; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G000500 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G000500
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionIGR domain-containing protein
Genome locationchr06:378642..386579
RNA-Seq ExpressionLsi06G000500
SyntenyLsi06G000500
Gene Ontology termsNA
InterPro domainsIPR019083 - IGR protein motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024029.1 hypothetical protein SDJN02_15058 [Cucurbita argyrosperma subsp. argyrosperma]1.4e-1797.92Show/hide
Query:  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGLPCKH
        VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLG+PCKH
Subjt:  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGLPCKH
XP_022961412.1 uncharacterized protein LOC111461991 [Cucurbita moschata]1.4e-1797.92Show/hide
Query:  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGLPCKH
        VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLG+PCKH
Subjt:  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGLPCKH
XP_023516779.1 uncharacterized protein LOC111780577 [Cucurbita pepo subsp. pepo]1.4e-1797.92Show/hide
Query:  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGLPCKH
        VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLG+PCKH
Subjt:  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGLPCKH
XP_038879495.1 uncharacterized protein LOC120071346 isoform X2 [Benincasa hispida]1.4e-1797.92Show/hide
Query:  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGLPCKH
        VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLG+PCKH
Subjt:  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGLPCKH
XP_038879496.1 uncharacterized protein LOC120071346 isoform X3 [Benincasa hispida]1.4e-1797.92Show/hide
Query:  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGLPCKH
        VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLG+PCKH
Subjt:  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGLPCKH
TrEMBL top hitse value%identityAlignment
A0A1S3BPD9 uncharacterized protein LOC1034921089.0e-1895.83Show/hide
Query:  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGLPCKH
        VGIPEFLNG+GHGVESHVAKLESEIGDFQKLLVTRTLKLKKLG+PCKH
Subjt:  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGLPCKH
A0A5D3CEV1 IGR motif protein9.0e-1895.83Show/hide
Query:  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGLPCKH
        VGIPEFLNG+GHGVESHVAKLESEIGDFQKLLVTRTLKLKKLG+PCKH
Subjt:  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGLPCKH
A0A6J1HA49 uncharacterized protein LOC1114619916.9e-1897.92Show/hide
Query:  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGLPCKH
        VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLG+PCKH
Subjt:  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGLPCKH
A0A6J1HZ75 uncharacterized protein LOC1114679436.9e-1897.92Show/hide
Query:  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGLPCKH
        VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLG+PCKH
Subjt:  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGLPCKH
A0A7J8U8T7 IGR domain-containing protein1.2e-1783.64Show/hide
Query:  LIGLQRWVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGLPCKH
        ++ L   VGIPEFLNGVGHGVE+HVAKLESEIGDFQKLLVTRTLKLKK+G+PCKH
Subjt:  LIGLQRWVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGLPCKH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05810.1 FUNCTIONS IN: molecular_function unknown9.8e-1775Show/hide
Query:  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGLPCKH
        VGIPEFL G+G G E+H+AK+E+EIGD  KLLVTRTL+LKKLG+PCKH
Subjt:  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGLPCKH
AT5G26800.1 FUNCTIONS IN: molecular_function unknown1.7e-1675Show/hide
Query:  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGLPCKH
        VGIPEFL+G+G GVE+H+AKLE+E+GD  KLLVTRTL+LKK G+PCKH
Subjt:  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGLPCKH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGCAGACGACAGGGAAGAAGTAGAAGATAATGGAGTTGAGGATGAAGGGGGAGGGGGTGTGAATCATGATGCAGATAAAAAGTTTAAACCCTACCCATCTTCTTA
TTTTTTCTCTCTCCCTCTCCTCACCTTTGCCGCTCGCCGGAACGCCCCCACCGCCCCTCTGTTGCAACCTAACGCCGTCACGCCAAGCACTGTCTTCTGCTGCAGTCCCT
TCAACTCTTGTTCACTCGCCATTGAGTGTGCTGTAGTGGTCGGCGTCTTTGTTAATGACTTGTTTGGCGATTTTGTGGGGAGTGATCTGAGAGGAATTGCGGGAATCTTA
AAGGGGTTGATAGGTCTCCAGAGATGGGTCGGGATACCAGAATTTTTAAATGGTGTTGGACATGGGGTTGAGTCCCACGTGGCTAAACTTGAATCAGAGATTGGTGACTT
CCAGAAGTTGCTTGTTACTCGCACACTTAAGCTGAAAAAACTTGGACTTCCATGCAAACAT
mRNA sequenceShow/hide mRNA sequence
ATGAGAGCAGACGACAGGGAAGAAGTAGAAGATAATGGAGTTGAGGATGAAGGGGGAGGGGGTGTGAATCATGATGCAGATAAAAAGTTTAAACCCTACCCATCTTCTTA
TTTTTTCTCTCTCCCTCTCCTCACCTTTGCCGCTCGCCGGAACGCCCCCACCGCCCCTCTGTTGCAACCTAACGCCGTCACGCCAAGCACTGTCTTCTGCTGCAGTCCCT
TCAACTCTTGTTCACTCGCCATTGAGTGTGCTGTAGTGGTCGGCGTCTTTGTTAATGACTTGTTTGGCGATTTTGTGGGGAGTGATCTGAGAGGAATTGCGGGAATCTTA
AAGGGGTTGATAGGTCTCCAGAGATGGGTCGGGATACCAGAATTTTTAAATGGTGTTGGACATGGGGTTGAGTCCCACGTGGCTAAACTTGAATCAGAGATTGGTGACTT
CCAGAAGTTGCTTGTTACTCGCACACTTAAGCTGAAAAAACTTGGACTTCCATGCAAACAT
Protein sequenceShow/hide protein sequence
MRADDREEVEDNGVEDEGGGGVNHDADKKFKPYPSSYFFSLPLLTFAARRNAPTAPLLQPNAVTPSTVFCCSPFNSCSLAIECAVVVGVFVNDLFGDFVGSDLRGIAGIL
KGLIGLQRWVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGLPCKH