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Lsi06G001010 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G001010
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein RALF-like 9
Genome locationchr06:1006295..1011284
RNA-Seq ExpressionLsi06G001010
SyntenyLsi06G001010
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650705.1 hypothetical protein Csa_010421 [Cucumis sativus]2.5e-2564.89Show/hide
Query:  ITLVFIGILLVNFDMIEITNTRKYIGYGPL-KGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCRGRNDIIDGVEEIAKGDASTRPTMSPNEE
        +TLVFIGILLV+FDMI ITN +K+I YG +  GDVSPGCS  HP+LC++  ANPY+RGCN I+RCR  NDIID  EE  +GDAS  P++SPN E
Subjt:  ITLVFIGILLVNFDMIEITNTRKYIGYGPL-KGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCRGRNDIIDGVEEIAKGDASTRPTMSPNEE

XP_022136918.1 uncharacterized protein LOC111008495 [Momordica charantia]2.7e-1968.67Show/hide
Query:  GITLVFIGILLVNFDMIEITNTRKYIGYGPLKGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCRGRNDIIDGVEEIAKGDA
        G  LVFIGILLV+F MIEITN  +YI Y  LK DVSPGCS KHP LCKL  AN Y+RGC+AI RCR R+D ID  E+I KGDA
Subjt:  GITLVFIGILLVNFDMIEITNTRKYIGYGPLKGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCRGRNDIIDGVEEIAKGDA

XP_022159360.1 uncharacterized protein LOC111025777 [Momordica charantia]2.8e-2158.14Show/hide
Query:  GITLVFIGILLVNFDMIEITNTRKYIGYGPLKGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCRGRNDIIDGVEEIAKGDASTR
        G   +F+GILL    MI+ITN  ++I Y PL+GDVSPGCS  HP+LCKL  ANPY+RGC +I+RCRG +DIID  E I +GDA  +
Subjt:  GITLVFIGILLVNFDMIEITNTRKYIGYGPLKGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCRGRNDIIDGVEEIAKGDASTR

XP_022961577.1 protein RALF-like 9 [Cucurbita moschata]3.0e-1546.36Show/hide
Query:  GITLVFIGILLVNFDMIEITNTRKYIGYGPLKGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCRG--RNDIIDGVEEIAKG--------------DAS
        G  ++FI +L V+ +MIEITN   YI Y PLK +    CS  HP LCK TPANPY+RGCN I+RCRG   +DIID  EE                  D +
Subjt:  GITLVFIGILLVNFDMIEITNTRKYIGYGPLKGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCRG--RNDIIDGVEEIAKG--------------DAS

Query:  TRPTMSPNEE
        + P +SPN E
Subjt:  TRPTMSPNEE

XP_023546462.1 protein RALF-like 9 [Cucurbita pepo subsp. pepo]4.4e-1445.87Show/hide
Query:  LVFIGILLVNFDMIEITNTRKYIGYGPLKGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCRG--RNDIIDGVEE--IAKGDA-------------STR
        ++FI +L V+ +MIEITN   YI Y PLK +    CS  HP LCK  PANPY+RGCN I+RCRG   +DIID  EE  I   D              ++ 
Subjt:  LVFIGILLVNFDMIEITNTRKYIGYGPLKGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCRG--RNDIIDGVEE--IAKGDA-------------STR

Query:  PTMSPNEEY
        P +SPN E+
Subjt:  PTMSPNEEY

TrEMBL top hitse value%identityAlignment
A0A0A0L8B1 Uncharacterized protein5.4e-2665.96Show/hide
Query:  ITLVFIGILLVNFDMIEITNTRKYIGYGPL-KGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCRGRNDIIDGVEEIAKGDASTRPTMSPNEE
        +TLVFIGILLV+FDMI ITN RK+I YG +  GDVSPGCS  HP+LC++  ANPY+RGCN I+RCR  NDIID  EE  +GDAS  P++SPN E
Subjt:  ITLVFIGILLVNFDMIEITNTRKYIGYGPL-KGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCRGRNDIIDGVEEIAKGDASTRPTMSPNEE

A0A2K3KXF8 Uncharacterized protein5.8e-1254.69Show/hide
Query:  LVFIGILLVNFDMIEITNTRKYIGYGPLKGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCRG
        +VF+  LL+     +    +K+IGYG +  D+SPGCS KHP+LCK  PANPYRRGC A  RCRG
Subjt:  LVFIGILLVNFDMIEITNTRKYIGYGPLKGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCRG

A0A6J1C8U5 uncharacterized protein LOC1110084951.3e-1968.67Show/hide
Query:  GITLVFIGILLVNFDMIEITNTRKYIGYGPLKGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCRGRNDIIDGVEEIAKGDA
        G  LVFIGILLV+F MIEITN  +YI Y  LK DVSPGCS KHP LCKL  AN Y+RGC+AI RCR R+D ID  E+I KGDA
Subjt:  GITLVFIGILLVNFDMIEITNTRKYIGYGPLKGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCRGRNDIIDGVEEIAKGDA

A0A6J1DYH7 uncharacterized protein LOC1110257771.4e-2158.14Show/hide
Query:  GITLVFIGILLVNFDMIEITNTRKYIGYGPLKGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCRGRNDIIDGVEEIAKGDASTR
        G   +F+GILL    MI+ITN  ++I Y PL+GDVSPGCS  HP+LCKL  ANPY+RGC +I+RCRG +DIID  E I +GDA  +
Subjt:  GITLVFIGILLVNFDMIEITNTRKYIGYGPLKGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCRGRNDIIDGVEEIAKGDASTR

A0A6J1HAJ8 protein RALF-like 91.5e-1546.36Show/hide
Query:  GITLVFIGILLVNFDMIEITNTRKYIGYGPLKGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCRG--RNDIIDGVEEIAKG--------------DAS
        G  ++FI +L V+ +MIEITN   YI Y PLK +    CS  HP LCK TPANPY+RGCN I+RCRG   +DIID  EE                  D +
Subjt:  GITLVFIGILLVNFDMIEITNTRKYIGYGPLKGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCRG--RNDIIDGVEEIAKG--------------DAS

Query:  TRPTMSPNEE
        + P +SPN E
Subjt:  TRPTMSPNEE

SwissProt top hitse value%identityAlignment
A8MQL7 Protein RALF-like 202.0e-0639.66Show/hide
Query:  LLVNFDMIEITNTRKYIGYGPLKGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCRG
        L++   ++  T   K IG   ++ D   GC    P  CK+ PANPY+ GC A +RCRG
Subjt:  LLVNFDMIEITNTRKYIGYGPLKGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCRG

A8MQM2 Protein RALF-like 67.0e-0736.92Show/hide
Query:  ITLVFIGILLVNFDMIEITNTRKYIGYGPLKGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCR
        I + F+ ++++          + YI Y  +KGD+ PGCS K+PK C   PA  Y RGC    RC+
Subjt:  ITLVFIGILLVNFDMIEITNTRKYIGYGPLKGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCR

A8MQM7 Protein RALF-like 151.2e-0643.08Show/hide
Query:  VFIGILLVNFDMIEITNTR--KYIGY-GPLKGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCR
        V + + L+ F  +  T     +YI Y G   GD +  C + HP  CK   ANPYRRGC  IERCR
Subjt:  VFIGILLVNFDMIEITNTR--KYIGY-GPLKGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCR

A8MRM1 Protein RALF-like 161.3e-0539.06Show/hide
Query:  ITLVFIGILLVNFDMIEITNTRKYIGYGPLKGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERC
        I  +F  ++LV F +   +   + +GYG +KGD  P C  K+P  C   P N Y RGC  I RC
Subjt:  ITLVFIGILLVNFDMIEITNTRKYIGYGPLKGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERC

Q3ECL0 Protein RALF-like 92.7e-0640.91Show/hide
Query:  VFIGILLVNFDMIEITNTR--KYIGYGPL-KGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCRG
        V + + LV F  +  T     +YI Y  + +GD +  C + HP  CK   ANPY+RGC  I RCRG
Subjt:  VFIGILLVNFDMIEITNTR--KYIGYGPL-KGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCRG

Arabidopsis top hitse value%identityAlignment
AT1G60625.1 RALF-like 65.0e-0836.92Show/hide
Query:  ITLVFIGILLVNFDMIEITNTRKYIGYGPLKGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCR
        I + F+ ++++          + YI Y  +KGD+ PGCS K+PK C   PA  Y RGC    RC+
Subjt:  ITLVFIGILLVNFDMIEITNTRKYIGYGPLKGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCR

AT1G61566.1 ralf-like 91.9e-0740.91Show/hide
Query:  VFIGILLVNFDMIEITNTR--KYIGYGPL-KGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCRG
        V + + LV F  +  T     +YI Y  + +GD +  C + HP  CK   ANPY+RGC  I RCRG
Subjt:  VFIGILLVNFDMIEITNTR--KYIGYGPL-KGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCRG

AT2G22055.1 RALF-like 158.5e-0843.08Show/hide
Query:  VFIGILLVNFDMIEITNTR--KYIGY-GPLKGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCR
        V + + L+ F  +  T     +YI Y G   GD +  C + HP  CK   ANPYRRGC  IERCR
Subjt:  VFIGILLVNFDMIEITNTR--KYIGY-GPLKGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCR

AT2G32835.1 RALF-like 169.4e-0739.06Show/hide
Query:  ITLVFIGILLVNFDMIEITNTRKYIGYGPLKGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERC
        I  +F  ++LV F +   +   + +GYG +KGD  P C  K+P  C   P N Y RGC  I RC
Subjt:  ITLVFIGILLVNFDMIEITNTRKYIGYGPLKGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERC

AT2G34825.1 RALF-like 201.5e-0739.66Show/hide
Query:  LLVNFDMIEITNTRKYIGYGPLKGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCRG
        L++   ++  T   K IG   ++ D   GC    P  CK+ PANPY+ GC A +RCRG
Subjt:  LLVNFDMIEITNTRKYIGYGPLKGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGGAATCACACTTGTTTTTATTGGAATTCTCTTGGTTAACTTTGACATGATTGAGATAACAAATACAAGAAAATACATTGGTTATGGTCCTTTAAAAGGAGATGT
TAGTCCTGGATGTAGCCGAAAGCATCCTAAACTTTGTAAATTAACTCCTGCAAATCCATATCGAAGAGGTTGCAATGCAATCGAACGTTGCAGGGGAAGAAATGATATTA
TAGATGGTGTAGAAGAAATTGCTAAAGGGGATGCTTCCACTAGGCCAACAATGAGCCCGAATGAAGAATACCATCTAGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGGGAATCACACTTGTTTTTATTGGAATTCTCTTGGTTAACTTTGACATGATTGAGATAACAAATACAAGAAAATACATTGGTTATGGTCCTTTAAAAGGAGATGT
TAGTCCTGGATGTAGCCGAAAGCATCCTAAACTTTGTAAATTAACTCCTGCAAATCCATATCGAAGAGGTTGCAATGCAATCGAACGTTGCAGGGGAAGAAATGATATTA
TAGATGGTGTAGAAGAAATTGCTAAAGGGGATGCTTCCACTAGGCCAACAATGAGCCCGAATGAAGAATACCATCTAGACTGA
Protein sequenceShow/hide protein sequence
MWGITLVFIGILLVNFDMIEITNTRKYIGYGPLKGDVSPGCSRKHPKLCKLTPANPYRRGCNAIERCRGRNDIIDGVEEIAKGDASTRPTMSPNEEYHLD