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Lsi06G000250 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G000250
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr06:249967..250272
RNA-Seq ExpressionLsi06G000250
SyntenyLsi06G000250
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588556.1 hypothetical protein SDJN03_17121, partial [Cucurbita argyrosperma subsp. sororia]1.4e-2869.7Show/hide
Query:  MGGNRQKKSHSSSFSFLGLFKSKRGRKDQDHHYYEQQQGSSWEDFSCPSKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPNNS
        MGGN+ KKSH SSFSF G FKSKR RK +   +YE       ++ SCP KVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRV ET+RQTVT+ P+ +
Subjt:  MGGNRQKKSHSSSFSFLGLFKSKRGRKDQDHHYYEQQQGSSWEDFSCPSKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPNNS
KAG6590516.1 hypothetical protein SDJN03_15939, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2464.65Show/hide
Query:  MGGNRQKKSHSSSFSFLGLFKSKRGRKDQDHHYYEQQQGSSWEDFSCPSKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPNNS
        MGGNR KK+ SSSFSFL  FKSKR RK   + +     GS+W+D S PSKVWPSDADK H WVAEPGIDRKA DYI RIH +RV ET+ QTVT+ P+ +
Subjt:  MGGNRQKKSHSSSFSFLGLFKSKRGRKDQDHHYYEQQQGSSWEDFSCPSKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPNNS
KGN45870.1 hypothetical protein Csa_004960 [Cucumis sativus]3.3e-2566Show/hide
Query:  MGGNRQKKSHSSSFSFLGLFKSKRGRKDQDHHYYEQQQGSSWED-FSCPSKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPNNS
        MGGNRQKKSH SSFS    FKSKRGRK  DH+      G +W D     +KVWPSD DK H W+AEPGIDRKAKDYIDRI+RNRVFE++RQTVT+ PN +
Subjt:  MGGNRQKKSHSSSFSFLGLFKSKRGRKDQDHHYYEQQQGSSWED-FSCPSKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPNNS
KGN45873.1 hypothetical protein Csa_005148 [Cucumis sativus]7.3e-2565.62Show/hide
Query:  GGNRQKKSHSSSFSFLGLFKSKRGRKDQDHHYYEQQQGSSWEDFSCPSKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPN
        G +RQKK+H SSFS    FKSKRGRK   +     + G++WED    SKVWPSD DK +RWVAEPGIDRKAKDYIDRI++NRVFET+RQTVT+ PN
Subjt:  GGNRQKKSHSSSFSFLGLFKSKRGRKDQDHHYYEQQQGSSWEDFSCPSKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPN
KGN65989.1 hypothetical protein Csa_006868 [Cucumis sativus]5.0e-4286.73Show/hide
Query:  MGGNRQKKSHSSSFSFLGLFKSKRGRKDQDHHYYEQQQGSSWEDFSCPSKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPNN
        MGGNRQKKSH+SSFSFLGLFKSKR  +  DH+Y  QQQG+SWEDFSCPSKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFET RQTVTLPP +
Subjt:  MGGNRQKKSHSSSFSFLGLFKSKRGRKDQDHHYYEQQQGSSWEDFSCPSKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPNN
TrEMBL top hitse value%identityAlignment
A0A0A0K7Y2 Uncharacterized protein1.6e-2566Show/hide
Query:  MGGNRQKKSHSSSFSFLGLFKSKRGRKDQDHHYYEQQQGSSWED-FSCPSKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPNNS
        MGGNRQKKSH SSFS    FKSKRGRK  DH+      G +W D     +KVWPSD DK H W+AEPGIDRKAKDYIDRI+RNRVFE++RQTVT+ PN +
Subjt:  MGGNRQKKSHSSSFSFLGLFKSKRGRKDQDHHYYEQQQGSSWED-FSCPSKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPNNS
A0A0A0K8W0 Uncharacterized protein3.5e-2565.62Show/hide
Query:  GGNRQKKSHSSSFSFLGLFKSKRGRKDQDHHYYEQQQGSSWEDFSCPSKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPN
        G +RQKK+H SSFS    FKSKRGRK   +     + G++WED    SKVWPSD DK +RWVAEPGIDRKAKDYIDRI++NRVFET+RQTVT+ PN
Subjt:  GGNRQKKSHSSSFSFLGLFKSKRGRKDQDHHYYEQQQGSSWEDFSCPSKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPN
A0A0A0KBW1 Uncharacterized protein3.5e-2565Show/hide
Query:  MGGNRQKKSHSSSFSFLGLFKSKRGRKDQDHHYYEQQQGSSW-EDFSCPSKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPNNS
        MGGNRQKKSH SSFS    FKS+RGRK  DH+      G +W ++    +KVWPSD DK H WVAEPGIDRKAKDYIDRI+RNRVFE++RQTVT+ PN +
Subjt:  MGGNRQKKSHSSSFSFLGLFKSKRGRKDQDHHYYEQQQGSSW-EDFSCPSKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPNNS
A0A0A0LY99 Uncharacterized protein2.4e-4286.73Show/hide
Query:  MGGNRQKKSHSSSFSFLGLFKSKRGRKDQDHHYYEQQQGSSWEDFSCPSKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPNN
        MGGNRQKKSH+SSFSFLGLFKSKR  +  DH+Y  QQQG+SWEDFSCPSKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFET RQTVTLPP +
Subjt:  MGGNRQKKSHSSSFSFLGLFKSKRGRKDQDHHYYEQQQGSSWEDFSCPSKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPNN
A0A5A7SYN4 Uncharacterized protein5.1e-2465.31Show/hide
Query:  MGGNRQKKSHSSSFSFLGLFKSKRGRKDQDHHYYEQQQGSSW-EDFSCPSKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPN
        MGG++ KKSH SSFSF   FKSK  +K +DH+      G SW +D S   KVWPSD DK H WVAEPGIDRKAKDYIDRI+RNRVFE++RQTVT+P N
Subjt:  MGGNRQKKSHSSSFSFLGLFKSKRGRKDQDHHYYEQQQGSSW-EDFSCPSKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05858.1 unknown protein4.9e-1142.16Show/hide
Query:  MGGNRQKKSHSSS-FSFLGLFKSKRGRKDQDHHYYEQQQGSSWEDFSCPSKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPNNS
        MGG  + +SHSS  FS    FK++R         +  +   SW+DF    K   SD DK + WVAEPGIDRKA  +I + H  RV E++RQ  TL P  S
Subjt:  MGGNRQKKSHSSS-FSFLGLFKSKRGRKDQDHHYYEQQQGSSWEDFSCPSKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPNNS

Query:  DR
        ++
Subjt:  DR
AT5G26620.1 unknown protein1.9e-1048Show/hide
Query:  GRKDQDHHYYEQQQGSSWEDFSCPSKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPNNS
        G +   HH  E    +SW+D     K W SD DK + WVAEPGIDRKA  +I + H +RV E++RQ  TLPP  S
Subjt:  GRKDQDHHYYEQQQGSSWEDFSCPSKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPNNS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGAAACAGGCAGAAAAAATCCCATTCTTCTTCATTTTCTTTCTTGGGGCTGTTCAAATCAAAAAGAGGCAGAAAAGATCAAGATCATCATTACTACGAGCAACA
GCAAGGCAGCAGCTGGGAGGACTTCTCATGCCCTAGCAAGGTGTGGCCGAGCGATGCTGATAAATGCCACCGTTGGGTGGCTGAACCCGGCATCGATCGAAAAGCCAAAG
ATTACATCGACAGGATCCATCGTAACCGCGTCTTTGAAACCCAACGCCAAACCGTCACCCTTCCTCCTAATAATTCCGACCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGAAACAGGCAGAAAAAATCCCATTCTTCTTCATTTTCTTTCTTGGGGCTGTTCAAATCAAAAAGAGGCAGAAAAGATCAAGATCATCATTACTACGAGCAACA
GCAAGGCAGCAGCTGGGAGGACTTCTCATGCCCTAGCAAGGTGTGGCCGAGCGATGCTGATAAATGCCACCGTTGGGTGGCTGAACCCGGCATCGATCGAAAAGCCAAAG
ATTACATCGACAGGATCCATCGTAACCGCGTCTTTGAAACCCAACGCCAAACCGTCACCCTTCCTCCTAATAATTCCGACCGTTAA
Protein sequenceShow/hide protein sequence
MGGNRQKKSHSSSFSFLGLFKSKRGRKDQDHHYYEQQQGSSWEDFSCPSKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPNNSDR