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Lsi06G000450 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G000450
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr06:367244..367569
RNA-Seq ExpressionLsi06G000450
SyntenyLsi06G000450
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA3021341.1 ribulose-1,5-bisphosphate carboxylase oxygenase large subunit, partial (chloroplast), partial [Olea europaea subsp. europaea]2.8e-0673.68Show/hide
Query:  SFCSWISKFLECPKFYLSVQIWVNPSKDISEQGSSTMP
        S C WI KFLEC K YLS+QIWVN  K+ISEQGSST+P
Subjt:  SFCSWISKFLECPKFYLSVQIWVNPSKDISEQGSSTMP

KAF1864804.1 hypothetical protein Lal_00031763 [Lupinus albus]4.8e-0672.73Show/hide
Query:  VNPSKDISEQGSSTMPNVSEEEEQSKRSMPKSKPTPWTATKNPI
        V+ + +ISEQGSSTMPNVS++EEQSKR MPKSKPTP T T N I
Subjt:  VNPSKDISEQGSSTMPNVSEEEEQSKRSMPKSKPTPWTATKNPI

KAF1866307.1 hypothetical protein Lal_00024312 [Lupinus albus]8.4e-1170.69Show/hide
Query:  YLSVQIWVNPSKDISEQGSSTMPNVSEEEEQSKRSMPKSKPTPWTATKNPIGFQSSTI
        Y +  + V+ + +ISEQGSSTMPNVS++EEQSKR M KSKPTPWTATKN I FQSSTI
Subjt:  YLSVQIWVNPSKDISEQGSSTMPNVSEEEEQSKRSMPKSKPTPWTATKNPIGFQSSTI

KAG0537797.1 hypothetical protein BDA96_03G179100 [Sorghum bicolor]4.9e-1976.56Show/hide
Query:  CSWISKFLECPKFYLSVQIWVNPSKDISEQGSSTMPNVSEEEEQSKRSMPKSKPTPWTATKNPI
        CSWIS FLEC KF+LS+Q+W+N SK+ISEQGSS MPNVSE+EEQSK SM KS+PTPWTA KN I
Subjt:  CSWISKFLECPKFYLSVQIWVNPSKDISEQGSSTMPNVSEEEEQSKRSMPKSKPTPWTATKNPI

PNT72152.1 hypothetical protein BRADI_2g40465v3 [Brachypodium distachyon]9.6e-1575.86Show/hide
Query:  ISKFLECPKFYLSVQIWVNPSKDISEQGSSTMPNVSEEEEQSKRSMPKSKPTPWTATK
        IS FLEC K +LS+QIW+N SK+ISEQGSS MPNVSE+EEQSK SM KS+PTPWTA K
Subjt:  ISKFLECPKFYLSVQIWVNPSKDISEQGSSTMPNVSEEEEQSKRSMPKSKPTPWTATK

TrEMBL top hitse value%identityAlignment
A0A2K2DD07 Uncharacterized protein4.6e-1575.86Show/hide
Query:  ISKFLECPKFYLSVQIWVNPSKDISEQGSSTMPNVSEEEEQSKRSMPKSKPTPWTATK
        IS FLEC K +LS+QIW+N SK+ISEQGSS MPNVSE+EEQSK SM KS+PTPWTA K
Subjt:  ISKFLECPKFYLSVQIWVNPSKDISEQGSSTMPNVSEEEEQSKRSMPKSKPTPWTATK

A0A6A5LQY1 Uncharacterized protein2.3e-0672.73Show/hide
Query:  VNPSKDISEQGSSTMPNVSEEEEQSKRSMPKSKPTPWTATKNPI
        V+ + +ISEQGSSTMPNVS++EEQSKR MPKSKPTP T T N I
Subjt:  VNPSKDISEQGSSTMPNVSEEEEQSKRSMPKSKPTPWTATKNPI

A0A6A5LZD8 Uncharacterized protein4.1e-1170.69Show/hide
Query:  YLSVQIWVNPSKDISEQGSSTMPNVSEEEEQSKRSMPKSKPTPWTATKNPIGFQSSTI
        Y +  + V+ + +ISEQGSSTMPNVS++EEQSKR M KSKPTPWTATKN I FQSSTI
Subjt:  YLSVQIWVNPSKDISEQGSSTMPNVSEEEEQSKRSMPKSKPTPWTATKNPIGFQSSTI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAAGCAATCTTGTATCAGACTAGACTCTTTTTGTAGTTGGATCTCCAAGTTTTTGGAATGCCCCAAATTCTACTTGAGCGTCCAAATCTGGGTCAATCCCAGCAA
AGACATCTCTGAACAAGGTTCTAGCACCATGCCAAATGTGTCCGAAGAAGAAGAGCAAAGCAAACGAAGCATGCCCAAAAGTAAACCAACCCCTTGGACTGCTACGAAAA
ACCCCATCGGATTTCAAAGTAGCACGATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAAGCAATCTTGTATCAGACTAGACTCTTTTTGTAGTTGGATCTCCAAGTTTTTGGAATGCCCCAAATTCTACTTGAGCGTCCAAATCTGGGTCAATCCCAGCAA
AGACATCTCTGAACAAGGTTCTAGCACCATGCCAAATGTGTCCGAAGAAGAAGAGCAAAGCAAACGAAGCATGCCCAAAAGTAAACCAACCCCTTGGACTGCTACGAAAA
ACCCCATCGGATTTCAAAGTAGCACGATCTAA
Protein sequenceShow/hide protein sequence
MKKQSCIRLDSFCSWISKFLECPKFYLSVQIWVNPSKDISEQGSSTMPNVSEEEEQSKRSMPKSKPTPWTATKNPIGFQSSTI