; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G000050 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G000050
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionsister-chromatid cohesion protein 3 isoform X2
Genome locationchr06:36723..52173
RNA-Seq ExpressionLsi06G000050
SyntenyLsi06G000050
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR039662 - Cohesin subunit Scc3/SA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050970.1 sister-chromatid cohesion protein 3 isoform X2 [Cucumis melo var. makuwa]8.0e-14082.82Show/hide
Query:  NESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYPKEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVI
        +E EDE  SKEYVEETNK+AIMIA +KLVASDTVS                         KEYLGP IISHFLIHGTSVADIVKHFIA+L+KKD NIP+I
Subjt:  NESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYPKEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVI

Query:  FLEAMKRAYHRHTVELLRNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECAVLHFVSKLPTPDILEIIKDV
        FLEAMKRAYHRHTVEL RNSDGPST KSFLECRELAARLSGTYVGAARNKHR DILKIVKDG+E+AFSDAP NLSFLEC +LHFVSKL TPDILEIIK V
Subjt:  FLEAMKRAYHRHTVELLRNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECAVLHFVSKLPTPDILEIIKDV

Query:  QNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESISASDHEDIHDEEKRDEEDEEEVPLI
        QNRT NINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKH IQGKRLFDEQSTSE+EESISASDHED+HDEEK+DEED EEVPLI
Subjt:  QNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESISASDHEDIHDEEKRDEEDEEEVPLI

Query:  HSIRPSSKLRSLRISRDEKKGSSTGK
        HSIR SSKLRSLRISR+EKKG+STGK
Subjt:  HSIRPSSKLRSLRISRDEKKGSSTGK

TYK10316.1 sister-chromatid cohesion protein 3 isoform X2 [Cucumis melo var. makuwa]8.0e-14082.82Show/hide
Query:  NESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYPKEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVI
        +E EDE  SKEYVEETNK+AIMIA +KLVASDTVS                         KEYLGP IISHFLIHGTSVADIVKHFIA+L+KKD NIP+I
Subjt:  NESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYPKEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVI

Query:  FLEAMKRAYHRHTVELLRNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECAVLHFVSKLPTPDILEIIKDV
        FLEAMKRAYHRHTVEL RNSDGPST KSFLECRELAARLSGTYVGAARNKHR DILKIVKDG+E+AFSDAP NLSFLEC +LHFVSKL TPDILEIIK V
Subjt:  FLEAMKRAYHRHTVELLRNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECAVLHFVSKLPTPDILEIIKDV

Query:  QNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESISASDHEDIHDEEKRDEEDEEEVPLI
        QNRT NINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKH IQGKRLFDEQSTSE+EESISASDHED+HDEEK+DEED EEVPLI
Subjt:  QNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESISASDHEDIHDEEKRDEEDEEEVPLI

Query:  HSIRPSSKLRSLRISRDEKKGSSTGK
        HSIR SSKLRSLRISR+EKKG+STGK
Subjt:  HSIRPSSKLRSLRISRDEKKGSSTGK

XP_008450503.1 PREDICTED: sister-chromatid cohesion protein 3 isoform X2 [Cucumis melo]9.4e-14183.13Show/hide
Query:  NESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYPKEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVI
        +E EDE  SKEYVEETNK+AIMIA +KLVASDTVS                         KEYLGP IISHFLIHGTSVADIVKHFIA+L+KKD NIP+I
Subjt:  NESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYPKEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVI

Query:  FLEAMKRAYHRHTVELLRNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECAVLHFVSKLPTPDILEIIKDV
        FLEAMKRAYHRHTVEL RNSDGPST KSFLECRELAARLSGTYVGAARNKHR DILKIVKDG+E+AFSDAP NLSFLEC +LHFVSKL TPDILEIIKDV
Subjt:  FLEAMKRAYHRHTVELLRNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECAVLHFVSKLPTPDILEIIKDV

Query:  QNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESISASDHEDIHDEEKRDEEDEEEVPLI
        QNRT NINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKH IQGKRLFDEQSTSE+EESISASDHED+HDEEK+DEED EEVPLI
Subjt:  QNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESISASDHEDIHDEEKRDEEDEEEVPLI

Query:  HSIRPSSKLRSLRISRDEKKGSSTGK
        HSIR SSKLRSLRISR+EKKG+STGK
Subjt:  HSIRPSSKLRSLRISRDEKKGSSTGK

XP_011659512.1 sister-chromatid cohesion protein 3 [Cucumis sativus]1.1e-14183.13Show/hide
Query:  NESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYPKEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVI
        +E EDE  SKEYVEETNK+AIMIA +KLVASDTVS                         KEYLGP IISHFLIHGTSVADIVKHFIA+L+KKD NIP I
Subjt:  NESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYPKEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVI

Query:  FLEAMKRAYHRHTVELLRNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECAVLHFVSKLPTPDILEIIKDV
        FLEAMKRAYHRHTVEL  NSDGPSTGKSFLECRELAARLSGTYVGAARNKHR DILKIVKDG+E+AFSD P NLSFLECA+LHFVSKL TPDILEIIKDV
Subjt:  FLEAMKRAYHRHTVELLRNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECAVLHFVSKLPTPDILEIIKDV

Query:  QNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESISASDHEDIHDEEKRDEEDEEEVPLI
        QNRT NINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKH +QGKRLFDEQSTSE+EESISASDHED+HDEEK+DEEDEEEVPLI
Subjt:  QNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESISASDHEDIHDEEKRDEEDEEEVPLI

Query:  HSIRPSSKLRSLRISRDEKKGSSTGK
        HSIR SSKLRSLRISR+EKKG+STGK
Subjt:  HSIRPSSKLRSLRISRDEKKGSSTGK

XP_038879338.1 sister-chromatid cohesion protein 3 [Benincasa hispida]9.4e-14987.12Show/hide
Query:  NESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYPKEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVI
        +E EDEDVSKEYVEETNK+AIMIA AKLVASDTVS                         KEYLGP IISHFL+HGTSVADIVKHFIAIL+KKDGNIPVI
Subjt:  NESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYPKEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVI

Query:  FLEAMKRAYHRHTVELLRNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECAVLHFVSKLPTPDILEIIKDV
        FLEAMKRAY RH VELLRNSDGPSTGKSFLECRELAARLSGTYVGAARNKHR DILKIVKDG+E+AFSDAP NLSFLECAVLHFVSKLPTPDILEIIKDV
Subjt:  FLEAMKRAYHRHTVELLRNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECAVLHFVSKLPTPDILEIIKDV

Query:  QNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESISASDHEDIHDEEKRDEEDEEEVPLI
        QNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESISASDHED HDEEKRDEEDEEEVPLI
Subjt:  QNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESISASDHEDIHDEEKRDEEDEEEVPLI

Query:  HSIRPSSKLRSLRISRDEKKGSSTGK
        HSIRPSSKLRSLRISRDE+KG+S GK
Subjt:  HSIRPSSKLRSLRISRDEKKGSSTGK

TrEMBL top hitse value%identityAlignment
A0A0A0M1E7 Uncharacterized protein7.3e-13989.72Show/hide
Query:  MIITGVGVLEPCNIYPKEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVIFLEAMKRAYHRHTVELLRNSDGPSTGKSFLECRELAARLSGTYV
        +II GVG  EPCN+YP+EYLGP IISHFLIHGTSVADIVKHFIA+L+KKD NIP IFLEAMKRAYHRHTVEL  NSDGPSTGKSFLECRELAARLSGTYV
Subjt:  MIITGVGVLEPCNIYPKEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVIFLEAMKRAYHRHTVELLRNSDGPSTGKSFLECRELAARLSGTYV

Query:  GAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECAVLHFVSKLPTPDILEIIKDVQNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNS
        GAARNKHR DILKIVKDG+E+AFSD P NLSFLECA+LHFVSKL TPDILEIIKDVQNRT NINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNS
Subjt:  GAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECAVLHFVSKLPTPDILEIIKDVQNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNS

Query:  TRRRGRPRKKHTIQGKRLFDEQSTSEDEESISASDHEDIHDEEKRDEEDEEEVPLIHSIRPSSKLRSLRISRDEKKGSSTGK
        TRRRGRPRKKH +QGKRLFDEQSTSE+EESISASDHED+HDEEK+DEEDEEEVPLIHSIR SSKLRSLRISR+EKKG+STGK
Subjt:  TRRRGRPRKKHTIQGKRLFDEQSTSEDEESISASDHEDIHDEEKRDEEDEEEVPLIHSIRPSSKLRSLRISRDEKKGSSTGK

A0A1S3BQ10 sister-chromatid cohesion protein 3 isoform X24.6e-14183.13Show/hide
Query:  NESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYPKEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVI
        +E EDE  SKEYVEETNK+AIMIA +KLVASDTVS                         KEYLGP IISHFLIHGTSVADIVKHFIA+L+KKD NIP+I
Subjt:  NESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYPKEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVI

Query:  FLEAMKRAYHRHTVELLRNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECAVLHFVSKLPTPDILEIIKDV
        FLEAMKRAYHRHTVEL RNSDGPST KSFLECRELAARLSGTYVGAARNKHR DILKIVKDG+E+AFSDAP NLSFLEC +LHFVSKL TPDILEIIKDV
Subjt:  FLEAMKRAYHRHTVELLRNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECAVLHFVSKLPTPDILEIIKDV

Query:  QNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESISASDHEDIHDEEKRDEEDEEEVPLI
        QNRT NINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKH IQGKRLFDEQSTSE+EESISASDHED+HDEEK+DEED EEVPLI
Subjt:  QNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESISASDHEDIHDEEKRDEEDEEEVPLI

Query:  HSIRPSSKLRSLRISRDEKKGSSTGK
        HSIR SSKLRSLRISR+EKKG+STGK
Subjt:  HSIRPSSKLRSLRISRDEKKGSSTGK

A0A1S4DYB8 sister-chromatid cohesion protein 3 isoform X11.6e-13880.42Show/hide
Query:  NESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYPKEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVI
        +E EDE  SKEYVEETNK+AIMIA +KLVASDTVS                         KEYLGP IISHFLIHGTSVADIVKHFIA+L+KKD NIP+I
Subjt:  NESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYPKEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVI

Query:  FLEAMKR-----------AYHRHTVELLRNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECAVLHFVSKLP
        FLEAMKR           AYHRHTVEL RNSDGPST KSFLECRELAARLSGTYVGAARNKHR DILKIVKDG+E+AFSDAP NLSFLEC +LHFVSKL 
Subjt:  FLEAMKR-----------AYHRHTVELLRNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECAVLHFVSKLP

Query:  TPDILEIIKDVQNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESISASDHEDIHDEEKR
        TPDILEIIKDVQNRT NINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKH IQGKRLFDEQSTSE+EESISASDHED+HDEEK+
Subjt:  TPDILEIIKDVQNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESISASDHEDIHDEEKR

Query:  DEEDEEEVPLIHSIRPSSKLRSLRISRDEKKGSSTGK
        DEED EEVPLIHSIR SSKLRSLRISR+EKKG+STGK
Subjt:  DEEDEEEVPLIHSIRPSSKLRSLRISRDEKKGSSTGK

A0A5A7U700 Sister-chromatid cohesion protein 3 isoform X23.9e-14082.82Show/hide
Query:  NESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYPKEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVI
        +E EDE  SKEYVEETNK+AIMIA +KLVASDTVS                         KEYLGP IISHFLIHGTSVADIVKHFIA+L+KKD NIP+I
Subjt:  NESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYPKEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVI

Query:  FLEAMKRAYHRHTVELLRNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECAVLHFVSKLPTPDILEIIKDV
        FLEAMKRAYHRHTVEL RNSDGPST KSFLECRELAARLSGTYVGAARNKHR DILKIVKDG+E+AFSDAP NLSFLEC +LHFVSKL TPDILEIIK V
Subjt:  FLEAMKRAYHRHTVELLRNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECAVLHFVSKLPTPDILEIIKDV

Query:  QNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESISASDHEDIHDEEKRDEEDEEEVPLI
        QNRT NINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKH IQGKRLFDEQSTSE+EESISASDHED+HDEEK+DEED EEVPLI
Subjt:  QNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESISASDHEDIHDEEKRDEEDEEEVPLI

Query:  HSIRPSSKLRSLRISRDEKKGSSTGK
        HSIR SSKLRSLRISR+EKKG+STGK
Subjt:  HSIRPSSKLRSLRISRDEKKGSSTGK

A0A5D3CIX2 Sister-chromatid cohesion protein 3 isoform X23.9e-14082.82Show/hide
Query:  NESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYPKEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVI
        +E EDE  SKEYVEETNK+AIMIA +KLVASDTVS                         KEYLGP IISHFLIHGTSVADIVKHFIA+L+KKD NIP+I
Subjt:  NESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYPKEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVI

Query:  FLEAMKRAYHRHTVELLRNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECAVLHFVSKLPTPDILEIIKDV
        FLEAMKRAYHRHTVEL RNSDGPST KSFLECRELAARLSGTYVGAARNKHR DILKIVKDG+E+AFSDAP NLSFLEC +LHFVSKL TPDILEIIK V
Subjt:  FLEAMKRAYHRHTVELLRNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECAVLHFVSKLPTPDILEIIKDV

Query:  QNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESISASDHEDIHDEEKRDEEDEEEVPLI
        QNRT NINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKH IQGKRLFDEQSTSE+EESISASDHED+HDEEK+DEED EEVPLI
Subjt:  QNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESISASDHEDIHDEEKRDEEDEEEVPLI

Query:  HSIRPSSKLRSLRISRDEKKGSSTGK
        HSIR SSKLRSLRISR+EKKG+STGK
Subjt:  HSIRPSSKLRSLRISRDEKKGSSTGK

SwissProt top hitse value%identityAlignment
O82265 Sister-chromatid cohesion protein 32.8e-7147.96Show/hide
Query:  NESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYPKEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVI
        +E+++ED +KEY+EETN++  +IA  KLVASD V                         PK+YLGPEIISH  +HG  V  I+K+ I  LRKK+ +I  I
Subjt:  NESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYPKEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVI

Query:  FLEAMKRAYHRHTVELLRNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECAVLHFVSKLPTPDILEIIKDV
        +LE++KRAYHR++ EL    +     K   E RELA  LSG Y+GAARNK+R +IL +VK+GVE+AF DAP  L FLE A+L F ++L   DI++I KDV
Subjt:  FLEAMKRAYHRHTVELLRNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECAVLHFVSKLPTPDILEIIKDV

Query:  QNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESIS-ASDHEDIHDEEKRDEEDEEEVPL
        Q R  ++NTDEDPSGWRP  TF+++L EK  K++ LQD+KE  + RRRGRPRK+   + KRLFDEQS S+++ESIS  SD ED  D         E+ PL
Subjt:  QNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESIS-ASDHEDIHDEEKRDEEDEEEVPL

Query:  IHSIRPSSKLRSLRISRDE
        I +IR +++ ++L+  R +
Subjt:  IHSIRPSSKLRSLRISRDE

Arabidopsis top hitse value%identityAlignment
AT2G47980.1 sister-chromatid cohesion protein 32.0e-7247.96Show/hide
Query:  NESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYPKEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVI
        +E+++ED +KEY+EETN++  +IA  KLVASD V                         PK+YLGPEIISH  +HG  V  I+K+ I  LRKK+ +I  I
Subjt:  NESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYPKEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVI

Query:  FLEAMKRAYHRHTVELLRNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECAVLHFVSKLPTPDILEIIKDV
        +LE++KRAYHR++ EL    +     K   E RELA  LSG Y+GAARNK+R +IL +VK+GVE+AF DAP  L FLE A+L F ++L   DI++I KDV
Subjt:  FLEAMKRAYHRHTVELLRNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECAVLHFVSKLPTPDILEIIKDV

Query:  QNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESIS-ASDHEDIHDEEKRDEEDEEEVPL
        Q R  ++NTDEDPSGWRP  TF+++L EK  K++ LQD+KE  + RRRGRPRK+   + KRLFDEQS S+++ESIS  SD ED  D         E+ PL
Subjt:  QNRTENINTDEDPSGWRPYHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESIS-ASDHEDIHDEEKRDEEDEEEVPL

Query:  IHSIRPSSKLRSLRISRDE
        I +IR +++ ++L+  R +
Subjt:  IHSIRPSSKLRSLRISRDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACAATGAGAGTGAAGATGAGGATGTAAGTAAAGAATATGTGGAGGAGACAAATAAAGAAGCAATCATGATTGCTGTCGCAAAGTTGGTTGCAAGTGATACAGTTTC
TAAGGACTTTTTTGTTGTTGACATTGGTATGATTATTACTGGAGTGGGAGTACTGGAGCCGTGTAACATATATCCCAAAGAGTATCTTGGTCCAGAAATTATTTCTCATT
TTCTTATACATGGGACAAGTGTAGCAGATATTGTTAAGCATTTCATTGCCATTTTGAGAAAGAAGGATGGCAATATCCCAGTTATCTTTCTTGAAGCCATGAAAAGAGCC
TACCATCGACATACAGTAGAACTCTTGAGAAATAGTGATGGGCCTTCAACAGGCAAATCCTTTCTAGAATGTAGGGAGTTGGCTGCTCGACTTTCTGGAACATATGTAGG
TGCAGCTAGGAACAAGCATAGACCAGATATTTTAAAGATCGTTAAGGATGGAGTTGAGTATGCCTTCTCTGACGCACCAATGAATTTATCTTTCCTGGAATGTGCCGTTC
TACACTTTGTATCCAAACTGCCTACACCTGATATCCTGGAAATTATCAAGGATGTCCAGAATCGAACAGAAAATATTAATACAGATGAAGACCCAAGTGGTTGGCGCCCG
TATCATACGTTTGTTGACAGCTTGCGTGAAAAGTACGCTAAAAGTGATGGTTTGCAAGATGAGAAAGAAGGAAATTCTACTAGACGTAGGGGTCGGCCCCGTAAAAAACA
TACCATACAGGGCAAGAGACTTTTTGATGAGCAAAGTACAAGTGAAGACGAGGAATCAATTAGTGCATCTGACCATGAAGATATACATGATGAAGAGAAGCGAGACGAGG
AAGATGAGGAAGAAGTACCACTCATTCATTCAATTAGACCATCCTCTAAATTGAGGTCACTTAGAATTTCAAGAGATGAAAAAAAAGGGAGTTCTACGGGAAAGGGCCAC
CACCTACATGACTTGAACCGACCCTCTGAATTCTACATCGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTACAATGAGAGTGAAGATGAGGATGTAAGTAAAGAATATGTGGAGGAGACAAATAAAGAAGCAATCATGATTGCTGTCGCAAAGTTGGTTGCAAGTGATACAGTTTC
TAAGGACTTTTTTGTTGTTGACATTGGTATGATTATTACTGGAGTGGGAGTACTGGAGCCGTGTAACATATATCCCAAAGAGTATCTTGGTCCAGAAATTATTTCTCATT
TTCTTATACATGGGACAAGTGTAGCAGATATTGTTAAGCATTTCATTGCCATTTTGAGAAAGAAGGATGGCAATATCCCAGTTATCTTTCTTGAAGCCATGAAAAGAGCC
TACCATCGACATACAGTAGAACTCTTGAGAAATAGTGATGGGCCTTCAACAGGCAAATCCTTTCTAGAATGTAGGGAGTTGGCTGCTCGACTTTCTGGAACATATGTAGG
TGCAGCTAGGAACAAGCATAGACCAGATATTTTAAAGATCGTTAAGGATGGAGTTGAGTATGCCTTCTCTGACGCACCAATGAATTTATCTTTCCTGGAATGTGCCGTTC
TACACTTTGTATCCAAACTGCCTACACCTGATATCCTGGAAATTATCAAGGATGTCCAGAATCGAACAGAAAATATTAATACAGATGAAGACCCAAGTGGTTGGCGCCCG
TATCATACGTTTGTTGACAGCTTGCGTGAAAAGTACGCTAAAAGTGATGGTTTGCAAGATGAGAAAGAAGGAAATTCTACTAGACGTAGGGGTCGGCCCCGTAAAAAACA
TACCATACAGGGCAAGAGACTTTTTGATGAGCAAAGTACAAGTGAAGACGAGGAATCAATTAGTGCATCTGACCATGAAGATATACATGATGAAGAGAAGCGAGACGAGG
AAGATGAGGAAGAAGTACCACTCATTCATTCAATTAGACCATCCTCTAAATTGAGGTCACTTAGAATTTCAAGAGATGAAAAAAAAGGGAGTTCTACGGGAAAGGGCCAC
CACCTACATGACTTGAACCGACCCTCTGAATTCTACATCGCATGACTTACCATGGTGTACAAATATCCCCAAATTGAGATATGTAGCAGTTGTGTTTATATTTATATACA
AAACGAAATTATGTTGACGTAATCTTAATTGAGAATTTGTTCGTGAACCTTGCTGAAGAATGCTACCTAAGGAGTTGTGGCTATGGTGATAATAGTTGATAATCCTGTTA
GCCTCGGACATTTCTGTGATAGCGGTAGAGTACCCCCTCTGTTGCCTCTATTATAATCAGAGGCCTTGTATGATTGTCTCTTGTCTGTCCTGCCTTTTGTTTTTACTTTG
TGTGATTTGATCTGGATATTGTGCTATTCTTAGTTCATAATGTAGATCTCACAAAATAATATAACTAATGTTTTAACTAA
Protein sequenceShow/hide protein sequence
MYNESEDEDVSKEYVEETNKEAIMIAVAKLVASDTVSKDFFVVDIGMIITGVGVLEPCNIYPKEYLGPEIISHFLIHGTSVADIVKHFIAILRKKDGNIPVIFLEAMKRA
YHRHTVELLRNSDGPSTGKSFLECRELAARLSGTYVGAARNKHRPDILKIVKDGVEYAFSDAPMNLSFLECAVLHFVSKLPTPDILEIIKDVQNRTENINTDEDPSGWRP
YHTFVDSLREKYAKSDGLQDEKEGNSTRRRGRPRKKHTIQGKRLFDEQSTSEDEESISASDHEDIHDEEKRDEEDEEEVPLIHSIRPSSKLRSLRISRDEKKGSSTGKGH
HLHDLNRPSEFYIA