; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G000380 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G000380
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit 5, chloroplastic
Genome locationchr06:356730..358259
RNA-Seq ExpressionLsi06G000380
SyntenyLsi06G000380
Gene Ontology termsGO:0005622 - intracellular (cellular component)
InterPro domainsIPR001750 - NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFP87573.1 NAD(P)H-quinone oxidoreductase subunit 5 chloroplastic [Phtheirospermum japonicum]4.2e-3860.87Show/hide
Query:  MYGFWFTRPTAANACQKAFVTNR-------------------------VGDFGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL
        + GFWFTRP AANACQKAFVTNR                         +   GAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL
Subjt:  MYGFWFTRPTAANACQKAFVTNR-------------------------VGDFGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL

Query:  FIVIPYIMNL----------------------IALIGSGSIIHSMESVVGYSPDKSQNMEF
        FIVIPYIM L                      +  +GSGS+IHSME++VGYSPDKSQNM F
Subjt:  FIVIPYIMNL----------------------IALIGSGSIIHSMESVVGYSPDKSQNMEF

KAF2908121.1 hypothetical protein DAI22_12g159400 [Oryza sativa Japonica Group]1.7e-3965.31Show/hide
Query:  MYGFWFTRPTAANACQKAFVTNRVGDFG-----------AVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALI
        + GFWFTRP AA+ACQKAFVTNRVGDFG            VAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFL+ARL PLFI +P IM+ I+LI
Subjt:  MYGFWFTRPTAANACQKAFVTNRVGDFG-----------AVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALI

Query:  ------------------------GSGSIIHSMESVVGYSPDKSQNM
                                GSGS+IHSME +VGYSPDKSQNM
Subjt:  ------------------------GSGSIIHSMESVVGYSPDKSQNM

TYG91432.1 hypothetical protein ES288_A12G261300v1 [Gossypium darwinii]7.6e-4058.29Show/hide
Query:  MYGFWFTRPTAANACQKAFVTNRVGDFGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALIG----------
        + GFWFTRP AANAC+KAFVTNR+GDF  VAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLI+LIG          
Subjt:  MYGFWFTRPTAANACQKAFVTNRVGDFGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALIG----------

Query:  ---------------------------------------------------SGSIIHSMESVVGYSPDKSQNMEF
                                                           SGSIIHSME++VGYSP+KSQNM F
Subjt:  ---------------------------------------------------SGSIIHSMESVVGYSPDKSQNMEF

TYH97733.1 hypothetical protein ES332_A12G262300v1 [Gossypium tomentosum]2.2e-3958.29Show/hide
Query:  MYGFWFTRPTAANACQKAFVTNRVGDFGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALIG----------
        + GFWFTRP AANACQKAFVTNR+GDF  VAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAA IFLVARLLPLFIVIPYIMNLI+LIG          
Subjt:  MYGFWFTRPTAANACQKAFVTNRVGDFGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALIG----------

Query:  ---------------------------------------------------SGSIIHSMESVVGYSPDKSQNMEF
                                                           SGSIIHSME++VGYSP+KSQNM F
Subjt:  ---------------------------------------------------SGSIIHSMESVVGYSPDKSQNMEF

TYI35915.1 hypothetical protein ES332_A03G108700v1 [Gossypium tomentosum]2.4e-3854.59Show/hide
Query:  MYGFWFTRPTAANACQKAFVTNRVGDFGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALIG----------
        + GFWFTRP AANACQKAFVTNR+GDF  VAKSAQFPL+VWLPDAMEGPTPISA+IHAATMVA GIFLVARLLPLFIVIPYIMNLI+ IG          
Subjt:  MYGFWFTRPTAANACQKAFVTNRVGDFGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALIG----------

Query:  ---------------------------------------------------SGSIIHSMESVVGYSPDKSQNMEFRSLNSIKKQL
                                                           SGSIIHSME++VGYSP+KSQNM F  +  +KK +
Subjt:  ---------------------------------------------------SGSIIHSMESVVGYSPDKSQNMEFRSLNSIKKQL

TrEMBL top hitse value%identityAlignment
A0A249RZL2 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic7.7e-3849.77Show/hide
Query:  MYGFWFTRPTAANACQKAFVTNRVGDF------------------------------------------------GAVAKSAQFPLHVWLPDAMEGPTPI
        + GFWFTRPTAANACQKAFVTNRVGDF                                                GAVAKSAQFPLHVWLPDAMEGPTPI
Subjt:  MYGFWFTRPTAANACQKAFVTNRVGDF------------------------------------------------GAVAKSAQFPLHVWLPDAMEGPTPI

Query:  SALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALI-------------------------------------------------------------GS
        SALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALI                                                             GS
Subjt:  SALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALI-------------------------------------------------------------GS

Query:  GSIIHSMESVVGYSPDKSQNM
        GSIIHSMESVVGYSPDKSQNM
Subjt:  GSIIHSMESVVGYSPDKSQNM

A0A5D2EE12 NAD(P)H dehydrogenase subunit 53.7e-4058.29Show/hide
Query:  MYGFWFTRPTAANACQKAFVTNRVGDFGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALIG----------
        + GFWFTRP AANAC+KAFVTNR+GDF  VAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLI+LIG          
Subjt:  MYGFWFTRPTAANACQKAFVTNRVGDFGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALIG----------

Query:  ---------------------------------------------------SGSIIHSMESVVGYSPDKSQNMEF
                                                           SGSIIHSME++VGYSP+KSQNM F
Subjt:  ---------------------------------------------------SGSIIHSMESVVGYSPDKSQNMEF

A0A5D2N2Q4 NAD(P)H dehydrogenase subunit 51.1e-3958.29Show/hide
Query:  MYGFWFTRPTAANACQKAFVTNRVGDFGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALIG----------
        + GFWFTRP AANACQKAFVTNR+GDF  VAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAA IFLVARLLPLFIVIPYIMNLI+LIG          
Subjt:  MYGFWFTRPTAANACQKAFVTNRVGDFGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALIG----------

Query:  ---------------------------------------------------SGSIIHSMESVVGYSPDKSQNMEF
                                                           SGSIIHSME++VGYSP+KSQNM F
Subjt:  ---------------------------------------------------SGSIIHSMESVVGYSPDKSQNMEF

A0A5D2R850 NAD(P)H dehydrogenase subunit 51.2e-3854.59Show/hide
Query:  MYGFWFTRPTAANACQKAFVTNRVGDFGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALIG----------
        + GFWFTRP AANACQKAFVTNR+GDF  VAKSAQFPL+VWLPDAMEGPTPISA+IHAATMVA GIFLVARLLPLFIVIPYIMNLI+ IG          
Subjt:  MYGFWFTRPTAANACQKAFVTNRVGDFGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALIG----------

Query:  ---------------------------------------------------SGSIIHSMESVVGYSPDKSQNMEFRSLNSIKKQL
                                                           SGSIIHSME++VGYSP+KSQNM F  +  +KK +
Subjt:  ---------------------------------------------------SGSIIHSMESVVGYSPDKSQNMEFRSLNSIKKQL

A0A5J5WSU3 NAD(P)H dehydrogenase subunit 55.9e-3850Show/hide
Query:  MYGFWFTRPTAANACQKAFVTNRVGDF------------------------------------GAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAA
        + GFWFTRP AANACQKAFVTNR+GDF                                    G VAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAA
Subjt:  MYGFWFTRPTAANACQKAFVTNRVGDF------------------------------------GAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAA

Query:  GIFLVARLLPLFIVIPYIMNLIALI--------------------------------------------------GSGSIIHSMESVVGYSPDKSQNMEF
        GIFLVARLLPLFIVIPYIMNLI+LI                                                   SGSIIHSME++VGYSP+KSQNM F
Subjt:  GIFLVARLLPLFIVIPYIMNLIALI--------------------------------------------------GSGSIIHSMESVVGYSPDKSQNMEF

Query:  RSLNSIKKQL
          +  ++K L
Subjt:  RSLNSIKKQL

SwissProt top hitse value%identityAlignment
A0ZZ82 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic1.9e-3846.64Show/hide
Query:  MYGFWFTRPTAANACQKAFVTNRVGDF------------------------------------------------GAVAKSAQFPLHVWLPDAMEGPTPI
        + GFWFTRP AANACQKAFVTNR+GDF                                                GAVAKSAQFPLHVWLPDAMEGPTPI
Subjt:  MYGFWFTRPTAANACQKAFVTNRVGDF------------------------------------------------GAVAKSAQFPLHVWLPDAMEGPTPI

Query:  SALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALIG-------------------------------------------------------------S
        SALIHAATMVAAGIFLVARL PLFIVIPYIMNLI+LIG                                                             S
Subjt:  SALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALIG-------------------------------------------------------------S

Query:  GSIIHSMESVVGYSPDKSQNMEF
        GSIIHSME++VGYSP+KSQNM F
Subjt:  GSIIHSMESVVGYSPDKSQNMEF

Q09WX1 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic1.9e-3847.06Show/hide
Query:  MYGFWFTRPTAANACQKAFVTNRVGDF------------------------------------------------GAVAKSAQFPLHVWLPDAMEGPTPI
        + GFWFTRPTAANACQKAFVTNRVGDF                                                GA+AKSAQFPLHVWLPDAMEGPTPI
Subjt:  MYGFWFTRPTAANACQKAFVTNRVGDF------------------------------------------------GAVAKSAQFPLHVWLPDAMEGPTPI

Query:  SALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIAL-------------------------------------------------------------IGS
        SALIHAATMVAAGIFL ARLLPLFIV+PYIMNLIAL                                                             +GS
Subjt:  SALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIAL-------------------------------------------------------------IGS

Query:  GSIIHSMESVVGYSPDKSQNM
        GSIIHSMES+VGYSPDKSQN+
Subjt:  GSIIHSMESVVGYSPDKSQNM

Q2L960 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic6.7e-3947.09Show/hide
Query:  MYGFWFTRPTAANACQKAFVTNRVGDF------------------------------------------------GAVAKSAQFPLHVWLPDAMEGPTPI
        + GFWFTRP AANACQKAFVTNR+GDF                                                GAVAKSAQFPLHVWLPDAMEGPTPI
Subjt:  MYGFWFTRPTAANACQKAFVTNRVGDF------------------------------------------------GAVAKSAQFPLHVWLPDAMEGPTPI

Query:  SALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALIG-------------------------------------------------------------S
        SALIHAATMVAAGIFLVARLLPLFIVIPYIMNLI+LIG                                                             S
Subjt:  SALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALIG-------------------------------------------------------------S

Query:  GSIIHSMESVVGYSPDKSQNMEF
        GSIIHSME++VGYSP+KSQNM F
Subjt:  GSIIHSMESVVGYSPDKSQNMEF

Q2QD43 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic6.0e-4049.32Show/hide
Query:  MYGFWFTRPTAANACQKAFVTNRVGDF------------------------------------------------GAVAKSAQFPLHVWLPDAMEGPTPI
        + GFWFTRPTAANACQKAFVTNRVGDF                                                GAVAKSAQFPLHVWLPDAMEGPTPI
Subjt:  MYGFWFTRPTAANACQKAFVTNRVGDF------------------------------------------------GAVAKSAQFPLHVWLPDAMEGPTPI

Query:  SALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALI-------------------------------------------------------------GS
        SALIHAATMVAAGIFLVARLLPLFI IPYIMNLIALI                                                             GS
Subjt:  SALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALI-------------------------------------------------------------GS

Query:  GSIIHSMESVVGYSPDKSQNM
        GSIIHSMESVVGYSPDKSQNM
Subjt:  GSIIHSMESVVGYSPDKSQNM

Q7YJT6 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic2.5e-3847.51Show/hide
Query:  MYGFWFTRPTAANACQKAFVTNRVGDF------------------------------------------------GAVAKSAQFPLHVWLPDAMEGPTPI
        + GFWFTRPTAANACQKAFVTNRVGDF                                                GAVAKSAQFPLHVWLPDAMEGPTPI
Subjt:  MYGFWFTRPTAANACQKAFVTNRVGDF------------------------------------------------GAVAKSAQFPLHVWLPDAMEGPTPI

Query:  SALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALI-------------------------------------------------------------GS
        SALIHAATMVAAGIFLVARLLPLF VIPYIMNLI+LI                                                             GS
Subjt:  SALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALI-------------------------------------------------------------GS

Query:  GSIIHSMESVVGYSPDKSQNM
        GSIIHSME +VGYSPDKSQN+
Subjt:  GSIIHSMESVVGYSPDKSQNM

Arabidopsis top hitse value%identityAlignment
ATCG01010.1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein3.8e-3745.7Show/hide
Query:  MYGFWFTRPTAANACQKAFVTNRVGDF------------------------------------------------GAVAKSAQFPLHVWLPDAMEGPTPI
        + GFWFTRP AANACQKAFVTNRVGDF                                                G +AKSAQFPLHVWLPDAMEGPTPI
Subjt:  MYGFWFTRPTAANACQKAFVTNRVGDF------------------------------------------------GAVAKSAQFPLHVWLPDAMEGPTPI

Query:  SALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALI-------------------------------------------------------------GS
        SALIHAATMVAAGIFLVARLLPLFIVIP IM +I+LI                                                             GS
Subjt:  SALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALI-------------------------------------------------------------GS

Query:  GSIIHSMESVVGYSPDKSQNM
        GSIIHSME++VGYSPDKSQNM
Subjt:  GSIIHSMESVVGYSPDKSQNM

ATMG00060.1 NADH dehydrogenase subunit 5C1.8e-1535.19Show/hide
Query:  FWFTRPTAANACQKAFVTNRVGDF---------------------------------------------------GAVAKSAQFPLHVWLPDAMEGPTPI
        FWFTR  A  A  KA + NRVGDF                                                   GAV KSAQ   H W PDAMEGPTP+
Subjt:  FWFTRPTAANACQKAFVTNRVGDF---------------------------------------------------GAVAKSAQFPLHVWLPDAMEGPTPI

Query:  SALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALIG---------SGSIIHSMESVVGYS
        SA IHAATMV AG+F++AR  PLF   P  + +I   G         +G + + ++ V+ YS
Subjt:  SALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALIG---------SGSIIHSMESVVGYS

ATMG00513.1 NADH dehydrogenase 5A1.8e-1535.19Show/hide
Query:  FWFTRPTAANACQKAFVTNRVGDF---------------------------------------------------GAVAKSAQFPLHVWLPDAMEGPTPI
        FWFTR  A  A  KA + NRVGDF                                                   GAV KSAQ   H W PDAMEGPTP+
Subjt:  FWFTRPTAANACQKAFVTNRVGDF---------------------------------------------------GAVAKSAQFPLHVWLPDAMEGPTPI

Query:  SALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALIG---------SGSIIHSMESVVGYS
        SA IHAATMV AG+F++AR  PLF   P  + +I   G         +G + + ++ V+ YS
Subjt:  SALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALIG---------SGSIIHSMESVVGYS

ATMG00665.1 NADH dehydrogenase 5B1.8e-1535.19Show/hide
Query:  FWFTRPTAANACQKAFVTNRVGDF---------------------------------------------------GAVAKSAQFPLHVWLPDAMEGPTPI
        FWFTR  A  A  KA + NRVGDF                                                   GAV KSAQ   H W PDAMEGPTP+
Subjt:  FWFTRPTAANACQKAFVTNRVGDF---------------------------------------------------GAVAKSAQFPLHVWLPDAMEGPTPI

Query:  SALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALIG---------SGSIIHSMESVVGYS
        SA IHAATMV AG+F++AR  PLF   P  + +I   G         +G + + ++ V+ YS
Subjt:  SALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALIG---------SGSIIHSMESVVGYS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGGTTTTTGGTTCACTCGACCTACTGCGGCGAATGCTTGTCAAAAGGCATTTGTAACTAATCGCGTAGGGGATTTTGGTGCGGTTGCTAAATCGGCTCAATTTCC
TCTTCATGTATGGTTACCTGATGCTATGGAGGGTCCTACCCCCATTTCGGCTCTTATACATGCTGCTACGATGGTAGCAGCGGGAATTTTTCTTGTCGCTCGGCTTCTTC
CGCTTTTTATAGTAATACCTTACATCATGAATCTAATAGCTTTGATAGGATCTGGGTCCATTATTCACTCAATGGAATCCGTTGTTGGATATTCTCCAGATAAAAGTCAG
AATATGGAATTCCGTTCACTCAATTCAATCAAGAAGCAATTGATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATGGTTTTTGGTTCACTCGACCTACTGCGGCGAATGCTTGTCAAAAGGCATTTGTAACTAATCGCGTAGGGGATTTTGGTGCGGTTGCTAAATCGGCTCAATTTCC
TCTTCATGTATGGTTACCTGATGCTATGGAGGGTCCTACCCCCATTTCGGCTCTTATACATGCTGCTACGATGGTAGCAGCGGGAATTTTTCTTGTCGCTCGGCTTCTTC
CGCTTTTTATAGTAATACCTTACATCATGAATCTAATAGCTTTGATAGGATCTGGGTCCATTATTCACTCAATGGAATCCGTTGTTGGATATTCTCCAGATAAAAGTCAG
AATATGGAATTCCGTTCACTCAATTCAATCAAGAAGCAATTGATTTGA
Protein sequenceShow/hide protein sequence
MYGFWFTRPTAANACQKAFVTNRVGDFGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLIALIGSGSIIHSMESVVGYSPDKSQ
NMEFRSLNSIKKQLI