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Lsi06G000680 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G000680
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionF-box protein At2g02240-like
Genome locationchr06:598200..598960
RNA-Seq ExpressionLsi06G000680
SyntenyLsi06G000680
Gene Ontology termsNA
InterPro domainsIPR025886 - Phloem protein 2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135585.1 putative F-box protein PP2-B12 [Cucumis sativus]4.4e-3576.92Show/hide
Query:  NRAYGLNTHPSQATVQLNT-VTSKKKVYLHKEKGYKNHVIINGD-----DED-DGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKP
        +RAYGLNTHPSQAT+QLNT VTSK+KVYLHK++ YKN +I  GD     DED D SW+EIELGEFYV+DSGD +VEMCLKE+ESQHLRGGLVVEGIQL+P
Subjt:  NRAYGLNTHPSQATVQLNT-VTSKKKVYLHKEKGYKNHVIINGD-----DED-DGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKP

Query:  KLKL
        KLKL
Subjt:  KLKL

XP_008450565.1 PREDICTED: putative F-box protein PP2-B12 [Cucumis melo]2.9e-3479.8Show/hide
Query:  NRAYGLNTHPSQAT-VQLNTVTSKKKVYLHKEKGYKNHVIING-DDEDDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPKLKL
        +RAYGLNTHPSQAT +QLNTVTSK+KVYLHK+KGYKN     G +++DD SW+EIELGEFYV DS D VVEMCLKEIESQHLRGGLVVEGIQL+PKLKL
Subjt:  NRAYGLNTHPSQAT-VQLNTVTSKKKVYLHKEKGYKNHVIING-DDEDDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPKLKL

XP_022159649.1 putative F-box protein PP2-B12 isoform X1 [Momordica charantia]1.2e-2968.57Show/hide
Query:  NRAYGLNTHPSQATVQLNTVTSKKKVYLHKEKG------YKNHVIINGDD----EDDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQ
        +RAYGLN HPSQA+VQLNTVTS+++VYL KE+G       KN V+  G D    EDD  WV+IELGEFYVND GDG VEMCLKE+ESQHLRGGLVVEGIQ
Subjt:  NRAYGLNTHPSQATVQLNTVTSKKKVYLHKEKG------YKNHVIINGDD----EDDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQ

Query:  LKPKL
        L+P++
Subjt:  LKPKL

XP_022159650.1 putative F-box protein PP2-B12 isoform X2 [Momordica charantia]1.2e-2968.57Show/hide
Query:  NRAYGLNTHPSQATVQLNTVTSKKKVYLHKEKG------YKNHVIINGDD----EDDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQ
        +RAYGLN HPSQA+VQLNTVTS+++VYL KE+G       KN V+  G D    EDD  WV+IELGEFYVND GDG VEMCLKE+ESQHLRGGLVVEGIQ
Subjt:  NRAYGLNTHPSQATVQLNTVTSKKKVYLHKEKG------YKNHVIINGDD----EDDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQ

Query:  LKPKL
        L+P++
Subjt:  LKPKL

XP_038878695.1 F-box protein PP2-B10-like [Benincasa hispida]7.3e-3883.16Show/hide
Query:  NRAYGLNTHPSQATVQLNTVTSKKKVYLHKEKGYKNHVIINGDDEDDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPKL
        +RAYGLNTHPSQA+VQLNTV SK+KVYLHKEKGYK+ V I+GDD DD +WVEI+LGEFYVNDSG+GVVEMCLKE+ESQHLRGGLVVEGIQL+P L
Subjt:  NRAYGLNTHPSQATVQLNTVTSKKKVYLHKEKGYKNHVIINGDDEDDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPKL

TrEMBL top hitse value%identityAlignment
A0A0A0M1G3 Uncharacterized protein2.1e-3576.92Show/hide
Query:  NRAYGLNTHPSQATVQLNT-VTSKKKVYLHKEKGYKNHVIINGD-----DED-DGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKP
        +RAYGLNTHPSQAT+QLNT VTSK+KVYLHK++ YKN +I  GD     DED D SW+EIELGEFYV+DSGD +VEMCLKE+ESQHLRGGLVVEGIQL+P
Subjt:  NRAYGLNTHPSQATVQLNT-VTSKKKVYLHKEKGYKNHVIINGD-----DED-DGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKP

Query:  KLKL
        KLKL
Subjt:  KLKL

A0A1S3BQI2 putative F-box protein PP2-B121.4e-3479.8Show/hide
Query:  NRAYGLNTHPSQAT-VQLNTVTSKKKVYLHKEKGYKNHVIING-DDEDDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPKLKL
        +RAYGLNTHPSQAT +QLNTVTSK+KVYLHK+KGYKN     G +++DD SW+EIELGEFYV DS D VVEMCLKEIESQHLRGGLVVEGIQL+PKLKL
Subjt:  NRAYGLNTHPSQAT-VQLNTVTSKKKVYLHKEKGYKNHVIING-DDEDDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPKLKL

A0A6J1DZC5 putative F-box protein PP2-B12 isoform X26.0e-3068.57Show/hide
Query:  NRAYGLNTHPSQATVQLNTVTSKKKVYLHKEKG------YKNHVIINGDD----EDDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQ
        +RAYGLN HPSQA+VQLNTVTS+++VYL KE+G       KN V+  G D    EDD  WV+IELGEFYVND GDG VEMCLKE+ESQHLRGGLVVEGIQ
Subjt:  NRAYGLNTHPSQATVQLNTVTSKKKVYLHKEKG------YKNHVIINGDD----EDDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQ

Query:  LKPKL
        L+P++
Subjt:  LKPKL

A0A6J1E2Z2 putative F-box protein PP2-B12 isoform X16.0e-3068.57Show/hide
Query:  NRAYGLNTHPSQATVQLNTVTSKKKVYLHKEKG------YKNHVIINGDD----EDDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQ
        +RAYGLN HPSQA+VQLNTVTS+++VYL KE+G       KN V+  G D    EDD  WV+IELGEFYVND GDG VEMCLKE+ESQHLRGGLVVEGIQ
Subjt:  NRAYGLNTHPSQATVQLNTVTSKKKVYLHKEKG------YKNHVIINGDD----EDDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQ

Query:  LKPKL
        L+P++
Subjt:  LKPKL

A0A6J1JFV9 F-box protein At2g02240-like1.5e-2869.61Show/hide
Query:  NRAYGLNTHPSQATVQLNTVTSKKKVYLHK--EKGYKNHVIIN-GDDEDDG--SWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPKL
        +RAYGL+THPSQA+VQL+ V SK+KVYL+       KN  I+N GDD ++G   WVEIELGEFYVND  DGVVEMCLKE+ESQHLRGGL+VEGIQL PK+
Subjt:  NRAYGLNTHPSQATVQLNTVTSKKKVYLHK--EKGYKNHVIIN-GDDEDDG--SWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPKL

Query:  KL
        KL
Subjt:  KL

SwissProt top hitse value%identityAlignment
O80494 F-box protein PP2-B155.8e-0629.41Show/hide
Query:  NRAYGLNTHPSQATVQ------------LNTVTSKKK-----VYLHKEKGYKNHVIINGDDED----DGSWVEIELGEFYVNDSGDG----VVEMCLKEI
        +RAYGL+  P++ +++            L+ + +KK+      Y  +E+    H ++     +    D  W+EIELGEF    SG+G     V M L E+
Subjt:  NRAYGLNTHPSQATVQ------------LNTVTSKKK-----VYLHKEKGYKNHVIINGDDED----DGSWVEIELGEFYVNDSGDG----VVEMCLKEI

Query:  ESQHLRGGLVVEGIQLKPK
        +   L+GG+ ++GI+++PK
Subjt:  ESQHLRGGLVVEGIQLKPK

Q6NPT8 F-box protein PP2-B14.2e-0432.76Show/hide
Query:  GDDEDDGSWVEIELGEFYVN-----DSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPK
        G  E    W E+ELG+FY+N     D G   +E+ + E ++ + + GL+++GI+++P+
Subjt:  GDDEDDGSWVEIELGEFYVN-----DSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPK

Q9C7J9 F-box protein PP2-B133.4e-0647.92Show/hide
Query:  DDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKP
        DDG W+EIELGEF   +  D  V M L E++   L+GG+V++GI+++P
Subjt:  DDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKP

Q9C7K0 F-box protein VBF2.6e-0646.94Show/hide
Query:  DDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPK
        DDG W+EIELGEF   +  D  V M L E++   L+GG++++GI+++PK
Subjt:  DDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPK

Q9FLU7 Putative F-box protein PP2-B124.2e-0442.31Show/hide
Query:  DDEDDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPK
        +  +DG W+EIELGE+YV    D  +EM + E      +GG++V+GI+++PK
Subjt:  DDEDDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPK

Arabidopsis top hitse value%identityAlignment
AT1G09155.1 phloem protein 2-B154.2e-0729.41Show/hide
Query:  NRAYGLNTHPSQATVQ------------LNTVTSKKK-----VYLHKEKGYKNHVIINGDDED----DGSWVEIELGEFYVNDSGDG----VVEMCLKEI
        +RAYGL+  P++ +++            L+ + +KK+      Y  +E+    H ++     +    D  W+EIELGEF    SG+G     V M L E+
Subjt:  NRAYGLNTHPSQATVQ------------LNTVTSKKK-----VYLHKEKGYKNHVIINGDDED----DGSWVEIELGEFYVNDSGDG----VVEMCLKEI

Query:  ESQHLRGGLVVEGIQLKPK
        +   L+GG+ ++GI+++PK
Subjt:  ESQHLRGGLVVEGIQLKPK

AT1G56240.1 phloem protein 2-B132.4e-0747.92Show/hide
Query:  DDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKP
        DDG W+EIELGEF   +  D  V M L E++   L+GG+V++GI+++P
Subjt:  DDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKP

AT1G56250.1 phloem protein 2-B141.9e-0746.94Show/hide
Query:  DDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPK
        DDG W+EIELGEF   +  D  V M L E++   L+GG++++GI+++PK
Subjt:  DDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPK

AT2G02230.1 phloem protein 2-B13.0e-0532.76Show/hide
Query:  GDDEDDGSWVEIELGEFYVN-----DSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPK
        G  E    W E+ELG+FY+N     D G   +E+ + E ++ + + GL+++GI+++P+
Subjt:  GDDEDDGSWVEIELGEFYVN-----DSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPK

AT5G24560.1 phloem protein 2-B123.0e-0542.31Show/hide
Query:  DDEDDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPK
        +  +DG W+EIELGE+YV    D  +EM + E      +GG++V+GI+++PK
Subjt:  DDEDDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAGAGCTTATGGATTAAACACTCACCCATCTCAAGCCACAGTACAACTTAACACTGTGACGTCTAAAAAAAAAGTGTATTTGCACAAGGAAAAAGGCTACAAGAA
TCATGTTATCATTAATGGAGATGATGAAGATGATGGGAGTTGGGTCGAGATCGAGTTGGGGGAGTTTTACGTTAATGATTCCGGGGACGGCGTCGTAGAGATGTGCTTGA
AAGAAATTGAGAGCCAACATTTGAGAGGTGGTCTTGTTGTTGAGGGAATTCAACTTAAACCTAAATTGAAACTATAA
mRNA sequenceShow/hide mRNA sequence
ATGAACAGAGCTTATGGATTAAACACTCACCCATCTCAAGCCACAGTACAACTTAACACTGTGACGTCTAAAAAAAAAGTGTATTTGCACAAGGAAAAAGGCTACAAGAA
TCATGTTATCATTAATGGAGATGATGAAGATGATGGGAGTTGGGTCGAGATCGAGTTGGGGGAGTTTTACGTTAATGATTCCGGGGACGGCGTCGTAGAGATGTGCTTGA
AAGAAATTGAGAGCCAACATTTGAGAGGTGGTCTTGTTGTTGAGGGAATTCAACTTAAACCTAAATTGAAACTATAA
Protein sequenceShow/hide protein sequence
MNRAYGLNTHPSQATVQLNTVTSKKKVYLHKEKGYKNHVIINGDDEDDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPKLKL