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Lsi06G001070 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G001070
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionHIG1 domain-containing protein
Genome locationchr06:1037003..1039249
RNA-Seq ExpressionLsi06G001070
SyntenyLsi06G001070
Gene Ontology termsGO:0033617 - mitochondrial respiratory chain complex IV assembly (biological process)
GO:0005746 - mitochondrial respirasome (cellular component)
GO:0031305 - integral component of mitochondrial inner membrane (cellular component)
InterPro domainsIPR007667 - Hypoxia induced protein, domain
IPR040153 - Respiratory supercomplex factor 2, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135606.1 uncharacterized protein LOC101204590 [Cucumis sativus]7.3e-4697.96Show/hide
Query:  MAESKGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD
        MAE KGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHK+
Subjt:  MAESKGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD
XP_022145879.1 uncharacterized protein LOC111015231 [Momordica charantia]1.9e-4698.98Show/hide
Query:  MAESKGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD
        MAESKGKLESLR+WVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD
Subjt:  MAESKGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD
XP_022924720.1 uncharacterized protein LOC111432132 [Cucurbita moschata]1.6e-4597.96Show/hide
Query:  MAESKGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD
        MAESKGKLESLR+WVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYS KD
Subjt:  MAESKGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD
XP_022961523.1 uncharacterized protein LOC111462074 [Cucurbita moschata]2.5e-4697.96Show/hide
Query:  MAESKGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD
        MAESKGKLESLR+WVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLP+DNYSHKD
Subjt:  MAESKGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD
XP_022968827.1 uncharacterized protein LOC111467946 [Cucurbita maxima]1.6e-4596.94Show/hide
Query:  MAESKGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD
        MAESKGKLESL++WVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSG KAERYAKFLPIDNYSHKD
Subjt:  MAESKGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD
TrEMBL top hitse value%identityAlignment
A0A0A0LYG3 HIG1 domain-containing protein3.5e-4697.96Show/hide
Query:  MAESKGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD
        MAE KGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHK+
Subjt:  MAESKGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD
A0A1S3BP02 uncharacterized protein LOC1034921553.5e-4697.96Show/hide
Query:  MAESKGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD
        MAE KGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHK+
Subjt:  MAESKGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD
A0A5D3CE77 HIG_1_N domain-containing protein3.5e-4697.96Show/hide
Query:  MAESKGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD
        MAE KGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHK+
Subjt:  MAESKGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD
A0A6J1CWJ8 uncharacterized protein LOC1110152319.3e-4798.98Show/hide
Query:  MAESKGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD
        MAESKGKLESLR+WVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD
Subjt:  MAESKGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD
A0A6J1HC22 uncharacterized protein LOC1114620741.2e-4697.96Show/hide
Query:  MAESKGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD
        MAESKGKLESLR+WVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLP+DNYSHKD
Subjt:  MAESKGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05550.1 Hypoxia-responsive family protein7.8e-3879.59Show/hide
Query:  MAESKGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD
        M ESK K E +R WVS+HKLRTVG LWLSGI GSIAYNWSQP MKTSVKIIHARLHAQALTLAALAGAAVVEYY+HK+ A   RY KFLP +N SHKD
Subjt:  MAESKGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD
AT5G27760.1 Hypoxia-responsive family protein1.2e-3375.27Show/hide
Query:  MAESKGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDN
        MAE K K+  +R+W+ EHKLRTVG LWLSGI+GSIAYNWS+P MKTSV+IIHARLHAQALTLAALAGAA VEYY+HKSGA  +R  KFL  DN
Subjt:  MAESKGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAATCCAAGGGCAAACTCGAATCCCTCAGGGACTGGGTTTCCGAGCACAAGCTTCGCACCGTCGGGTCTCTGTGGCTTAGCGGGATTGCGGGTTCTATTGCGTA
CAATTGGTCTCAACCGAATATGAAGACCAGCGTGAAGATCATCCACGCTAGGTTACACGCACAGGCTTTGACCTTAGCTGCTCTTGCTGGTGCTGCAGTTGTTGAATATT
ATGAACACAAATCAGGAGCTAAGGCCGAGCGATACGCCAAGTTCCTTCCCATTGATAACTACTCACACAAGGACTAA
mRNA sequenceShow/hide mRNA sequence
CTGAGGCTGAGCTACGTGGTTTCGTTCTCCCCCGCCCGCCGCCCACCGATTTTCAAGCGTTGGCAAATTCGACTTTTCCTCCTTCCTTCTATAAATCTTACGCTATAAAT
TCGCCATTCTTCTCCCAATACCCGAAACCTCCGTACTTTTCCCTCCTTCTTCTCTCCTCTTTCTCTTCATATTCCTTCGCCGATTTCTGTCCCCGTCATCCATGGCTGAA
TCCAAGGGCAAACTCGAATCCCTCAGGGACTGGGTTTCCGAGCACAAGCTTCGCACCGTCGGGTCTCTGTGGCTTAGCGGGATTGCGGGTTCTATTGCGTACAATTGGTC
TCAACCGAATATGAAGACCAGCGTGAAGATCATCCACGCTAGGTTACACGCACAGGCTTTGACCTTAGCTGCTCTTGCTGGTGCTGCAGTTGTTGAATATTATGAACACA
AATCAGGAGCTAAGGCCGAGCGATACGCCAAGTTCCTTCCCATTGATAACTACTCACACAAGGACTAAGTTCTTTTTTTTTTTTTTTTCCTTTTTTTCTCTCATTCTACA
CTGGAGGGTAATAAAGTAGTTTCATTCTGAGGCTTAGTATTCTTACTGCTCCATTCTTTTTTAGTTTTATTTTTACTAATTTGGCAAATATCAATACTTGGGGGCGTTAT
TCTGTTCAATTCATAAAAGAAATTTCTTTGTAAACATTGAGATGAGTGCTCTTGTATTATGAATCTGTTCCATTTGGTCTCAGTTTTCTTTTGAGAGGCTTTT
Protein sequenceShow/hide protein sequence
MAESKGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD