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Lsi06G000990 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G000990
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein RALF-like 9
Genome locationchr06:999832..1000083
RNA-Seq ExpressionLsi06G000990
SyntenyLsi06G000990
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650705.1 hypothetical protein Csa_010421 [Cucumis sativus]5.8e-2062.5Show/hide
Query:  MIEIINARKYIDFGPL-KGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCRKGNDITDGVEEIAKGDASTSPTMSSNKE
        MI I NA+K+ID+G +  GDVSPGCS  HPELC++  ANPY+RGCN I+RCR+GNDI D  EE  +GDAS SP++S N E
Subjt:  MIEIINARKYIDFGPL-KGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCRKGNDITDGVEEIAKGDASTSPTMSSNKE

PNX70961.1 hypothetical protein L195_g057917 [Trifolium pratense]6.4e-1152.24Show/hide
Query:  INARKYIDFGPLKGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCRKGNDITDGVEEIAKGDASTS
        + A+K+I +G +  D+SPGCS KHPELCK  PANPYRRGC A  RCR G       EE  + D   S
Subjt:  INARKYIDFGPLKGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCRKGNDITDGVEEIAKGDASTS

XP_022136918.1 uncharacterized protein LOC111008495 [Momordica charantia]1.4e-1364.71Show/hide
Query:  MIEIINARKYIDFGPLKGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCRKGNDITDGVEEIAKGDA
        MIEI NA +YI++  LK DVSPGCS KHP LCKL  AN Y+RGC+AINRCR+ +D  D  E+I KGDA
Subjt:  MIEIINARKYIDFGPLKGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCRKGNDITDGVEEIAKGDA

XP_022159360.1 uncharacterized protein LOC111025777 [Momordica charantia]1.2e-1757.69Show/hide
Query:  MIEIINARKYIDFGPLKGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCRKGNDITDGVEEIAKGDASTSPTMSSNK
        MI+I NA ++I + PL+GDVSPGCS  HPELCKL  ANPY+RGC +I+RCR G+DI D  E I +GDA      S  K
Subjt:  MIEIINARKYIDFGPLKGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCRKGNDITDGVEEIAKGDASTSPTMSSNK

XP_022961577.1 protein RALF-like 9 [Cucurbita moschata]4.9e-1157.81Show/hide
Query:  MIEIINARKYIDFGPLKGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCR--KGNDITDGVEE
        MIEI NA  YI++ PLK +    CS  HP+LCK TPANPY+RGCN I+RCR  + +DI D  EE
Subjt:  MIEIINARKYIDFGPLKGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCR--KGNDITDGVEE

TrEMBL top hitse value%identityAlignment
A0A0A0L8B1 Uncharacterized protein1.3e-2063.75Show/hide
Query:  MIEIINARKYIDFGPL-KGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCRKGNDITDGVEEIAKGDASTSPTMSSNKE
        MI I NARK+ID+G +  GDVSPGCS  HPELC++  ANPY+RGCN I+RCR+GNDI D  EE  +GDAS SP++S N E
Subjt:  MIEIINARKYIDFGPL-KGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCRKGNDITDGVEEIAKGDASTSPTMSSNKE

A0A6J1C8U5 uncharacterized protein LOC1110084956.7e-1464.71Show/hide
Query:  MIEIINARKYIDFGPLKGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCRKGNDITDGVEEIAKGDA
        MIEI NA +YI++  LK DVSPGCS KHP LCKL  AN Y+RGC+AINRCR+ +D  D  E+I KGDA
Subjt:  MIEIINARKYIDFGPLKGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCRKGNDITDGVEEIAKGDA

A0A6J1DYH7 uncharacterized protein LOC1110257775.9e-1857.69Show/hide
Query:  MIEIINARKYIDFGPLKGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCRKGNDITDGVEEIAKGDASTSPTMSSNK
        MI+I NA ++I + PL+GDVSPGCS  HPELCKL  ANPY+RGC +I+RCR G+DI D  E I +GDA      S  K
Subjt:  MIEIINARKYIDFGPLKGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCRKGNDITDGVEEIAKGDASTSPTMSSNK

A0A6J1HAJ8 protein RALF-like 92.4e-1157.81Show/hide
Query:  MIEIINARKYIDFGPLKGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCR--KGNDITDGVEE
        MIEI NA  YI++ PLK +    CS  HP+LCK TPANPY+RGCN I+RCR  + +DI D  EE
Subjt:  MIEIINARKYIDFGPLKGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCR--KGNDITDGVEE

A0A6J1JNY3 auxin-induced in root cultures protein 12-like3.1e-1146.43Show/hide
Query:  INARKYIDFGPLKGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCRKGNDITDGVEEI---------AKGDASTSPTMSSNKE
        I  + +I++  +K DVSPGCS KHP LCK   AN Y+RGCNAIN+CR G+DI + VE+I         ++G A T   +   KE
Subjt:  INARKYIDFGPLKGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCRKGNDITDGVEEI---------AKGDASTSPTMSSNKE

SwissProt top hitse value%identityAlignment
A8MQM2 Protein RALF-like 62.2e-0646.51Show/hide
Query:  YIDFGPLKGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCRK
        YI++  +KGD+ PGCS K+P+ C   PA  Y RGC    RC++
Subjt:  YIDFGPLKGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCRK

A8MQM7 Protein RALF-like 151.7e-0646.94Show/hide
Query:  INARKYIDF-GPLKGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCRK
        + A +YI + G   GD +  C + HP  CK   ANPYRRGC  I RCR+
Subjt:  INARKYIDF-GPLKGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCRK

A8MQP2 Protein RALF-like 291.0e-0643.1Show/hide
Query:  IEIINARKYIDFGPLKGDVSPGCSRKHPELC--KLTPANPYRRGCNAINRCRKGNDIT
        I  I+A++YI++ P++ D+  GC  + P     K TPANPYRR C   NRCR+    T
Subjt:  IEIINARKYIDFGPLKGDVSPGCSRKHPELC--KLTPANPYRRGCNAINRCRKGNDIT

A8MRD4 Protein RALF-like 71.2e-0439.22Show/hide
Query:  KYIDFGPLKGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCRKGNDITDG
        K I++  L  D  PGC+ K+P+ C   PAN Y RGC    RC +    + G
Subjt:  KYIDFGPLKGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCRKGNDITDG

Q3ECL0 Protein RALF-like 94.5e-0746Show/hide
Query:  INARKYIDFGPL-KGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCRKG
        + A +YI +  + +GD +  C + HP  CK   ANPY+RGC  INRCR G
Subjt:  INARKYIDFGPL-KGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCRKG

Arabidopsis top hitse value%identityAlignment
AT1G60625.1 RALF-like 61.6e-0746.51Show/hide
Query:  YIDFGPLKGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCRK
        YI++  +KGD+ PGCS K+P+ C   PA  Y RGC    RC++
Subjt:  YIDFGPLKGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCRK

AT1G60815.1 RALF-like 78.7e-0639.22Show/hide
Query:  KYIDFGPLKGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCRKGNDITDG
        K I++  L  D  PGC+ K+P+ C   PAN Y RGC    RC +    + G
Subjt:  KYIDFGPLKGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCRKGNDITDG

AT1G61566.1 ralf-like 93.2e-0846Show/hide
Query:  INARKYIDFGPL-KGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCRKG
        + A +YI +  + +GD +  C + HP  CK   ANPY+RGC  INRCR G
Subjt:  INARKYIDFGPL-KGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCRKG

AT2G22055.1 RALF-like 151.2e-0746.94Show/hide
Query:  INARKYIDF-GPLKGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCRK
        + A +YI + G   GD +  C + HP  CK   ANPYRRGC  I RCR+
Subjt:  INARKYIDF-GPLKGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCRK

AT4G11653.1 RALF-like 297.1e-0843.1Show/hide
Query:  IEIINARKYIDFGPLKGDVSPGCSRKHPELC--KLTPANPYRRGCNAINRCRKGNDIT
        I  I+A++YI++ P++ D+  GC  + P     K TPANPYRR C   NRCR+    T
Subjt:  IEIINARKYIDFGPLKGDVSPGCSRKHPELC--KLTPANPYRRGCNAINRCRKGNDIT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGAGATAATAAATGCAAGGAAATACATTGATTTTGGTCCTTTAAAAGGAGATGTTAGTCCTGGATGTAGCCGAAAGCATCCTGAACTTTGTAAATTAACTCCTGC
AAATCCATATCGAAGAGGTTGCAATGCTATCAACCGCTGCAGGAAAGGAAATGATATTACAGATGGTGTAGAAGAAATTGCTAAAGGGGATGCTTCCACTAGCCCGACAA
TGAGCTCTAATAAAGAATACCATCTCTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGAGATAATAAATGCAAGGAAATACATTGATTTTGGTCCTTTAAAAGGAGATGTTAGTCCTGGATGTAGCCGAAAGCATCCTGAACTTTGTAAATTAACTCCTGC
AAATCCATATCGAAGAGGTTGCAATGCTATCAACCGCTGCAGGAAAGGAAATGATATTACAGATGGTGTAGAAGAAATTGCTAAAGGGGATGCTTCCACTAGCCCGACAA
TGAGCTCTAATAAAGAATACCATCTCTACTGA
Protein sequenceShow/hide protein sequence
MIEIINARKYIDFGPLKGDVSPGCSRKHPELCKLTPANPYRRGCNAINRCRKGNDITDGVEEIAKGDASTSPTMSSNKEYHLY