CuGenDBv2

Gene ID	Lsi06G000350
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	NAD(P)H-quinone oxidoreductase chain 4, chloroplastic
Genome location	chr06:351888..353461
RNA-Seq Expression	Lsi06G000350
Synteny	Lsi06G000350
Gene Ontology terms	GO:0042773 - ATP synthesis coupled electron transport (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function) GO:0048038 - quinone binding (molecular function)
InterPro domains	IPR001750 - NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit IPR003918 - NADH:ubiquinone oxidoreductase

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

ABI97463.1 NADH-plastoquinone oxidoreductase subunit 4, partial [Cucumis sativus]

4.1e-29

98.61

Show/hide

Query:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP
        +GIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP
Subjt:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP

YP_009004091.1 NADH-plastoquinone oxidoreductase subunit 4 [Cucumis hystrix]

4.1e-29

98.61

Show/hide

Query:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP
        +GIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP
Subjt:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP

YP_009317436.1 NADH dehydrogenase subunit 4 [Coccinia grandis]

4.1e-29

98.61

Show/hide

Query:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP
        +GIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP
Subjt:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP

YP_009326040.1 NADH dehydrogenase subunit 4 [Citrullus lanatus]

4.1e-29

98.61

Show/hide

Query:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP
        +GIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP
Subjt:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP

YP_009456197.1 NADH dehydrogenase subunit 4 [Lagenaria siceraria]

4.1e-29

98.61

Show/hide

Query:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP
        +GIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP
Subjt:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP

TrEMBL top hits

e value

%identity

Alignment

A0A1P8LE40 NAD(P)H-quinone oxidoreductase chain 4

2.0e-29

98.61

Show/hide

Query:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP
        +GIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP
Subjt:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP

A0A1P8LEU5 NAD(P)H-quinone oxidoreductase chain 4

2.0e-29

98.61

Show/hide

Query:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP
        +GIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP
Subjt:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP

A0A1X9Q182 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic

2.0e-29

98.61

Show/hide

Query:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP
        +GIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP
Subjt:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP

A0A218KG94 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic

2.0e-29

98.61

Show/hide

Query:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP
        +GIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP
Subjt:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP

A0A2Z2CH55 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic

2.0e-29

98.61

Show/hide

Query:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP
        +GIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP
Subjt:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP

SwissProt top hits

e value

%identity

Alignment

Q09WW8 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic

2.9e-30

93.06

Show/hide

Query:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP
        +G+GSI+DTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGG+AI IPKIFTTFSILSMASLALP
Subjt:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP

Q0ZIW8 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic

5.0e-30

90.28

Show/hide

Query:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP
        +GIGSI+DTGLNGAILQIISHGF+GAALFFLAGTSYDRIRL+YLDEMGG+AIP+PKIFT FSILSMASLALP
Subjt:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP

Q2PMN2 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic

5.0e-30

90.28

Show/hide

Query:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP
        +GIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDR+RL+YLDEMGG+AIP+PKIFT F+ILSMASLALP
Subjt:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP

Q49KU8 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic

1.9e-29

91.67

Show/hide

Query:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP
        +GIGSI+DTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGG+AI +PKIFT FSILSMASLALP
Subjt:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP

Q4VZL8 NAD(P)H-quinone oxidoreductase chain 4, chloroplastic

5.3e-32

98.61

Show/hide

Query:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP
        +GIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP
Subjt:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP

Arabidopsis top hits

e value

%identity

Alignment

ATCG01050.1 NADH-Ubiquinone/plastoquinone (complex I) protein

3.3e-29

88.89

Show/hide

Query:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP
        +GI SI+D GLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGG+AI IPKIFT F+ILSMASLALP
Subjt:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALP

ATMG00580.1 NADH dehydrogenase subunit 4

3.0e-06

32.14

Show/hide

Query:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPDSFHKKNETAIL
        +G+ S +  G+ G+IL ++SHG + +ALF   G  YDR +   +   GGL   +P + T F   ++A+++ P +     E  IL
Subjt:  MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPDSFHKKNETAIL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGAATTGGTTCTATAAGCGATACGGGACTGAATGGAGCTATTTTACAAATAATCTCTCATGGATTTATCGGCGCTGCGCTTTTTTTCTTGGCGGGAACAAGTTATGA
TAGAATACGTCTGGTTTATCTCGATGAAATGGGAGGACTGGCTATCCCAATTCCAAAAATCTTTACGACTTTCAGTATCTTATCGATGGCTTCCCTTGCATTGCCCGATA
GTTTTCATAAAAAAAATGAAACAGCAATACTATAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGLAIPIPKIFTTFSILSMASLALPDSFHKKNETAIL

Lsi06G000350 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome