VLG ITSAQQRLKLYNK                                INASLYL +NKFHTEALNELLESDDKFGFI 
Subjt:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID

Query:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA
        MDGNGTLFGTLSGNTREVLHKFSV+LPKKHGRGGQ ALRFARLRMEKRH+YVRKT +LATQFFINP TSQPNVAGLIL GS DFKTELSQSDMFDPRLQA
Subjt:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA

Query:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------
        KILNVVDVSYGGENGFNQAI+LSSEILSN                                                                       
Subjt:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------

Query:  -------------------------------------------------EGSQFCKGFGGIGGILRYQLDIRSFDELSDGEEYDDSE
                                                         EGSQFC+GFGGIGGILRYQLDIRSFDELSDGEEYDDSE
Subjt:  -------------------------------------------------EGSQFCKGFGGIGGILRYQLDIRSFDELSDGEEYDDSE

XP_008447536.1 PREDICTED: eukaryotic peptide chain release factor subunit 1-3 [Cucumis melo]

3.4e-97

56.59

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Query:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID
        MLGDEFGT SNIKSRVNRQ VLG ITSAQQRLKLYNK                                INASLYL +NKFHTEALNELLESDDKFGFI 
Subjt:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID

Query:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA
        MDGNGTLFGTLSGNTREVLHKFSV+LPKKHGRGGQ ALRFARLRMEKRH+YVRKT +LATQFFINP TSQPNVAGLIL GS DFKTELSQSDMFDPRLQA
Subjt:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA

Query:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------
        KILNVVDVSYGGENGFNQAI+LSSEILSN                                                                       
Subjt:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------

Query:  -------------------------------------------------EGSQFCKGFGGIGGILRYQLDIRSFDELSDGEEYDDSE
                                                         EGSQFC+GFGGIGGILRYQLDIRSFDELSDGEEYDDSE
Subjt:  -------------------------------------------------EGSQFCKGFGGIGGILRYQLDIRSFDELSDGEEYDDSE

TrEMBL top hits

e value

%identity

Alignment

A0A068UB37 eRF1_1 domain-containing protein

3.3e-98

61.21

Show/hide

Query:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID
        MLGDEFGT SNIKSRVNRQ VL  ITSAQQRLKLYNK                                INASLYL +NKFHTEALNELLESDDKFGFI 
Subjt:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID

Query:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA
        MDGNGTLFGTLSGNTREVLHKFSV+LPKKHGRGGQ ALRFARLRMEKRH+YVRKT +LATQF+INP+TSQPNV+GLIL GS DFKTELSQSDMFDPRLQA
Subjt:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA

Query:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------
        KILNVVDVSYGGENGFNQAI+LSSEILSN                                                                       
Subjt:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------

Query:  ---------EGSQFCKGFGGIGGILRYQLDIRSFDELSD-GEEYDDSE
                 EGSQFC+GFGGIGGILRYQLD+R+FDELSD GE YDDSE
Subjt:  ---------EGSQFCKGFGGIGGILRYQLDIRSFDELSD-GEEYDDSE

A0A151SFA2 Eukaryotic peptide chain release factor subunit 1-3

1.6e-97

60.86

Show/hide

Query:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID
        MLGDEFGT SNIKSRVNRQ VLG ITSAQQRLKLYNK                                INASLYL +NKFHTEALNELLESDDKFGFI 
Subjt:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID

Query:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA
        MDGNGTLFGTLSGNTREVLHKF+V+LPKKHGRGGQ ALRFARLRMEKRH+YVRKT +LATQFFINP TSQPNV+GLIL GS DFKTELSQSDMFDPRLQA
Subjt:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA

Query:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------
        KILNVVDVSYGGENGFNQAI+LS+EILSN                                                                       
Subjt:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------

Query:  -----------EGSQFCKGFGGIGGILRYQLDIRSFDELS-DGEEYDDSE
                   EGSQFC+GFGGIGGILRYQLDIRSFDELS DGE Y DS+
Subjt:  -----------EGSQFCKGFGGIGGILRYQLDIRSFDELS-DGEEYDDSE

A0A1S3BHN0 eukaryotic peptide chain release factor subunit 1-3

1.6e-97

56.59

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Query:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID
        MLGDEFGT SNIKSRVNRQ VLG ITSAQQRLKLYNK                                INASLYL +NKFHTEALNELLESDDKFGFI 
Subjt:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID

Query:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA
        MDGNGTLFGTLSGNTREVLHKFSV+LPKKHGRGGQ ALRFARLRMEKRH+YVRKT +LATQFFINP TSQPNVAGLIL GS DFKTELSQSDMFDPRLQA
Subjt:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA

Query:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------
        KILNVVDVSYGGENGFNQAI+LSSEILSN                                                                       
Subjt:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------

Query:  -------------------------------------------------EGSQFCKGFGGIGGILRYQLDIRSFDELSDGEEYDDSE
                                                         EGSQFC+GFGGIGGILRYQLDIRSFDELSDGEEYDDSE
Subjt:  -------------------------------------------------EGSQFCKGFGGIGGILRYQLDIRSFDELSDGEEYDDSE

A0A1S3CBS7 eukaryotic peptide chain release factor subunit 1-3-like

1.6e-97

56.59

Show/hide

Query:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID
        MLGDEFGT SNIKSRVNRQ VLG ITSAQQRLKLYNK                                INASLYL +NKFHTEALNELLESDDKFGFI 
Subjt:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID

Query:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA
        MDGNGTLFGTLSGNTREVLHKFSV+LPKKHGRGGQ ALRFARLRMEKRH+YVRKT +LATQFFINP TSQPNVAGLIL GS DFKTELSQSDMFDPRLQA
Subjt:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA

Query:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------
        KILNVVDVSYGGENGFNQAI+LSSEILSN                                                                       
Subjt:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------

Query:  -------------------------------------------------EGSQFCKGFGGIGGILRYQLDIRSFDELSDGEEYDDSE
                                                         EGSQFC+GFGGIGGILRYQLDIRSFDELSDGEEYDDSE
Subjt:  -------------------------------------------------EGSQFCKGFGGIGGILRYQLDIRSFDELSDGEEYDDSE

A0A5A7T9D0 Eukaryotic peptide chain release factor subunit 1-3

1.6e-97

56.59

Show/hide

Query:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID
        MLGDEFGT SNIKSRVNRQ VLG ITSAQQRLKLYNK                                INASLYL +NKFHTEALNELLESDDKFGFI 
Subjt:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID

Query:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA
        MDGNGTLFGTLSGNTREVLHKFSV+LPKKHGRGGQ ALRFARLRMEKRH+YVRKT +LATQFFINP TSQPNVAGLIL GS DFKTELSQSDMFDPRLQA
Subjt:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA

Query:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------
        KILNVVDVSYGGENGFNQAI+LSSEILSN                                                                       
Subjt:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------

Query:  -------------------------------------------------EGSQFCKGFGGIGGILRYQLDIRSFDELSDGEEYDDSE
                                                         EGSQFC+GFGGIGGILRYQLDIRSFDELSDGEEYDDSE
Subjt:  -------------------------------------------------EGSQFCKGFGGIGGILRYQLDIRSFDELSDGEEYDDSE

SwissProt top hits

e value

%identity

Alignment

D2K759 Eukaryotic peptide chain release factor subunit 1-2

1.1e-93

52.97

Show/hide

Query:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID
        MLGDE+GT SNIKSRVNRQ VL  ITSAQQRLKLYNK                                INASLYL +NKFHT ALNELLESDDKFGFI 
Subjt:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID

Query:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA
        MDGNGTLFGTLSGNTREVLHKF+V+LPKKHGRGGQ ALRFARLRMEKRH+YVRKT +LATQF+INP TSQPNVAGLIL GS DFKTELSQS++FDPRLQA
Subjt:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA

Query:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------
        KILNVVDVSYGGENGFNQAI+LS+EILSN                                                                       
Subjt:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------

Query:  -------------------------------------------------EGSQFCKGFGGIGGILRYQLDIRSFDELSDGEEYDDSE
                                                         EGSQFC+GFGGIGG+LRYQLD+R+FDELSDGE Y+DS+
Subjt:  -------------------------------------------------EGSQFCKGFGGIGGILRYQLDIRSFDELSDGEEYDDSE

D2K760 Eukaryotic peptide chain release factor subunit 1-3

5.2e-93

52.45

Show/hide

Query:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID
        ML DE+GT SNIKSRVNRQ VL  ITSAQQRLKLYNK                                INASLYL +NKFHTE LNELLESDDKFGFI 
Subjt:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID

Query:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA
        MDGNGTLFGTLSGNTREVLHKF+V+LPKKHGRGGQ ALRFARLRMEKRH+YVRKT +LATQF+INP TSQPNV+GLIL GS DFKTELSQS++FDPRLQA
Subjt:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA

Query:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------
        KILNVVDVSYGGENGFNQAI+LS+EILSN                                                                       
Subjt:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------

Query:  -------------------------------------------------EGSQFCKGFGGIGGILRYQLDIRSFDELSDGEEYDDSE
                                                         EGSQFC+GFGGIGG+LRYQLD+R+FDELSDGE Y+DS+
Subjt:  -------------------------------------------------EGSQFCKGFGGIGGILRYQLDIRSFDELSDGEEYDDSE

P35614 Eukaryotic peptide chain release factor subunit 1-3

5.2e-93

52.45

Show/hide

Query:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID
        ML DE+GT SNIKSRVNRQ VL  ITSAQQRLKLYNK                                INASLYL +NKFHTE LNELLESDDKFGFI 
Subjt:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID

Query:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA
        MDGNGTLFGTLSGNTREVLHKF+V+LPKKHGRGGQ ALRFARLRMEKRH+YVRKT +LATQF+INP TSQPNV+GLIL GS DFKTELSQS++FDPRLQA
Subjt:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA

Query:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------
        KILNVVDVSYGGENGFNQAI+LS+EILSN                                                                       
Subjt:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------

Query:  -------------------------------------------------EGSQFCKGFGGIGGILRYQLDIRSFDELSDGEEYDDSE
                                                         EGSQFC+GFGGIGG+LRYQLD+R+FDELSDGE Y+DS+
Subjt:  -------------------------------------------------EGSQFCKGFGGIGGILRYQLDIRSFDELSDGEEYDDSE

Q39097 Eukaryotic peptide chain release factor subunit 1-1

4.1e-90

52.21

Show/hide

Query:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID
        MLGDE+GT SNIKSRVNRQ VLG ITSAQQRLKLYN+                                INASLYL +NKFHTEALNELLESDDKFGFI 
Subjt:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID

Query:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA
        MDGNGTLFGTLSGNTREVLHKFSV+LPKKHGRGGQ ALRFARLRMEKRH+YVRKT +LATQ++INP TSQPNV+GLIL GS DFKTELSQSDMFDPRL A
Subjt:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA

Query:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------
        KILNVVDVSYGGENGFNQAI+LS+EIL+N                                                                       
Subjt:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------

Query:  -------------------------------------------------EGSQFCKGFGGIGGILRYQLDIRSFDELSDGEEYDD
                                                         EGSQFC+GFGGIGGILRYQLD+ +FD   DGE  DD
Subjt:  -------------------------------------------------EGSQFCKGFGGIGGILRYQLDIRSFDELSDGEEYDD

Q9LPV8 Eukaryotic peptide chain release factor subunit 1-2

3.1e-93

52.71

Show/hide

Query:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID
        MLGDE+GT SNIKSRVNRQ VL  ITSAQQRLKLYNK                                INASLYL +NKFHTEALNELLESDDKFGFI 
Subjt:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID

Query:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA
        MDGNGTLFGTLSGNTREVLHKF+V+LPKKHGRGGQ ALRFARLRMEKRH+YVRKT +LATQF+INP TSQPNV+GLIL GS DFKTELSQS++FDPRLQA
Subjt:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA

Query:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------
        KILNVVDVSYGGENGFNQAI+LS+EILSN                                                                       
Subjt:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------

Query:  -------------------------------------------------EGSQFCKGFGGIGGILRYQLDIRSFDELSDGEEYDDSE
                                                         EGSQFC+GFGGIGG+LRYQLD+R+FDELSD E Y+DS+
Subjt:  -------------------------------------------------EGSQFCKGFGGIGGILRYQLDIRSFDELSDGEEYDDSE

Arabidopsis top hits

e value

%identity

Alignment

AT1G12920.1 eukaryotic release factor 1-2

2.2e-94

52.71

Show/hide

Query:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID
        MLGDE+GT SNIKSRVNRQ VL  ITSAQQRLKLYNK                                INASLYL +NKFHTEALNELLESDDKFGFI 
Subjt:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID

Query:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA
        MDGNGTLFGTLSGNTREVLHKF+V+LPKKHGRGGQ ALRFARLRMEKRH+YVRKT +LATQF+INP TSQPNV+GLIL GS DFKTELSQS++FDPRLQA
Subjt:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA

Query:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------
        KILNVVDVSYGGENGFNQAI+LS+EILSN                                                                       
Subjt:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------

Query:  -------------------------------------------------EGSQFCKGFGGIGGILRYQLDIRSFDELSDGEEYDDSE
                                                         EGSQFC+GFGGIGG+LRYQLD+R+FDELSD E Y+DS+
Subjt:  -------------------------------------------------EGSQFCKGFGGIGGILRYQLDIRSFDELSDGEEYDDSE

AT3G26618.1 eukaryotic release factor 1-3

3.7e-94

52.45

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Query:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID
        ML DE+GT SNIKSRVNRQ VL  ITSAQQRLKLYNK                                INASLYL +NKFHTE LNELLESDDKFGFI 
Subjt:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID

Query:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA
        MDGNGTLFGTLSGNTREVLHKF+V+LPKKHGRGGQ ALRFARLRMEKRH+YVRKT +LATQF+INP TSQPNV+GLIL GS DFKTELSQS++FDPRLQA
Subjt:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA

Query:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------
        KILNVVDVSYGGENGFNQAI+LS+EILSN                                                                       
Subjt:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------

Query:  -------------------------------------------------EGSQFCKGFGGIGGILRYQLDIRSFDELSDGEEYDDSE
                                                         EGSQFC+GFGGIGG+LRYQLD+R+FDELSDGE Y+DS+
Subjt:  -------------------------------------------------EGSQFCKGFGGIGGILRYQLDIRSFDELSDGEEYDDSE

AT5G47880.1 eukaryotic release factor 1-1

2.9e-91

52.21

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Query:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID
        MLGDE+GT SNIKSRVNRQ VLG ITSAQQRLKLYN+                                INASLYL +NKFHTEALNELLESDDKFGFI 
Subjt:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID

Query:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA
        MDGNGTLFGTLSGNTREVLHKFSV+LPKKHGRGGQ ALRFARLRMEKRH+YVRKT +LATQ++INP TSQPNV+GLIL GS DFKTELSQSDMFDPRL A
Subjt:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA

Query:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------
        KILNVVDVSYGGENGFNQAI+LS+EIL+N                                                                       
Subjt:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------

Query:  -------------------------------------------------EGSQFCKGFGGIGGILRYQLDIRSFDELSDGEEYDD
                                                         EGSQFC+GFGGIGGILRYQLD+ +FD   DGE  DD
Subjt:  -------------------------------------------------EGSQFCKGFGGIGGILRYQLDIRSFDELSDGEEYDD

AT5G47880.2 eukaryotic release factor 1-1

2.9e-91

52.21

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Query:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID
        MLGDE+GT SNIKSRVNRQ VLG ITSAQQRLKLYN+                                INASLYL +NKFHTEALNELLESDDKFGFI 
Subjt:  MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKA-------------------------------INASLYLNNNKFHTEALNELLESDDKFGFID

Query:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA
        MDGNGTLFGTLSGNTREVLHKFSV+LPKKHGRGGQ ALRFARLRMEKRH+YVRKT +LATQ++INP TSQPNV+GLIL GS DFKTELSQSDMFDPRL A
Subjt:  MDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFARLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQA

Query:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------
        KILNVVDVSYGGENGFNQAI+LS+EIL+N                                                                       
Subjt:  KILNVVDVSYGGENGFNQAIQLSSEILSN-----------------------------------------------------------------------

Query:  -------------------------------------------------EGSQFCKGFGGIGGILRYQLDIRSFDELSDGEEYDD
                                                         EGSQFC+GFGGIGGILRYQLD+ +FD   DGE  DD
Subjt:  -------------------------------------------------EGSQFCKGFGGIGGILRYQLDIRSFDELSDGEEYDD

Sequences

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CDS sequence

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ATGCTTGGTGATGAATTTGGAACTACTTCGAACATTAAGAGCAGGGTAAATCGTCAATATGTTTTGGGCACTATCACATCTGCTCAGCAGAGGCTCAAGCTATATAACAA
GGCTATAAATGCATCTCTTTATCTCAACAACAACAAGTTCCACACGGAAGCCCTAAATGAACTGTTAGAATCTGATGACAAATTTGGCTTCATTGACATGGATGGTAATG
GAACACTCTTTGGCACATTGAGTGGTAACACACGTGAAGTCCTGCACAAATTTAGTGTCAACCTTCCTAAGAAACATGGAAGAGGTGGTCAGTTAGCACTTCGGTTTGCT
CGTCTTCGAATGGAGAAGCGACACAGTTATGTGAGGAAAACAACAAAGCTTGCAACCCAGTTCTTTATTAATCCTACCACTAGTCAACCTAATGTTGCAGGTTTGATACT
GGTTGGATCAACTGACTTCAAAACGGAGCTCAGTCAATCCGACATGTTCGATCCTCGTCTCCAGGCCAAAATACTTAATGTTGTCGATGTCTCTTATGGAGGGGAAAATG
GATTCAATCAGGCTATTCAATTGTCATCCGAGATCTTGTCTAATGAAGGATCACAGTTCTGCAAAGGTTTTGGTGGTATTGGAGGAATTCTTCGTTACCAGCTTGACATA
AGATCGTTTGATGAACTATCTGATGGGGAAGAGTACGATGATTCTGAATAG

mRNA sequence

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Protein sequence

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MLGDEFGTTSNIKSRVNRQYVLGTITSAQQRLKLYNKAINASLYLNNNKFHTEALNELLESDDKFGFIDMDGNGTLFGTLSGNTREVLHKFSVNLPKKHGRGGQLALRFA
RLRMEKRHSYVRKTTKLATQFFINPTTSQPNVAGLILVGSTDFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIQLSSEILSNEGSQFCKGFGGIGGILRYQLDI
RSFDELSDGEEYDDSE

Lsi06G000040 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome