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Lsi06G000620 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G000620
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAutophagy-related protein 18g isoform X1
Genome locationchr06:525257..527340
RNA-Seq ExpressionLsi06G000620
SyntenyLsi06G000620
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024019.1 hypothetical protein SDJN02_15048, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-7064.68Show/hide
Query:  MELKKDTQISMKAPFTNLQNIFNGRSLIPLPPTAEEQQQEYNTESNERTITSGPSSSSSSHLPYSLFNASPSLFLRIGSWQAVAKNEGDLLLRFDYKNKK
        MEL+KDT+IS+  PFTNL +I  G SLIPLPPT+EEQQ  YN  S+ERTITSGPSSSSSS LP  +FN   +LFLR+GSWQ V KN+GDL+L+FDY+NKK
Subjt:  MELKKDTQISMKAPFTNLQNIFNGRSLIPLPPTAEEQQQEYNTESNERTITSGPSSSSSSHLPYSLFNASPSLFLRIGSWQAVAKNEGDLLLRFDYKNKK

Query:  ISWEIVREGPSRHKI------------------------ELQSPPRFYKEIEIKPLKHFKWEAESDFTGGRASTSRKHFSVFPPGVLGVHYKRLMKNKNL
        ++WEIVREGPS+HKI                        ELQ PPRFYKEIE KP K  KW  ESDFT GRAS +R++F+VF PGVLG HYKRLMKNK+L
Subjt:  ISWEIVREGPSRHKI------------------------ELQSPPRFYKEIEIKPLKHFKWEAESDFTGGRASTSRKHFSVFPPGVLGVHYKRLMKNKNL

Query:  LEVSQKSFPTADSPYFPK
        LEVSQKSFPT  SPYFP+
Subjt:  LEVSQKSFPTADSPYFPK

XP_016900954.1 PREDICTED: uncharacterized protein LOC107991120 [Cucumis melo]6.9e-7266.06Show/hide
Query:  MELKKDTQISMKAPFTNLQNIFNGRSLIPLPP-TAEEQQQEY-NTESNERTITSGPSSSSSSHLPYSLFNASPSLFLRIGSWQAVAKNEGDLLLRFDYKN
        M+L+KDT+I+MK PFTNLQ IFNGR+L+PLP    EEQQ EY NT+SN+RTI SGPSSSS +  P + FNA+P+LFLRIGSWQ VA NE DL+L+FDY+N
Subjt:  MELKKDTQISMKAPFTNLQNIFNGRSLIPLPP-TAEEQQQEY-NTESNERTITSGPSSSSSSHLPYSLFNASPSLFLRIGSWQAVAKNEGDLLLRFDYKN

Query:  KKISWEIVREGPSRHKI------------------------ELQSPPRFYKEIEIKPLKHFKWEAESDFTGGRASTSRKHFSVFPPGVLGVHYKRLMKNK
        KKISWE+VREGPS+HKI                        ELQ+PPRFYKEIE +PLK FKWE E DFT GR S  RKHFSVF PG+LG +YKRLMKNK
Subjt:  KKISWEIVREGPSRHKI------------------------ELQSPPRFYKEIEIKPLKHFKWEAESDFTGGRASTSRKHFSVFPPGVLGVHYKRLMKNK

Query:  NLLEVSQKSFPTADSPYF
        +LLEVSQK FPTADSPYF
Subjt:  NLLEVSQKSFPTADSPYF

XP_022158816.1 uncharacterized protein LOC111025282 [Momordica charantia]5.6e-6664.38Show/hide
Query:  MELKKDTQISMKAPFTNLQNIFNGRSLIPLPPTAEEQQQEYNTESNERTITSGPSSSSS-SHLPYSLFNASPSLFLRIGSWQAVAKNEGDLLLRFDYKNK
        MEL++DT+IS+ APF+NL  I  GRSLIPLPP   EQ Q  N+ SNERTITSGPSSSSS S LP+ + NA+P+LFLRIGSWQ V +NEGDL+LRFDY+ K
Subjt:  MELKKDTQISMKAPFTNLQNIFNGRSLIPLPPTAEEQQQEYNTESNERTITSGPSSSSS-SHLPYSLFNASPSLFLRIGSWQAVAKNEGDLLLRFDYKNK

Query:  KISWEIVREGPSRHKI------------------------ELQSPPRFYKEIEIKPLKHFKWEAESDFTGGRASTSRKHFSVFPPGVLGVHYKRLMKNKN
        KISWEIVREGPS+HKI                        ELQ PPRFYKEIE K  K  KW  ESDFT GRAS +R++FSVF PGVLG HYKR+MKNK+
Subjt:  KISWEIVREGPSRHKI------------------------ELQSPPRFYKEIEIKPLKHFKWEAESDFTGGRASTSRKHFSVFPPGVLGVHYKRLMKNKN

Query:  LLEVSQKSFPTADSPYFPK
        +LEVSQKSFP   SPYFPK
Subjt:  LLEVSQKSFPTADSPYFPK

XP_022961562.1 uncharacterized protein LOC111462107 [Cucurbita moschata]2.9e-7064.68Show/hide
Query:  MELKKDTQISMKAPFTNLQNIFNGRSLIPLPPTAEEQQQEYNTESNERTITSGPSSSSSSHLPYSLFNASPSLFLRIGSWQAVAKNEGDLLLRFDYKNKK
        MEL+KDT+IS+  PFTNL +I  G SLIPLPPT+EEQQ  YN  S+ERTITSGPSSSSSS LP  +FN   +LFLR+GSWQ V KN+GDL+L+FDY+NKK
Subjt:  MELKKDTQISMKAPFTNLQNIFNGRSLIPLPPTAEEQQQEYNTESNERTITSGPSSSSSSHLPYSLFNASPSLFLRIGSWQAVAKNEGDLLLRFDYKNKK

Query:  ISWEIVREGPSRHKI------------------------ELQSPPRFYKEIEIKPLKHFKWEAESDFTGGRASTSRKHFSVFPPGVLGVHYKRLMKNKNL
        ++WEIVREGPS+HKI                        ELQ PPRFYKEIE KP K  KW  ESDFT GRAS +R++F+VF PGVLG HYKRLMKNK+L
Subjt:  ISWEIVREGPSRHKI------------------------ELQSPPRFYKEIEIKPLKHFKWEAESDFTGGRASTSRKHFSVFPPGVLGVHYKRLMKNKNL

Query:  LEVSQKSFPTADSPYFPK
        LEVSQKSFPT  SPYFP+
Subjt:  LEVSQKSFPTADSPYFPK

XP_022968779.1 uncharacterized protein LOC111467912 [Cucurbita maxima]2.9e-7064.68Show/hide
Query:  MELKKDTQISMKAPFTNLQNIFNGRSLIPLPPTAEEQQQEYNTESNERTITSGPSSSSSSHLPYSLFNASPSLFLRIGSWQAVAKNEGDLLLRFDYKNKK
        MEL+KDT+IS+  PFTNL +I  G SLIPLPPT+EEQQ  YN  S+ERTITSGPSSSSSS LP  +FN   +LFLR+GSWQ V KN+GDL+L+FDY+NKK
Subjt:  MELKKDTQISMKAPFTNLQNIFNGRSLIPLPPTAEEQQQEYNTESNERTITSGPSSSSSSHLPYSLFNASPSLFLRIGSWQAVAKNEGDLLLRFDYKNKK

Query:  ISWEIVREGPSRHKI------------------------ELQSPPRFYKEIEIKPLKHFKWEAESDFTGGRASTSRKHFSVFPPGVLGVHYKRLMKNKNL
        ++WEIVREGPS+HKI                        ELQ PPRFYKEIE KP K  KW  ESDFT GRAS +R++F+VF PGVLG HYKRLMKNK+L
Subjt:  ISWEIVREGPSRHKI------------------------ELQSPPRFYKEIEIKPLKHFKWEAESDFTGGRASTSRKHFSVFPPGVLGVHYKRLMKNKNL

Query:  LEVSQKSFPTADSPYFPK
        LEVSQKSFPT  SPYFP+
Subjt:  LEVSQKSFPTADSPYFPK

TrEMBL top hitse value%identityAlignment
A0A0A0M1F9 Uncharacterized protein2.6e-6962.39Show/hide
Query:  MELKKDTQISMKAPFTNLQNIFNGRSLIPLPPTAEEQQQE--YNTESNERTITSGPSSSSSSHLPYSLFNASPSLFLRIGSWQAVAKNEGDLLLRFDYKN
        M+L+KDT+I MK PFTNLQ IFNGR+L+PLP   EE+QQ   +NT+SN+RT  SGPSSSS +  P + FNA+P+LFLRIGSWQ VA +E DL+L+FDY+N
Subjt:  MELKKDTQISMKAPFTNLQNIFNGRSLIPLPPTAEEQQQE--YNTESNERTITSGPSSSSSSHLPYSLFNASPSLFLRIGSWQAVAKNEGDLLLRFDYKN

Query:  KKISWEIVREGPSRHKI------------------------ELQSPPRFYKEIEIKPLKHFKWEAESDFTGGRASTSRKHFSVFPPGVLGVHYKRLMKNK
        KK+SWE+V EGPS+HKI                        ELQ+PPRFYKEIE +PLK FKWE E DFT GRAS +RKHFSVF PG+LG +YKRLMKNK
Subjt:  KKISWEIVREGPSRHKI------------------------ELQSPPRFYKEIEIKPLKHFKWEAESDFTGGRASTSRKHFSVFPPGVLGVHYKRLMKNK

Query:  NLLEVSQKSFPTADSPYF
         ++EVSQK FPTA+SPYF
Subjt:  NLLEVSQKSFPTADSPYF

A0A1S4DY92 uncharacterized protein LOC1079911203.3e-7266.06Show/hide
Query:  MELKKDTQISMKAPFTNLQNIFNGRSLIPLPP-TAEEQQQEY-NTESNERTITSGPSSSSSSHLPYSLFNASPSLFLRIGSWQAVAKNEGDLLLRFDYKN
        M+L+KDT+I+MK PFTNLQ IFNGR+L+PLP    EEQQ EY NT+SN+RTI SGPSSSS +  P + FNA+P+LFLRIGSWQ VA NE DL+L+FDY+N
Subjt:  MELKKDTQISMKAPFTNLQNIFNGRSLIPLPP-TAEEQQQEY-NTESNERTITSGPSSSSSSHLPYSLFNASPSLFLRIGSWQAVAKNEGDLLLRFDYKN

Query:  KKISWEIVREGPSRHKI------------------------ELQSPPRFYKEIEIKPLKHFKWEAESDFTGGRASTSRKHFSVFPPGVLGVHYKRLMKNK
        KKISWE+VREGPS+HKI                        ELQ+PPRFYKEIE +PLK FKWE E DFT GR S  RKHFSVF PG+LG +YKRLMKNK
Subjt:  KKISWEIVREGPSRHKI------------------------ELQSPPRFYKEIEIKPLKHFKWEAESDFTGGRASTSRKHFSVFPPGVLGVHYKRLMKNK

Query:  NLLEVSQKSFPTADSPYF
        +LLEVSQK FPTADSPYF
Subjt:  NLLEVSQKSFPTADSPYF

A0A6J1E232 uncharacterized protein LOC1110252822.7e-6664.38Show/hide
Query:  MELKKDTQISMKAPFTNLQNIFNGRSLIPLPPTAEEQQQEYNTESNERTITSGPSSSSS-SHLPYSLFNASPSLFLRIGSWQAVAKNEGDLLLRFDYKNK
        MEL++DT+IS+ APF+NL  I  GRSLIPLPP   EQ Q  N+ SNERTITSGPSSSSS S LP+ + NA+P+LFLRIGSWQ V +NEGDL+LRFDY+ K
Subjt:  MELKKDTQISMKAPFTNLQNIFNGRSLIPLPPTAEEQQQEYNTESNERTITSGPSSSSS-SHLPYSLFNASPSLFLRIGSWQAVAKNEGDLLLRFDYKNK

Query:  KISWEIVREGPSRHKI------------------------ELQSPPRFYKEIEIKPLKHFKWEAESDFTGGRASTSRKHFSVFPPGVLGVHYKRLMKNKN
        KISWEIVREGPS+HKI                        ELQ PPRFYKEIE K  K  KW  ESDFT GRAS +R++FSVF PGVLG HYKR+MKNK+
Subjt:  KISWEIVREGPSRHKI------------------------ELQSPPRFYKEIEIKPLKHFKWEAESDFTGGRASTSRKHFSVFPPGVLGVHYKRLMKNKN

Query:  LLEVSQKSFPTADSPYFPK
        +LEVSQKSFP   SPYFPK
Subjt:  LLEVSQKSFPTADSPYFPK

A0A6J1HAI6 uncharacterized protein LOC1114621071.4e-7064.68Show/hide
Query:  MELKKDTQISMKAPFTNLQNIFNGRSLIPLPPTAEEQQQEYNTESNERTITSGPSSSSSSHLPYSLFNASPSLFLRIGSWQAVAKNEGDLLLRFDYKNKK
        MEL+KDT+IS+  PFTNL +I  G SLIPLPPT+EEQQ  YN  S+ERTITSGPSSSSSS LP  +FN   +LFLR+GSWQ V KN+GDL+L+FDY+NKK
Subjt:  MELKKDTQISMKAPFTNLQNIFNGRSLIPLPPTAEEQQQEYNTESNERTITSGPSSSSSSHLPYSLFNASPSLFLRIGSWQAVAKNEGDLLLRFDYKNKK

Query:  ISWEIVREGPSRHKI------------------------ELQSPPRFYKEIEIKPLKHFKWEAESDFTGGRASTSRKHFSVFPPGVLGVHYKRLMKNKNL
        ++WEIVREGPS+HKI                        ELQ PPRFYKEIE KP K  KW  ESDFT GRAS +R++F+VF PGVLG HYKRLMKNK+L
Subjt:  ISWEIVREGPSRHKI------------------------ELQSPPRFYKEIEIKPLKHFKWEAESDFTGGRASTSRKHFSVFPPGVLGVHYKRLMKNKNL

Query:  LEVSQKSFPTADSPYFPK
        LEVSQKSFPT  SPYFP+
Subjt:  LEVSQKSFPTADSPYFPK

A0A6J1I0N3 uncharacterized protein LOC1114679121.4e-7064.68Show/hide
Query:  MELKKDTQISMKAPFTNLQNIFNGRSLIPLPPTAEEQQQEYNTESNERTITSGPSSSSSSHLPYSLFNASPSLFLRIGSWQAVAKNEGDLLLRFDYKNKK
        MEL+KDT+IS+  PFTNL +I  G SLIPLPPT+EEQQ  YN  S+ERTITSGPSSSSSS LP  +FN   +LFLR+GSWQ V KN+GDL+L+FDY+NKK
Subjt:  MELKKDTQISMKAPFTNLQNIFNGRSLIPLPPTAEEQQQEYNTESNERTITSGPSSSSSSHLPYSLFNASPSLFLRIGSWQAVAKNEGDLLLRFDYKNKK

Query:  ISWEIVREGPSRHKI------------------------ELQSPPRFYKEIEIKPLKHFKWEAESDFTGGRASTSRKHFSVFPPGVLGVHYKRLMKNKNL
        ++WEIVREGPS+HKI                        ELQ PPRFYKEIE KP K  KW  ESDFT GRAS +R++F+VF PGVLG HYKRLMKNK+L
Subjt:  ISWEIVREGPSRHKI------------------------ELQSPPRFYKEIEIKPLKHFKWEAESDFTGGRASTSRKHFSVFPPGVLGVHYKRLMKNKNL

Query:  LEVSQKSFPTADSPYFPK
        LEVSQKSFPT  SPYFP+
Subjt:  LEVSQKSFPTADSPYFPK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54300.1 unknown protein4.1e-1429.87Show/hide
Query:  PSLFLRIGSWQAVAKNEGDLLLRFDYKNKKISWEIVREGPSRH-------------------------------KIELQSPPRFYKEIEIKPLKHFKW-E
        P   +RIG W  VAKN  D++ +F +  KK+ WE +   P  +                               KIEL+  P F+ E   +  KH +W +
Subjt:  PSLFLRIGSWQAVAKNEGDLLLRFDYKNKKISWEIVREGPSRH-------------------------------KIELQSPPRFYKEIEIKPLKHFKW-E

Query:  AESDFTGGRASTSRKHFSVFPPGVLGVHYKRLMKNKNLLEVSQKSFPTADSPYF
         + DFTG  AS  R+H   FPPGVL  + ++L+ +    ++ +  FP  +S YF
Subjt:  AESDFTGGRASTSRKHFSVFPPGVLGVHYKRLMKNKNLLEVSQKSFPTADSPYF

AT2G24100.1 unknown protein8.8e-1730.14Show/hide
Query:  PSLFLRIGSWQAVAKNEGDLLLRFDYKNKKISWEIVREG-----------------------PSRHKIELQSPPRFYKEIEIKPLKHFKWEAESDFTGGR
        P+  LRIG W+  ++ EGDL+ +  +   K+ WE++ +G                       P    I L   P F++E   +P KH  W+A SDFT G+
Subjt:  PSLFLRIGSWQAVAKNEGDLLLRFDYKNKKISWEIVREG-----------------------PSRHKIELQSPPRFYKEIEIKPLKHFKWEAESDFTGGR

Query:  ASTSRKHFSVFPPGVLGVHYKRLMK-NKNLLEVSQKSFPTADSPYF
        AS +R+HF   PPG++  H+++L++ +  L  +S++      +P+F
Subjt:  ASTSRKHFSVFPPGVLGVHYKRLMK-NKNLLEVSQKSFPTADSPYF

AT3G05770.1 unknown protein3.8e-1225.58Show/hide
Query:  MKAPFTNLQNIFNG-RSLIPLPPTAEEQQQEYNTESNERTITSGPSSSSSSHLPYSLFNASPSLFLRIGSWQAVAKNEGDLLLRFDYKNKKISWEIV---
        +  P T    + N   S + +  T   QQ E +++++  T+   P    + + P S         ++IG    VAKN  D++ +F +  KK+ WE +   
Subjt:  MKAPFTNLQNIFNG-RSLIPLPPTAEEQQQEYNTESNERTITSGPSSSSSSHLPYSLFNASPSLFLRIGSWQAVAKNEGDLLLRFDYKNKKISWEIV---

Query:  ----------------------------REGPSRHKIELQSPPRFYKEIEIKPLKHFKW-EAESDFTGGRASTSRKHFSVFPPGVLGVHYKRLMKNKNLL
                                    R+     KIEL+  P F+ E   +  KH +W + + DFTG +AS  R+H   FPPGVL  + ++L+ +    
Subjt:  ----------------------------REGPSRHKIELQSPPRFYKEIEIKPLKHFKW-EAESDFTGGRASTSRKHFSVFPPGVLGVHYKRLMKNKNLL

Query:  EVSQKSFPTADSPYF
        ++ +  FP  +S YF
Subjt:  EVSQKSFPTADSPYF

AT4G30780.1 unknown protein1.1e-1630.61Show/hide
Query:  PSLFLRIGSWQAVAKNEGDLLLRFDYKNKKISWEIVREGPSRHKIELQ------------------------SPPRFYKEIEIKPLKHFKWEAESDFTGG
        P+  L+IG W+  ++ EGDL+ +  +   K+ WE++ +G  + KIE+Q                          P F++E   +P KH  W+A SDFT G
Subjt:  PSLFLRIGSWQAVAKNEGDLLLRFDYKNKKISWEIVREGPSRHKIELQ------------------------SPPRFYKEIEIKPLKHFKWEAESDFTGG

Query:  RASTSRKHFSVFPPGVLGVHYKRLMK-NKNLLEVSQKSFPTADSPYF
        +AS +R+HF     G++  H+++L++ +  L  +S++     DSPYF
Subjt:  RASTSRKHFSVFPPGVLGVHYKRLMK-NKNLLEVSQKSFPTADSPYF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTAAAAAAGGATACACAAATTTCAATGAAAGCTCCATTTACAAACCTCCAAAATATCTTCAATGGCCGTTCGCTAATCCCTCTCCCTCCCACAGCTGAAGAACA
ACAACAAGAATACAATACTGAATCAAATGAAAGAACAATCACTTCTGGACCAAGCAGCTCTTCCTCTTCTCACCTTCCCTATTCTCTCTTTAATGCTTCTCCTTCCCTTT
TCCTTCGTATTGGATCCTGGCAGGCAGTGGCCAAAAATGAAGGTGATCTGCTCCTGAGATTTGATTACAAAAACAAGAAGATATCTTGGGAGATTGTGAGGGAAGGGCCT
TCTAGGCACAAGATTGAACTGCAATCACCACCAAGATTTTACAAGGAAATTGAAATCAAACCACTGAAGCATTTCAAATGGGAAGCTGAATCTGATTTTACTGGAGGTAG
AGCTTCTACGAGCAGGAAACACTTTTCAGTGTTTCCACCAGGAGTACTTGGTGTACATTATAAGAGACTGATGAAGAACAAGAATTTGTTAGAAGTAAGCCAAAAGTCAT
TTCCAACAGCTGATTCCCCTTATTTCCCCAAGCAT
mRNA sequenceShow/hide mRNA sequence
TTCGTCTCACTTCTCTTCTTGAAGCAATGGAATTAAAAAAGGATACACAAATTTCAATGAAAGCTCCATTTACAAACCTCCAAAATATCTTCAATGGCCGTTCGCTAATC
CCTCTCCCTCCCACAGCTGAAGAACAACAACAAGAATACAATACTGAATCAAATGAAAGAACAATCACTTCTGGACCAAGCAGCTCTTCCTCTTCTCACCTTCCCTATTC
TCTCTTTAATGCTTCTCCTTCCCTTTTCCTTCGTATTGGATCCTGGCAGGCAGTGGCCAAAAATGAAGGTGATCTGCTCCTGAGATTTGATTACAAAAACAAGAAGATAT
CTTGGGAGATTGTGAGGGAAGGGCCTTCTAGGCACAAGATTGAACTGCAATCACCACCAAGATTTTACAAGGAAATTGAAATCAAACCACTGAAGCATTTCAAATGGGAA
GCTGAATCTGATTTTACTGGAGGTAGAGCTTCTACGAGCAGGAAACACTTTTCAGTGTTTCCACCAGGAGTACTTGGTGTACATTATAAGAGACTGATGAAGAACAAGAA
TTTGTTAGAAGTAAGCCAAAAGTCATTTCCAACAGCTGATTCCCCTTATTTCCCCAAGCAT
Protein sequenceShow/hide protein sequence
MELKKDTQISMKAPFTNLQNIFNGRSLIPLPPTAEEQQQEYNTESNERTITSGPSSSSSSHLPYSLFNASPSLFLRIGSWQAVAKNEGDLLLRFDYKNKKISWEIVREGP
SRHKIELQSPPRFYKEIEIKPLKHFKWEAESDFTGGRASTSRKHFSVFPPGVLGVHYKRLMKNKNLLEVSQKSFPTADSPYFPKH