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Lsi06G001050 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G001050
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionBTB-POZ and MATH domain 2
Genome locationchr06:1026293..1027176
RNA-Seq ExpressionLsi06G001050
SyntenyLsi06G001050
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA0395685.1 unnamed protein product [Arabidopsis thaliana]1.5e-1159.42Show/hide
Query:  ETNPQRANTKAMAFTPFILSWKNITARIGTTGKANVLITLENNEVTSKISPNKPMEETCHATAVQTRVI
        E  PQ A    + F PFILSWK ITA+IGTTG    LI  EN E +SKISP  PME TC  TAV TR I
Subjt:  ETNPQRANTKAMAFTPFILSWKNITARIGTTGKANVLITLENNEVTSKISPNKPMEETCHATAVQTRVI

EXC50736.1 hypothetical protein L484_000382 [Morus notabilis]2.2e-0751.67Show/hide
Query:  AMAFTPFILSWKNITARIGTTGKANVLITLENNEVTSKISPNKPMEETCHATAVQTRVIT
        A+   P ILSWK ITA+ GTTGK   L+TLE +E TS++SP  P+ ++CH  AV  +V+T
Subjt:  AMAFTPFILSWKNITARIGTTGKANVLITLENNEVTSKISPNKPMEETCHATAVQTRVIT

GER49414.1 BTB-POZ and MATH domain 2 [Striga asiatica]6.4e-0752.54Show/hide
Query:  AMAFTPFILSWKNITARIGTTGKANVLITLENNEVTSKISPNKPMEETCHATAVQTRVI
        A  FTPF+LSWK     IG T    VL+T E +E T+KI P  P E+TCH TAVQT  +
Subjt:  AMAFTPFILSWKNITARIGTTGKANVLITLENNEVTSKISPNKPMEETCHATAVQTRVI

KAF5760321.1 hypothetical protein HanXRQr2_Chr16g0752111 [Helianthus annuus]7.3e-1158.73Show/hide
Query:  ANTKAMAFTPFILSWKNITARIGTTGKANVLITLENNEVTSKISPNKPMEETCHATAVQTRVI
        AN  A+ FTPFI SWKN TA+ GT G   VLIT ENN+ TS I P +P+E+ CH TAV T+ I
Subjt:  ANTKAMAFTPFILSWKNITARIGTTGKANVLITLENNEVTSKISPNKPMEETCHATAVQTRVI

NP_001329273.1 hypothetical protein AT4G18215, partial [Arabidopsis thaliana]8.9e-0959.32Show/hide
Query:  ETNPQRANTKAMAFTPFILSWKNITARIGTTGKANVLITLENNEVTSKISPNKPMEETC
        E  PQ A    + F PFILSWK ITA+IGTTG    LI  EN E +SKISP  PME TC
Subjt:  ETNPQRANTKAMAFTPFILSWKNITARIGTTGKANVLITLENNEVTSKISPNKPMEETC

TrEMBL top hitse value%identityAlignment
A0A1P8B771 Uncharacterized protein (Fragment)4.3e-0959.32Show/hide
Query:  ETNPQRANTKAMAFTPFILSWKNITARIGTTGKANVLITLENNEVTSKISPNKPMEETC
        E  PQ A    + F PFILSWK ITA+IGTTG    LI  EN E +SKISP  PME TC
Subjt:  ETNPQRANTKAMAFTPFILSWKNITARIGTTGKANVLITLENNEVTSKISPNKPMEETC

A0A565BJ15 Uncharacterized protein6.9e-0750.82Show/hide
Query:  MMETNPQRANTKAMAFTPFILSWKNITARIGTTGKANVLITLENNEVTSKISPNKPMEETC
        +++  PQ A    + F PFILSWK +TARIGTTG    LI  EN   + KISP  PM  TC
Subjt:  MMETNPQRANTKAMAFTPFILSWKNITARIGTTGKANVLITLENNEVTSKISPNKPMEETC

A0A5A7QVX2 BTB-POZ and MATH domain 23.1e-0752.54Show/hide
Query:  AMAFTPFILSWKNITARIGTTGKANVLITLENNEVTSKISPNKPMEETCHATAVQTRVI
        A  FTPF+LSWK     IG T    VL+T E +E T+KI P  P E+TCH TAVQT  +
Subjt:  AMAFTPFILSWKNITARIGTTGKANVLITLENNEVTSKISPNKPMEETCHATAVQTRVI

A0A654FQX5 Uncharacterized protein7.1e-1259.42Show/hide
Query:  ETNPQRANTKAMAFTPFILSWKNITARIGTTGKANVLITLENNEVTSKISPNKPMEETCHATAVQTRVI
        E  PQ A    + F PFILSWK ITA+IGTTG    LI  EN E +SKISP  PME TC  TAV TR I
Subjt:  ETNPQRANTKAMAFTPFILSWKNITARIGTTGKANVLITLENNEVTSKISPNKPMEETCHATAVQTRVI

W9SMF6 Uncharacterized protein1.1e-0751.67Show/hide
Query:  AMAFTPFILSWKNITARIGTTGKANVLITLENNEVTSKISPNKPMEETCHATAVQTRVIT
        A+   P ILSWK ITA+ GTTGK   L+TLE +E TS++SP  P+ ++CH  AV  +V+T
Subjt:  AMAFTPFILSWKNITARIGTTGKANVLITLENNEVTSKISPNKPMEETCHATAVQTRVIT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAAACAAATCCCCAAAGAGCCAACACTAAAGCCATGGCCTTCACCCCATTCATTTTGTCATGGAAAAATATCACTGCAAGAATTGGAACCACAGGCAAAGCCAA
TGTGCTAATCACATTAGAGAATAATGAAGTTACCTCAAAAATCAGCCCCAACAAACCAATGGAGGAGACCTGCCATGCCACCGCAGTCCAAACCAGAGTCATAACATAG
mRNA sequenceShow/hide mRNA sequence
ATGATGGAAACAAATCCCCAAAGAGCCAACACTAAAGCCATGGCCTTCACCCCATTCATTTTGTCATGGAAAAATATCACTGCAAGAATTGGAACCACAGGCAAAGCCAA
TGTGCTAATCACATTAGAGAATAATGAAGTTACCTCAAAAATCAGCCCCAACAAACCAATGGAGGAGACCTGCCATGCCACCGCAGTCCAAACCAGAGTCATAACATAG
Protein sequenceShow/hide protein sequence
MMETNPQRANTKAMAFTPFILSWKNITARIGTTGKANVLITLENNEVTSKISPNKPMEETCHATAVQTRVIT